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APOO Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 79135 apolipoprotein O chrX - 23925557 - 23931057 23926057 Transcription Factor Binding Sites   Download all TFBS in the APOO promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints CTCF_MA0139.1 JASPAR + 23925763 23925781 8.0E-06 CGGCCGGGAGGGGGCGGTG 19 SP8_C2H2_DBD_monomeric_12_1 SELEX + 23925862 23925873 0.0E+00 GCCACGCCCACT 12 SP3_C2H2_DBD_monomeric_11_1 SELEX + 23925862 23925872 1.0E-06 GCCACGCCCAC 11 MYF6_bHLH_full_dimeric_10_1 SELEX + 23922419 23922428 6.0E-06 GACAACTGTT 10 MYF6_bHLH_full_dimeric_10_1 SELEX - 23922419 23922428 7.0E-06 AACAGTTGTC 10 HSFY2_HSF_DBD_dimer-of-dimers_15_1 SELEX + 23926280 23926294 3.0E-06 TTCGAAAGCTTCGCA 15 PKNOX1_MEIS_DBD_dimeric_12_1 SELEX + 23925780 23925791 1.0E-06 TGACAGCTGTGA 12 PKNOX1_MEIS_DBD_dimeric_12_1 SELEX - 23925780 23925791 1.0E-06 TCACAGCTGTCA 12 KLF16_C2H2_DBD_monomeric_11_1 SELEX + 23925862 23925872 3.0E-06 GCCACGCCCAC 11 Zfp423_MA0116.1 JASPAR + 23922364 23922378 2.0E-06 GCCACCCTGGGTTGA 15 KLF14_C2H2_DBD_monomeric_14_1 SELEX + 23925861 23925874 0.0E+00 GGCCACGCCCACTA 14 ZNF75A_C2H2_DBD_monomeric_12_1 SELEX - 23925691 23925702 8.0E-06 GCTTTTCCCGCC 12 NFYA_MA0060.1 JASPAR + 23922390 23922405 2.0E-06 CTAAGCCAATCAGATC 16 SOX8_HMG_DBD_dimeric_14_1 SELEX + 23922275 23922288 8.0E-06 TGCATATCCAGTCT 14 Pknox2_MEIS_DBD_dimeric_12_1 SELEX + 23925780 23925791 2.0E-06 TGACAGCTGTGA 12 Pknox2_MEIS_DBD_dimeric_12_1 SELEX - 23925780 23925791 4.0E-06 TCACAGCTGTCA 12 TGIF2_MEIS_DBD_dimeric_12_1 SELEX + 23925780 23925791 2.0E-06 TGACAGCTGTGA 12 TGIF2_MEIS_DBD_dimeric_12_1 SELEX - 23925780 23925791 4.0E-06 TCACAGCTGTCA 12 TGIF2_MEIS_DBD_dimeric_12_1 SELEX - 23926993 23927004 8.0E-06 TGAAATATGTCA 12 KLF13_C2H2_full_monomeric_18_1 SELEX + 23925860 23925877 3.0E-06 CGGCCACGCCCACTATAG 18 ZNF238_C2H2_full_monomeric_13_1 SELEX + 23927171 23927183 6.0E-06 CTCCCAGATGTTA 13 Klf4_MA0039.2 JASPAR - 23925862 23925871 1.0E-05 TGGGCGTGGC 10 OTX2_homeodomain_DBD_dimeric_15_1 SELEX + 23926823 23926837 3.0E-06 CCTAATCCTATAAAA 15 Meis3_MEIS_DBD_dimeric_12_1 SELEX + 23925780 23925791 0.0E+00 TGACAGCTGTGA 12 Meis3_MEIS_DBD_dimeric_12_1 SELEX - 23925780 23925791 1.0E-06 TCACAGCTGTCA 12 RFX2_RFX_DBD_dimeric_15_1 SELEX + 23926090 23926104 2.0E-06 GGTTGCTAGGCGGCA 15 TCF4_bHLH_full_dimeric_10_1 SELEX + 23926927 23926936 3.0E-06 CACACCTGTA 10 HOXD13_homeodomain_DBD_monomeric_10_1 SELEX + 23926829 23926838 9.0E-06 CCTATAAAAA 10 FOXG1_forkhead_DBD_putatively-multimeric_12_1 SELEX - 23922320 23922331 6.0E-06 ATGAACACAATG 12 RFX3_RFX_DBD_dimeric_15_1 SELEX + 23926090 23926104 8.0E-06 GGTTGCTAGGCGGCA 15 Otx1_homeodomain_DBD_dimeric_15_1 SELEX + 23926823 23926837 4.0E-06 CCTAATCCTATAAAA 15 SP4_C2H2_full_monomeric_17_1 SELEX + 23925859 23925875 1.0E-06 TCGGCCACGCCCACTAT 17 CTCF_C2H2_full_monomeric_17_1 SELEX - 23926245 23926261 4.0E-06 AGCGCCCCCTCTCGGCA 17 SP1_C2H2_DBD_monomeric_11_1 SELEX + 23925862 23925872 4.0E-06 GCCACGCCCAC 11 HOXA13_homeodomain_full_monomeric_10_1 SELEX + 23926829 23926838 4.0E-06 CCTATAAAAA 10 ZNF143_C2H2_DBD_monomeric_16_1 SELEX + 23925487 23925502 7.0E-06 TACCCACGATCCCAAG 16 Klf12_C2H2_DBD_monomeric_15_1 SELEX + 23925861 23925875 0.0E+00 GGCCACGCCCACTAT 15 TGIF2LX_MEIS_full_dimeric_12_1 SELEX - 23922418 23922429 7.0E-06 TAACAGTTGTCA 12 TGIF2LX_MEIS_full_dimeric_12_1 SELEX + 23925780 23925791 2.0E-06 TGACAGCTGTGA 12 TGIF2LX_MEIS_full_dimeric_12_1 SELEX - 23925780 23925791 2.0E-06 TCACAGCTGTCA 12 DUXA_homeodomain_DBD_dimeric_13_1 SELEX + 23922390 23922402 9.0E-06 CTAAGCCAATCAG 13 Meis2_MEIS_DBD_dimeric_12_1 SELEX + 23925780 23925791 0.0E+00 TGACAGCTGTGA 12 Meis2_MEIS_DBD_dimeric_12_1 SELEX - 23925780 23925791 3.0E-06 TCACAGCTGTCA 12 HOXC13_homeodomain_DBD_monomeric_10_1 SELEX + 23926829 23926838 3.0E-06 CCTATAAAAA 10 MEIS2_MEIS_DBD_dimeric_14_1 SELEX + 23925779 23925792 3.0E-06 GTGACAGCTGTGAC 14 MEIS2_MEIS_DBD_dimeric_14_1 SELEX - 23925779 23925792 3.0E-06 GTCACAGCTGTCAC 14 TGIF1_MEIS_DBD_dimeric_12_1 SELEX + 23925780 23925791 1.0E-06 TGACAGCTGTGA 12 TGIF1_MEIS_DBD_dimeric_12_1 SELEX - 23925780 23925791 2.0E-06 TCACAGCTGTCA 12 TGIF1_MEIS_DBD_dimeric_12_1 SELEX + 23926993 23927004 9.0E-06 TGACATATTTCA 12 HOXB13_homeodomain_DBD_monomeric_10_1 SELEX + 23926829 23926838 4.0E-06 CCTATAAAAA 10 V_DBX1_01_M01483 TRANSFAC + 23926368 23926384 5.0E-06 TTTTAAATTTAAACTAA 17 V_ATF5_01_M01295 TRANSFAC + 23922297 23922307 4.0E-06 CCTCTTCCTTC 11 V_SOX14_05_M02902 TRANSFAC - 23922316 23922330 2.0E-06 TGAACACAATGGAGT 15 V_ZEC_01_M01081 TRANSFAC + 23922265 23922277 0.0E+00 CATTGTTGGTTGC 13 V_HP1SITEFACTOR_Q6_M00725 TRANSFAC - 23926864 23926875 8.0E-06 AAATTTTTCCAG 12 V_MMEF2_Q6_M00405 TRANSFAC + 23926366 23926381 5.0E-06 GGTTTTAAATTTAAAC 16 V_IRF_Q6_01_M00972 TRANSFAC - 23927192 23927202 3.0E-06 GAAAGAGAAAA 11 V_IRF2_Q6_M01882 TRANSFAC - 23927189 23927204 6.0E-06 AAGAAAGAGAAAAGCA 16 V_RP58_01_M00532 TRANSFAC - 23927173 23927184 4.0E-06 TTAACATCTGGG 12 V_RFX4_03_M02789 TRANSFAC - 23926088 23926102 8.0E-06 CCGCCTAGCAACCGC 15 V_HOXD13_01_M01404 TRANSFAC + 23926826 23926841 7.0E-06 AATCCTATAAAAAGTG 16 V_NFY_Q6_01_M00775 TRANSFAC + 23922389 23922401 4.0E-06 TCTAAGCCAATCA 13 V_GC_01_M00255 TRANSFAC - 23926069 23926082 8.0E-06 CAGGGGCGGAGCCT 14 V_HOXB13_01_M01467 TRANSFAC + 23926826 23926841 1.0E-06 AATCCTATAAAAAGTG 16 V_SOX8_04_M02912 TRANSFAC - 23922324 23922337 7.0E-06 GCATTCATGAACAC 14 V_SP4_03_M02810 TRANSFAC - 23925767 23925783 4.0E-06 GTCACCGCCCCCTCCCG 17 V_ZBP89_Q4_M01816 TRANSFAC + 23925396 23925405 4.0E-06 CCCTCCCCCA 10 V_HNF1_Q6_01_M01011 TRANSFAC + 23926365 23926385 4.0E-06 AGGTTTTAAATTTAAACTAAT 21 V_TATA_C_M00216 TRANSFAC + 23926829 23926838 2.0E-06 CCTATAAAAA 10 V_RFXDC2_03_M02790 TRANSFAC - 23926088 23926102 2.0E-06 CCGCCTAGCAACCGC 15 V_SP1SP3_Q4_M01219 TRANSFAC - 23925769 23925779 1.0E-06 CCGCCCCCTCC 11 V_GR_Q6_M00192 TRANSFAC + 23922314 23922332 6.0E-06 GAACTCCATTGTGTTCATG 19 V_KLF7_03_M02773 TRANSFAC + 23925859 23925874 3.0E-06 TCGGCCACGCCCACTA 16 V_SMAD4_Q6_M00733 TRANSFAC + 23922430 23922444 9.0E-06 CAGGGTCAGACAACT 15 V_STAF_02_M00264 TRANSFAC + 23925485 23925505 5.0E-06 CCTACCCACGATCCCAAGAGG 21 V_CTCF_01_M01200 TRANSFAC + 23925762 23925781 2.0E-06 GCGGCCGGGAGGGGGCGGTG 20 V_NKX32_02_M01482 TRANSFAC - 23927199 23927215 7.0E-06 ACAATCCTCTTAAGAAA 17 V_IRF7_01_M00453 TRANSFAC - 23926868 23926885 6.0E-06 TACAAATTCTAAATTTTT 18 V_LRH1_Q5_M01142 TRANSFAC + 23925806 23925817 6.0E-06 CTCACCTTGAAC 12 V_CAAT_01_M00254 TRANSFAC + 23922390 23922401 4.0E-06 CTAAGCCAATCA 12 V_MYOD_Q6_02_M02100 TRANSFAC - 23925780 23925788 4.0E-06 CAGCTGTCA 9 V_ALPHACP1_01_M00687 TRANSFAC + 23922392 23922402 3.0E-06 AAGCCAATCAG 11 V_AP3_Q6_M00690 TRANSFAC - 23926871 23926878 5.0E-06 TCTAAATT 8 V_NFYC_Q5_M02107 TRANSFAC + 23922392 23922405 1.0E-06 AAGCCAATCAGATC 14 V_PLAG1_01_M01778 TRANSFAC + 23926240 23926255 5.0E-06 GAGGCTGCCGAGAGGG 16 V_HDX_01_M01333 TRANSFAC - 23925903 23925919 5.0E-06 TTGGAGAAATCAAGGCC 17 V_NFY_01_M00287 TRANSFAC + 23922390 23922405 1.0E-06 CTAAGCCAATCAGATC 16 V_RSRFC4_01_M00026 TRANSFAC - 23926367 23926382 1.0E-05 AGTTTAAATTTAAAAC 16 V_E47_01_M00002 TRANSFAC - 23926924 23926938 4.0E-06 ACTACAGGTGTGCCC 15 V_PLZF_02_M01075 TRANSFAC - 23926356 23926384 6.0E-06 TTAGTTTAAATTTAAAACCTGAGAAACCT 29 V_PLZF_02_M01075 TRANSFAC + 23926359 23926387 1.0E-06 TTTCTCAGGTTTTAAATTTAAACTAATAT 29 V_ZFP281_01_M01597 TRANSFAC + 23929768 23929778 5.0E-06 TGGGGGATGGG 11 V_MEF3_B_M00319 TRANSFAC - 23925422 23925434 0.0E+00 GGGTCAGGTTTCA 13 V_IRF1_Q6_01_M01881 TRANSFAC - 23922519 23922532 8.0E-06 CACTTTCTCATTCT 14 V_MYF6_03_M02781 TRANSFAC - 23922417 23922432 8.0E-06 CTGTAACAGTTGTCAG 16 V_ZFP281_04_M02831 TRANSFAC + 23925393 23925407 2.0E-06 TGACCCTCCCCCATC 15 V_ZFP281_04_M02831 TRANSFAC - 23929766 23929780 7.0E-06 TCCCCATCCCCCACT 15 V_SOX18_04_M02905 TRANSFAC + 23926367 23926382 2.0E-06 GTTTTAAATTTAAACT 16 V_SOX18_04_M02905 TRANSFAC - 23926367 23926382 2.0E-06 AGTTTAAATTTAAAAC 16 V_SATB1_01_M01232 TRANSFAC - 23926375 23926386 5.0E-06 TATTAGTTTAAA 12 V_PAX4_02_M00377 TRANSFAC + 23926867 23926877 9.0E-06 GAAAAATTTAG 11 V_PIT1_Q6_M00802 TRANSFAC - 23922323 23922340 3.0E-06 AATGCATTCATGAACACA 18 V_MEF2_01_M00006 TRANSFAC + 23925384 23925399 9.0E-06 CTCCTAAAATGACCCT 16 V_ARP1_01_M00155 TRANSFAC + 23925414 23925429 6.0E-06 TCAGGTTCTGAAACCT 16 V_MAFK_04_M02880 TRANSFAC + 23926832 23926846 9.0E-06 ATAAAAAGTGTAAGC 15 V_NFYA_Q5_M02106 TRANSFAC + 23922392 23922405 2.0E-06 AAGCCAATCAGATC 14 V_HOXD10_01_M01375 TRANSFAC + 23926826 23926842 1.0E-05 AATCCTATAAAAAGTGT 17 V_NANOG_02_M01247 TRANSFAC - 23927186 23927205 2.0E-06 TAAGAAAGAGAAAAGCAGCC 20 V_TCF11_01_M00285 TRANSFAC - 23925384 23925396 1.0E-06 GTCATTTTAGGAG 13

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.