Search TFs
or Genes
Construction
and Validation
Optimal
Promoter Size
Download Citation and
Contact

PPDPF


EntrezDescriptionChrom.StrandPromoter
(Start - Stop)
TSS
79144 pancreatic progenitor cell differentiation and proliferation factor homolog (zebrafish) chr20 +62147132 - 62152632 62152132

Transcription Factor Binding Sites

 
Download all TFBS in the PPDPF promoter
 
MotifSourceStrandStartStop PValueMatch
Sequence
Overlap w/
Footprints
CTCF_MA0139.1 JASPAR - 62151574 62151592 8.0E-06 CTGCCCGCAGGGGGCGGTG 19
Zfp652_C2H2_DBD_monomeric_13_1 SELEX - 62151883 62151895 4.0E-06 TGCAGGGGTTAAA 13
KLF14_C2H2_DBD_monomeric_14_1 SELEX - 62152014 62152027 6.0E-06 GGCCCCGCCCCTTT 14
ERG_ETS_full_dimeric_14_1 SELEX - 62151250 62151263 8.0E-06 TACGGAAATCCCGT 14
Tcfcp2l1_MA0145.1 JASPAR - 62152468 62152481 2.0E-06 CCAGCCCAAACCGG 14
REL_MA0101.1 JASPAR + 62151251 62151260 6.0E-06 CGGGATTTCC 10
RELA_MA0107.1 JASPAR + 62151251 62151260 8.0E-06 CGGGATTTCC 10
SP4_C2H2_full_monomeric_17_1 SELEX - 62152013 62152029 4.0E-06 CCGGCCCCGCCCCTTTC 17
REST_MA0138.2 JASPAR + 62150929 62150949 1.0E-06 TGCAGGGCCCAGGACAGCGCC 21
NRF1_NRF_full_dimeric_12_1 SELEX + 62152107 62152118 8.0E-06 CGCGCGTGCGCA 12
NRF1_NRF_full_dimeric_12_1 SELEX - 62152107 62152118 7.0E-06 TGCGCACGCGCG 12
RARG_nuclearreceptor_full_dimeric_16_1 SELEX - 62151876 62151891 3.0E-06 GGGGTTAAAAGGCCCC 16
FLI1_ETS_full_monomeric_14_1 SELEX - 62151250 62151263 6.0E-06 TACGGAAATCCCGT 14
V_NFKAPPAB65_01_M00052 TRANSFAC + 62151251 62151260 9.0E-06 CGGGATTTCC 10
V_AP2ALPHA_Q6_M01857 TRANSFAC - 62152313 62152323 2.0E-06 AGCCCCCGGCC 11
V_HSF1_Q6_M01023 TRANSFAC - 62151685 62151701 8.0E-06 CCTCCAGGGACTTCGCA 17
V_ZFX_01_M01593 TRANSFAC - 62151989 62152004 3.0E-06 GGCGAGGCCGCGCCCC 16
V_MTF1_Q4_M00650 TRANSFAC + 62152050 62152063 7.0E-06 TGTGCGCCCCGCCC 14
V_DEAF1_01_M01001 TRANSFAC - 62151079 62151103 1.0E-05 GTGTGCCCGTGTTGTTCCGGAGATC 25
V_SP1_Q6_01_M00931 TRANSFAC + 62152017 62152026 4.0E-06 GGGGCGGGGC 10
V_SP1_Q6_01_M00931 TRANSFAC + 62152301 62152310 4.0E-06 GGGGCGGGGC 10
V_PLAG1_02_M01973 TRANSFAC - 62152005 62152020 6.0E-06 CCCCTTTCCTGGCCCC 16
V_SP1_02_M01303 TRANSFAC + 62151844 62151854 8.0E-06 GGGGCGGGGGC 11
V_SP1_02_M01303 TRANSFAC + 62152287 62152297 3.0E-06 GGGGCGGGGGG 11
V_RPC155_01_M01798 TRANSFAC - 62151073 62151088 2.0E-06 TCCGGAGATCGAGGCC 16
V_CP2_02_M00947 TRANSFAC + 62152477 62152491 8.0E-06 GCTGGTTGGAGCCGC 15
V_ZNF219_01_M01122 TRANSFAC - 62152288 62152299 5.0E-06 CGCCCCCCGCCC 12
V_GC_01_M00255 TRANSFAC + 62152015 62152028 0.0E+00 AAGGGGCGGGGCCG 14
V_GC_01_M00255 TRANSFAC + 62152299 62152312 1.0E-06 GAGGGGCGGGGCTG 14
V_E2F1_01_M01250 TRANSFAC - 62151245 62151252 1.0E-05 CGTTTCTT 8
V_CREL_01_M00053 TRANSFAC + 62151251 62151260 6.0E-06 CGGGATTTCC 10
V_STAT1_01_M00224 TRANSFAC - 62153058 62153078 3.0E-06 GTGGACTTCCCGAAAAAGAAG 21
V_KROX_Q6_M00982 TRANSFAC - 62151844 62151857 2.0E-06 CCAGCCCCCGCCCC 14
V_ZBP89_Q4_M01816 TRANSFAC - 62151320 62151329 6.0E-06 TCCTCCCCCC 10
V_SP1_Q6_M00196 TRANSFAC - 62151535 62151547 8.0E-06 GGGAGGCGGGGCC 13
V_SP1_Q6_M00196 TRANSFAC + 62151842 62151854 9.0E-06 GAGGGGCGGGGGC 13
V_SP1_Q6_M00196 TRANSFAC + 62152015 62152027 1.0E-06 AAGGGGCGGGGCC 13
V_SP1_Q6_M00196 TRANSFAC - 62152054 62152066 9.0E-06 GGAGGGCGGGGCG 13
V_SP1_Q6_M00196 TRANSFAC + 62152299 62152311 2.0E-06 GAGGGGCGGGGCT 13
V_MAZ_Q6_01_M02023 TRANSFAC + 62151324 62151337 1.0E-06 GGAGGAGGAGAGGG 14
V_EGR1_04_M02848 TRANSFAC + 62149450 62149465 6.0E-06 TTACAAGTGGGACTGG 16
V_NFE4_Q5_M02105 TRANSFAC - 62151328 62151339 5.0E-06 CTCCCTCTCCTC 12
V_REX1_03_M01744 TRANSFAC + 62152659 62152670 9.0E-06 AGCATGGCGGCC 12
V_SP1SP3_Q4_M01219 TRANSFAC + 62151576 62151586 8.0E-06 CCGCCCCCTGC 11
V_CTCF_01_M01200 TRANSFAC - 62151574 62151593 4.0E-06 GCTGCCCGCAGGGGGCGGTG 20
V_TFIII_Q6_M00706 TRANSFAC + 62151332 62151340 6.0E-06 AGAGGGAGG 9
V_SP4_Q5_M01273 TRANSFAC - 62152016 62152026 8.0E-06 GCCCCGCCCCT 11
V_SP4_Q5_M01273 TRANSFAC - 62152300 62152310 8.0E-06 GCCCCGCCCCT 11
V_LBP9_01_M01592 TRANSFAC - 62152465 62152481 4.0E-06 CCAGCCCAAACCGGCCG 17
V_CNOT3_01_M01253 TRANSFAC - 62151990 62151999 8.0E-06 GGCCGCGCCC 10
V_E2F6_01_M01252 TRANSFAC - 62151245 62151252 1.0E-05 CGTTTCTT 8
V_ZFP206_01_M01742 TRANSFAC - 62152108 62152118 3.0E-06 TGCGCACGCGC 11
V_FPM315_01_M01587 TRANSFAC + 62151321 62151332 0.0E+00 GGGGGAGGAGGA 12
V_FPM315_01_M01587 TRANSFAC + 62151333 62151344 7.0E-06 GAGGGAGGACGC 12
V_NRF1_Q6_M00652 TRANSFAC + 62152109 62152118 6.0E-06 CGCGTGCGCA 10
V_REST_02_M02256 TRANSFAC + 62150929 62150949 1.0E-06 TGCAGGGCCCAGGACAGCGCC 21
V_SOX4_01_M01308 TRANSFAC - 62152448 62152455 1.0E-05 AACAAAGG 8
V_SP1_Q2_01_M00933 TRANSFAC - 62152300 62152309 7.0E-06 CCCCGCCCCT 10
V_SP1_Q4_01_M00932 TRANSFAC + 62152015 62152027 0.0E+00 AAGGGGCGGGGCC 13
V_SP1_Q4_01_M00932 TRANSFAC - 62152054 62152066 9.0E-06 GGAGGGCGGGGCG 13
V_SP1_Q4_01_M00932 TRANSFAC + 62152299 62152311 3.0E-06 GAGGGGCGGGGCT 13
Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns.
Developed at the Institute for Systems Biology in the Baliga Lab.
A Django site.   Powered by PostgreSQL