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CCDC28B Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 79140 coiled-coil domain containing 28B chr1 + 32661201 - 32666701 32666201 Transcription Factor Binding Sites   Download all TFBS in the CCDC28B promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints NKX2-8_homeodomain_full_monomeric_9_1 SELEX - 32667335 32667343 8.0E-06 ACACTTGAA 9 LBX2_homeodomain_DBD_dimeric_13_1 SELEX - 32666507 32666519 1.0E-06 CTTGACCCAATTA 13 EOMES_TBX_DBD_dimeric_20_1 SELEX + 32667243 32667262 8.0E-06 TAGCGCCAAGATAGTTGTGA 20 Sox17_MA0078.1 JASPAR + 32662334 32662342 2.0E-06 TTCATTGTC 9 NF-kappaB_MA0061.1 JASPAR + 32666850 32666859 3.0E-06 GGGACTTTCC 10 EN2_homeodomain_full_monomeric_10_1 SELEX - 32666505 32666514 7.0E-06 CCCAATTAGG 10 KLF16_C2H2_DBD_monomeric_11_1 SELEX + 32667207 32667217 1.0E-05 GCCCCGCCCCC 11 SOX21_HMG_DBD_dimeric_13_2 SELEX + 32670960 32670972 5.0E-06 TGAATGGAATTAA 13 MEF2D_MADS_DBD_dimeric_12_1 SELEX + 32665470 32665481 6.0E-06 GCTTTAAATAGC 12 SRY_HMG_DBD_dimeric_13_2 SELEX - 32670960 32670972 2.0E-06 TTAATTCCATTCA 13 EWSR1-FLI1_MA0149.1 JASPAR - 32671009 32671026 6.0E-06 GGAAAGGCGCAAGGAGGG 18 POU1F1_POU_DBD_monomeric_14_1 SELEX + 32666195 32666208 1.0E-06 TAAATGCAAATGAA 14 SOX7_HMG_full_dimeric_17_2 SELEX - 32670958 32670974 8.0E-06 GTTTAATTCCATTCAAC 17 MEF2A_MADS_DBD_dimeric_12_1 SELEX + 32665470 32665481 8.0E-06 GCTTTAAATAGC 12 POU2F2_POU_DBD_monomeric_11_1 SELEX + 32666196 32666206 8.0E-06 AAATGCAAATG 11 POU3F4_POU_DBD_monomeric_9_1 SELEX + 32666197 32666205 7.0E-06 AATGCAAAT 9 IRF7_IRF_DBD_trimeric_17_1 SELEX + 32666039 32666055 0.0E+00 AAAGGGAAAATCTTTTT 17 Sox1_HMG_DBD_dimeric_13_1 SELEX - 32670960 32670972 9.0E-06 TTAATTCCATTCA 13 MEF2B_MADS_full_dimeric_12_1 SELEX + 32665470 32665481 3.0E-06 GCTTTAAATAGC 12 Egr1_C2H2_mouse-DBD_mutant_DBD_monomeric_16_1 SELEX - 32666333 32666348 1.0E-05 TTCCGCCCCCGCCCTC 16 REL_MA0101.1 JASPAR + 32667031 32667040 6.0E-06 GGGGCTTTCC 10 Rfx3_RFX_DBD_dimeric_16_1 SELEX + 32671173 32671188 2.0E-06 GGTTGCCGTGGGAACG 16 Rfx3_RFX_DBD_dimeric_16_1 SELEX - 32671173 32671188 8.0E-06 CGTTCCCACGGCAACC 16 POU3F3_POU_DBD_monomeric_13_1 SELEX + 32666195 32666207 5.0E-06 TAAATGCAAATGA 13 Sox17_HMG_DBD_dimeric_15_2 SELEX - 32670959 32670973 7.0E-06 TTTAATTCCATTCAA 15 MEF2A_MA0052.1 JASPAR - 32665471 32665480 4.0E-06 CTATTTAAAG 10 SOX2_HMG_full_dimeric_15_1 SELEX - 32670959 32670973 1.0E-06 TTTAATTCCATTCAA 15 RELA_MA0107.1 JASPAR + 32666850 32666859 6.0E-06 GGGACTTTCC 10 FOXO4_forkhead_DBD_putatively-multimeric_12_1 SELEX + 32667017 32667028 3.0E-06 ATTACCCACACG 12 SP1_MA0079.2 JASPAR + 32667208 32667217 7.0E-06 CCCCGCCCCC 10 SOX14_HMG_DBD_dimeric_15_1 SELEX - 32670959 32670973 1.0E-06 TTTAATTCCATTCAA 15 YY2_C2H2_full_monomeric_11_1 SELEX + 32665993 32666003 5.0E-06 ACCACCATTTT 11 RARG_nuclearreceptor_DBD_dimeric_17_1 SELEX + 32666079 32666095 6.0E-06 AGGGTCCCCTAGGTTCA 17 RFX2_RFX_DBD_dimeric_16_1 SELEX + 32671173 32671188 5.0E-06 GGTTGCCGTGGGAACG 16 RFX2_RFX_DBD_dimeric_16_1 SELEX - 32671173 32671188 6.0E-06 CGTTCCCACGGCAACC 16 RFX5_RFX_DBD_dimeric_16_3 SELEX + 32671173 32671188 2.0E-06 GGTTGCCGTGGGAACG 16 RFX5_RFX_DBD_dimeric_16_3 SELEX - 32671173 32671188 2.0E-06 CGTTCCCACGGCAACC 16 POU3F1_POU_DBD_monomeric_12_1 SELEX + 32666196 32666207 2.0E-06 AAATGCAAATGA 12 PRDM1_C2H2_full_monomeric-or-dimeric_15_1 SELEX - 32666183 32666197 2.0E-06 TTAAAGAGAAAGTGA 15 Pou5f1_MA0142.1 JASPAR + 32666191 32666205 6.0E-06 TCTTTAAATGCAAAT 15 Myf_MA0055.1 JASPAR - 32663620 32663631 4.0E-06 CAGCAGCTGGAG 12 Myf_MA0055.1 JASPAR - 32665888 32665899 8.0E-06 CAACAGCAGCAG 12 Myf_MA0055.1 JASPAR - 32665891 32665902 3.0E-06 CAGCAACAGCAG 12 SOX18_HMG_full_dimeric_15_3 SELEX - 32670959 32670973 1.0E-06 TTTAATTCCATTCAA 15 Sox3_HMG_DBD_dimeric_17_3 SELEX - 32670958 32670974 5.0E-06 GTTTAATTCCATTCAAC 17 POU3F2_POU_DBD_monomeric_12_1 SELEX + 32666196 32666207 2.0E-06 AAATGCAAATGA 12 Sox1_HMG_DBD_dimeric_15_2 SELEX - 32670959 32670973 4.0E-06 TTTAATTCCATTCAA 15 RREB1_MA0073.1 JASPAR + 32666624 32666643 1.0E-05 ACCCACCCCCCCAACCCCCC 20 RREB1_MA0073.1 JASPAR + 32666627 32666646 2.0E-06 CACCCCCCCAACCCCCCCAG 20 RORA_2_MA0072.1 JASPAR + 32666505 32666518 4.0E-06 CCTAATTGGGTCAA 14 V_NFKAPPAB65_01_M00052 TRANSFAC + 32666850 32666859 7.0E-06 GGGACTTTCC 10 V_NFKB_C_M00208 TRANSFAC + 32666849 32666860 2.0E-06 AGGGACTTTCCG 12 V_AP1_Q2_M00173 TRANSFAC + 32662267 32662277 3.0E-06 AATGACTCAGA 11 V_NFKB_Q6_01_M00774 TRANSFAC - 32667030 32667045 5.0E-06 GCCTGGGAAAGCCCCA 16 V_HSF1_Q6_M01023 TRANSFAC + 32665865 32665881 3.0E-06 TTGCTCGAAGTGTCTTC 17 V_NKX29_01_M01352 TRANSFAC - 32665816 32665832 4.0E-06 TATTGAGCACTTTACAT 17 V_NKX29_01_M01352 TRANSFAC + 32665817 32665833 6.0E-06 TGTAAAGTGCTCAATAG 17 V_BCL6_01_M01183 TRANSFAC + 32662310 32662325 2.0E-06 CTTGCTGTTTTTCTTT 16 V_BCL6_01_M01183 TRANSFAC - 32666046 32666061 1.0E-06 TATTTTAAAAAGATTT 16 V_MMEF2_Q6_M00405 TRANSFAC + 32666050 32666065 2.0E-06 CTTTTTAAAATAGACA 16 V_POU5F1_02_M02245 TRANSFAC + 32666191 32666205 6.0E-06 TCTTTAAATGCAAAT 15 V_RELBP52_01_M01239 TRANSFAC + 32667031 32667040 4.0E-06 GGGGCTTTCC 10 V_RORA_Q4_M01138 TRANSFAC + 32666507 32666517 1.0E-06 TAATTGGGTCA 11 V_SP1_Q6_01_M00931 TRANSFAC - 32667207 32667216 4.0E-06 GGGGCGGGGC 10 V_OCT1_Q5_01_M00930 TRANSFAC - 32666197 32666207 1.0E-06 TCATTTGCATT 11 V_MEF2_02_M00231 TRANSFAC + 32665464 32665485 1.0E-06 GCCAGGGCTTTAAATAGCTGCC 22 V_MEF2_02_M00231 TRANSFAC + 32666046 32666067 9.0E-06 AAATCTTTTTAAAATAGACATC 22 V_IRF2_Q6_M01882 TRANSFAC - 32666183 32666198 2.0E-06 TTTAAAGAGAAAGTGA 16 V_POU2F3_01_M01476 TRANSFAC + 32666194 32666209 0.0E+00 TTAAATGCAAATGAAC 16 V_SP1_03_M02281 TRANSFAC + 32667208 32667217 7.0E-06 CCCCGCCCCC 10 V_AP2_Q6_M00189 TRANSFAC - 32671067 32671078 2.0E-06 ATCCCGCAGGCG 12 V_OCT_C_M00210 TRANSFAC + 32666125 32666137 4.0E-06 CTGCTTAGCATAC 13 V_OCT_C_M00210 TRANSFAC - 32666196 32666208 1.0E-06 TTCATTTGCATTT 13 V_AP4_Q6_02_M01860 TRANSFAC + 32663622 32663634 7.0E-06 CCAGCTGCTGCCC 13 V_AP4_Q6_02_M01860 TRANSFAC - 32666828 32666840 2.0E-06 TCAGCTGCAGCCA 13 V_COUPTF_Q6_M01036 TRANSFAC - 32667679 32667701 1.0E-06 CCTCTTGAACTTGGCCCGCTGCT 23 V_ZFP691_03_M02833 TRANSFAC + 32665817 32665833 3.0E-06 TGTAAAGTGCTCAATAG 17 V_MEF2A_Q6_M02024 TRANSFAC - 32665470 32665479 4.0E-06 TATTTAAAGC 10 V_MEF2A_Q6_M02024 TRANSFAC - 32666052 32666061 2.0E-06 TATTTTAAAA 10 V_STAT4_Q4_M01666 TRANSFAC - 32662315 32662328 0.0E+00 TTCAAAGAAAAACA 14 V_AP1_Q6_M00174 TRANSFAC + 32662267 32662277 6.0E-06 AATGACTCAGA 11 V_WT1_Q6_01_M02036 TRANSFAC - 32666336 32666345 4.0E-06 CGCCCCCGCC 10 V_TAL1_Q6_M00993 TRANSFAC + 32663621 32663630 3.0E-06 TCCAGCTGCT 10 V_ZNF219_01_M01122 TRANSFAC + 32667211 32667222 6.0E-06 CGCCCCCCAGCC 12 V_GC_01_M00255 TRANSFAC - 32665966 32665979 9.0E-06 AGGGGGTGGGGCGG 14 V_GC_01_M00255 TRANSFAC - 32667205 32667218 2.0E-06 GGGGGGCGGGGCTG 14 V_TCF3_04_M02816 TRANSFAC - 32662317 32662333 6.0E-06 CTAGCTTCAAAGAAAAA 17 V_MYF_01_M01302 TRANSFAC - 32663620 32663631 4.0E-06 CAGCAGCTGGAG 12 V_MYF_01_M01302 TRANSFAC - 32665888 32665899 8.0E-06 CAACAGCAGCAG 12 V_MYF_01_M01302 TRANSFAC - 32665891 32665902 3.0E-06 CAGCAACAGCAG 12 V_SPI1_03_M02078 TRANSFAC + 32666118 32666127 1.0E-05 AGAGGAACTG 10 V_HNF4_01_B_M00411 TRANSFAC + 32671191 32671205 9.0E-06 TGGGGCAAAGCCCAC 11 V_CREL_01_M00053 TRANSFAC + 32667031 32667040 6.0E-06 GGGGCTTTCC 10 V_DOBOX4_01_M01359 TRANSFAC + 32666434 32666450 5.0E-06 GAAATAGATCCCCGGTC 17 V_KROX_Q6_M00982 TRANSFAC - 32666334 32666347 8.0E-06 TCCGCCCCCGCCCT 14 V_AMEF2_Q6_M00403 TRANSFAC + 32666050 32666067 3.0E-06 CTTTTTAAAATAGACATC 18 V_AP1_Q6_01_M00925 TRANSFAC + 32662268 32662276 7.0E-06 ATGACTCAG 9 V_AP1_Q4_M00188 TRANSFAC + 32662267 32662277 7.0E-06 AATGACTCAGA 11 V_SP1_Q6_M00196 TRANSFAC - 32667206 32667218 0.0E+00 GGGGGGCGGGGCT 13 V_IRF3_Q3_M01279 TRANSFAC - 32666039 32666051 3.0E-06 AGATTTTCCCTTT 13 V_AP2BETA_Q3_M01858 TRANSFAC + 32671110 32671125 2.0E-06 GTCGGGGGCTGGGGGG 16 V_OCT1_05_M00161 TRANSFAC + 32666125 32666138 5.0E-06 CTGCTTAGCATACG 14 V_EGR1_Q6_M01873 TRANSFAC + 32666337 32666346 4.0E-06 GCGGGGGCGG 10 V_IRF_Q6_M00772 TRANSFAC + 32666182 32666196 5.0E-06 GTCACTTTCTCTTTA 15 V_MEF2_03_M00232 TRANSFAC + 32665464 32665485 3.0E-06 GCCAGGGCTTTAAATAGCTGCC 22 V_MEF2_03_M00232 TRANSFAC + 32666046 32666067 3.0E-06 AAATCTTTTTAAAATAGACATC 22 V_SREBP_Q6_M01168 TRANSFAC + 32666154 32666168 6.0E-06 CATCTCACCCCACCG 15 V_SZF11_01_M01109 TRANSFAC + 32662219 32662233 0.0E+00 CCAGGGTATTAGCCA 15 V_PAX6_Q2_M00979 TRANSFAC - 32666302 32666315 4.0E-06 CTGACCTGGAGGTT 14 V_GR_01_M00955 TRANSFAC + 32662183 32662209 4.0E-06 ATTCTATATGCTGAATGTTCTGCTGTT 27 V_MEF2_04_M00233 TRANSFAC + 32665464 32665485 9.0E-06 GCCAGGGCTTTAAATAGCTGCC 22 V_SPIB_01_M01204 TRANSFAC - 32667652 32667668 9.0E-06 CAGATGAGGAAGTCCTA 17 V_DAX1_01_M01248 TRANSFAC + 32666172 32666191 3.0E-06 TAAGGAGAAGGTCACTTTCT 20 V_TCF7_03_M02817 TRANSFAC - 32662317 32662333 3.0E-06 CTAGCTTCAAAGAAAAA 17 V_RREB1_01_M00257 TRANSFAC + 32666632 32666645 1.0E-06 CCCCAACCCCCCCA 14 V_AP1_C_M00199 TRANSFAC + 32662268 32662276 6.0E-06 ATGACTCAG 9 V_MEF2_Q6_01_M00941 TRANSFAC - 32665471 32665482 4.0E-06 AGCTATTTAAAG 12 V_MEF2_Q6_01_M00941 TRANSFAC - 32666053 32666064 3.0E-06 GTCTATTTTAAA 12 V_STAT4_Q5_M02117 TRANSFAC - 32662319 32662328 3.0E-06 TTCAAAGAAA 10 V_AP1_01_M00517 TRANSFAC + 32662266 32662278 5.0E-06 GAATGACTCAGAC 13 V_STAT3_03_M01595 TRANSFAC + 32666030 32666045 1.0E-06 ACTGCCGGGAAAGGGA 16 V_IK3_01_M00088 TRANSFAC - 32666236 32666248 4.0E-06 TCCCGGGAACACC 13 V_AP1_Q4_01_M00926 TRANSFAC - 32662268 32662275 1.0E-05 TGAGTCAT 8 V_OCT1_B_M00342 TRANSFAC + 32666197 32666206 5.0E-06 AATGCAAATG 10 V_OCT_Q6_M00795 TRANSFAC - 32666197 32666207 1.0E-06 TCATTTGCATT 11 V_NKX23_01_M01457 TRANSFAC + 32665817 32665832 3.0E-06 TGTAAAGTGCTCAATA 16 V_ICSBP_Q6_M00699 TRANSFAC - 32666184 32666195 2.0E-06 AAAGAGAAAGTG 12 V_ELK1_01_M00007 TRANSFAC + 32667226 32667241 7.0E-06 GTGACAGGAAGCCCCA 16 V_SP4_Q5_M01273 TRANSFAC + 32667207 32667217 1.0E-06 GCCCCGCCCCC 11 V_ELF1_Q6_M00746 TRANSFAC - 32667656 32667667 5.0E-06 AGATGAGGAAGT 12 V_S8_01_M00099 TRANSFAC - 32666503 32666518 3.0E-06 TTGACCCAATTAGGGA 16 V_MINI19_B_M00323 TRANSFAC + 32667668 32667688 9.0E-06 GCCATCCCCCAAGCAGCGGGC 21 V_TAL1_01_M01591 TRANSFAC + 32667657 32667669 2.0E-06 CTTCCTCATCTGC 13 V_OCT2_01_M01368 TRANSFAC + 32666194 32666209 0.0E+00 TTAAATGCAAATGAAC 16 V_AP1FJ_Q2_M00172 TRANSFAC + 32662267 32662277 9.0E-06 AATGACTCAGA 11 V_OCT1_Q6_M00195 TRANSFAC + 32666194 32666208 8.0E-06 TTAAATGCAAATGAA 15 V_NKX3A_02_M01383 TRANSFAC - 32665816 32665832 8.0E-06 TATTGAGCACTTTACAT 17 V_NKX3A_02_M01383 TRANSFAC + 32665817 32665833 7.0E-06 TGTAAAGTGCTCAATAG 17 V_PARP_Q3_M01211 TRANSFAC + 32666431 32666440 4.0E-06 TGGGAAATAG 10 V_ZBTB4_04_M02929 TRANSFAC - 32662225 32662240 2.0E-06 CAAACACTGGCTAATA 16 V_FRA1_Q5_M01267 TRANSFAC - 32662268 32662275 1.0E-05 TGAGTCAT 8 V_MTATA_B_M00320 TRANSFAC - 32665464 32665480 4.0E-06 CTATTTAAAGCCCTGGC 17 V_MTATA_B_M00320 TRANSFAC + 32665469 32665485 8.0E-06 GGCTTTAAATAGCTGCC 17 V_ZFP281_01_M01597 TRANSFAC - 32665969 32665979 5.0E-06 AGGGGGTGGGG 11 V_MEF3_B_M00319 TRANSFAC + 32665540 32665552 0.0E+00 TGCTCAGGTTTCC 13 V_EGR1_06_M02744 TRANSFAC - 32666334 32666347 5.0E-06 TCCGCCCCCGCCCT 14 V_IRF1_Q6_01_M01881 TRANSFAC + 32666184 32666197 3.0E-06 CACTTTCTCTTTAA 14 V_NFKAPPAB_01_M00054 TRANSFAC + 32666850 32666859 3.0E-06 GGGACTTTCC 10 V_SREBP1_02_M00221 TRANSFAC + 32666156 32666166 7.0E-06 TCTCACCCCAC 11 V_SRF_06_M02916 TRANSFAC - 32662313 32662329 7.0E-06 CTTCAAAGAAAAACAGC 17 V_EWSR1FLI1_01_M02252 TRANSFAC - 32671009 32671026 6.0E-06 GGAAAGGCGCAAGGAGGG 18 V_YY1_01_M00059 TRANSFAC + 32665992 32666008 2.0E-06 CACCACCATTTTGTAAG 17 V_PR_02_M00957 TRANSFAC + 32665420 32665446 3.0E-06 TGTTGTATCAGATGCTGTTCTGGGGAC 27 V_DR3_Q4_M00966 TRANSFAC + 32665587 32665607 2.0E-06 GGTCTACCTTATGACCTGGTG 21 V_SOX15_04_M02903 TRANSFAC + 32670959 32670973 0.0E+00 TTGAATGGAATTAAA 15 V_SP1_Q2_01_M00933 TRANSFAC + 32667208 32667217 4.0E-06 CCCCGCCCCC 10 V_MEF2A_05_M01301 TRANSFAC - 32665471 32665482 2.0E-06 AGCTATTTAAAG 12 V_UF1H3BETA_Q6_M01068 TRANSFAC - 32665957 32665970 6.0E-06 GGCGGGGGAGAGGA 14 V_SP1_Q4_01_M00932 TRANSFAC - 32665967 32665979 6.0E-06 AGGGGGTGGGGCG 13 V_SP1_Q4_01_M00932 TRANSFAC - 32667206 32667218 1.0E-06 GGGGGGCGGGGCT 13 V_BRCA_01_M01082 TRANSFAC - 32662261 32662268 1.0E-05 TTCTGTTG 8 V_RORA2_01_M00157 TRANSFAC + 32666506 32666518 4.0E-06 CTAATTGGGTCAA 13 V_NANOG_02_M01247 TRANSFAC + 32661773 32661792 8.0E-06 GTGGTAAAAGAAAGGAAAGG 20 V_NANOG_02_M01247 TRANSFAC + 32670968 32670987 7.0E-06 ATTAAACCAGAAAGAAAGCA 20 V_OCT4_01_M01125 TRANSFAC + 32666191 32666205 6.0E-06 TCTTTAAATGCAAAT 15 V_ER_Q6_M00191 TRANSFAC - 32666178 32666196 9.0E-06 TAAAGAGAAAGTGACCTTC 19

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.