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ERI3 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 79033 ERI1 exoribonuclease family member 3 chr1 - 44820439 - 44825939 44820939 Transcription Factor Binding Sites   Download all TFBS in the ERI3 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints POU4F2_POU_full_monomeric_16_1 SELEX + 44819432 44819447 3.0E-06 AGGAATTGTTAATGAG 16 SP8_C2H2_DBD_monomeric_12_1 SELEX + 44820700 44820711 9.0E-06 GCAACGCCCCCT 12 MSX2_homeodomain_DBD_dimeric_18_1 SELEX - 44819441 44819458 0.0E+00 CAAATTAAAAGCTCATTA 18 IRF7_IRF_DBD_dimeric_14_1 SELEX + 44821204 44821217 5.0E-06 TTTAAAATGAAACT 14 BARX1_homeodomain_DBD_dimeric_17_1 SELEX - 44819441 44819457 0.0E+00 AAATTAAAAGCTCATTA 17 RFX4_RFX_DBD_dimeric_16_1 SELEX + 44820690 44820705 0.0E+00 TGTCGCCATGGCAACG 16 RFX4_RFX_DBD_dimeric_16_1 SELEX - 44820690 44820705 0.0E+00 CGTTGCCATGGCGACA 16 FOXL1_forkhead_full_dimeric_13_1 SELEX - 44819407 44819419 1.0E-06 TGTAAATAATCAG 13 POU5F1P1_POU_DBD_monomeric_9_1 SELEX - 44825816 44825824 2.0E-06 TATGCAAAT 9 POU2F3_POU_DBD_monomeric_9_1 SELEX - 44825816 44825824 2.0E-06 TATGCAAAT 9 POU1F1_POU_DBD_monomeric_14_1 SELEX - 44825813 44825826 1.0E-06 CTTATGCAAATTGG 14 Tcfap2a_TFAP_DBD_dimeric_13_1 SELEX - 44825847 44825859 3.0E-06 AGCCCCTGGGGCA 13 POU2F2_POU_DBD_monomeric_11_1 SELEX - 44825815 44825825 0.0E+00 TTATGCAAATT 11 POU3F4_POU_DBD_monomeric_9_1 SELEX - 44825816 44825824 2.0E-06 TATGCAAAT 9 Pou2f2_POU_DBD_monomeric_9_1 SELEX - 44825816 44825824 2.0E-06 TATGCAAAT 9 TFAP2C_TFAP_full_dimeric_13_1 SELEX + 44825847 44825859 8.0E-06 TGCCCCAGGGGCT 13 POU4F3_POU_DBD_monomeric_16_1 SELEX + 44819432 44819447 4.0E-06 AGGAATTGTTAATGAG 16 Rfx3_RFX_DBD_dimeric_16_1 SELEX + 44820690 44820705 0.0E+00 TGTCGCCATGGCAACG 16 Rfx3_RFX_DBD_dimeric_16_1 SELEX - 44820690 44820705 0.0E+00 CGTTGCCATGGCGACA 16 POU3F3_POU_DBD_monomeric_13_1 SELEX - 44825814 44825826 2.0E-06 CTTATGCAAATTG 13 POU6F2_POU_DBD_dimeric_16_1 SELEX + 44819440 44819455 2.0E-06 TTAATGAGCTTTTAAT 16 POU6F2_POU_DBD_dimeric_16_1 SELEX - 44819440 44819455 2.0E-06 ATTAAAAGCTCATTAA 16 Foxc1_forkhead_DBD_dimeric_11_1 SELEX - 44819408 44819418 3.0E-06 GTAAATAATCA 11 POU2F3_POU_DBD_dimeric_12_1 SELEX + 44817702 44817713 6.0E-06 ATGAATTTGTAA 12 FOXC2_forkhead_DBD_dimeric_11_1 SELEX - 44819408 44819418 2.0E-06 GTAAATAATCA 11 TFAP2A_TFAP_DBD_dimeric_13_1 SELEX - 44825847 44825859 1.0E-06 AGCCCCTGGGGCA 13 RFX2_RFX_DBD_dimeric_16_1 SELEX + 44820690 44820705 0.0E+00 TGTCGCCATGGCAACG 16 RFX2_RFX_DBD_dimeric_16_1 SELEX - 44820690 44820705 0.0E+00 CGTTGCCATGGCGACA 16 Msx3_homeodomain_DBD_dimeric_18_1 SELEX - 44819441 44819458 1.0E-06 CAAATTAAAAGCTCATTA 18 RFX5_RFX_DBD_dimeric_16_3 SELEX + 44820690 44820705 0.0E+00 TGTCGCCATGGCAACG 16 RFX5_RFX_DBD_dimeric_16_3 SELEX - 44820690 44820705 0.0E+00 CGTTGCCATGGCGACA 16 POU3F1_POU_DBD_monomeric_12_1 SELEX - 44825814 44825825 0.0E+00 TTATGCAAATTG 12 LHX9_homeodomain_DBD_dimeric_13_1 SELEX - 44819441 44819453 4.0E-06 TAAAAGCTCATTA 13 TFAP2B_TFAP_DBD_dimeric_13_1 SELEX - 44825847 44825859 3.0E-06 AGCCCCTGGGGCA 13 POU5F1P1_POU_DBD_monomeric_12_1 SELEX + 44817702 44817713 8.0E-06 ATGAATTTGTAA 12 Pou5f1_MA0142.1 JASPAR + 44819345 44819359 8.0E-06 CTTTTATTTGGAAAT 15 POU2F1_POU_DBD_monomeric_12_1 SELEX - 44825815 44825826 0.0E+00 CTTATGCAAATT 12 FOXO3_forkhead_full_dimeric_14_1 SELEX - 44821088 44821101 8.0E-06 GTCACCATCTTGAC 14 FOXB1_forkhead_full_monomeric_9_1 SELEX - 44819411 44819419 4.0E-06 TGTAAATAA 9 REST_MA0138.2 JASPAR + 44820453 44820473 3.0E-06 GTAAGCACATGGGCCAGCACC 21 POU3F2_POU_DBD_monomeric_12_1 SELEX - 44825814 44825825 0.0E+00 TTATGCAAATTG 12 MSX1_homeodomain_DBD_dimeric_18_1 SELEX - 44819441 44819458 1.0E-06 CAAATTAAAAGCTCATTA 18 FOXC1_forkhead_DBD_dimeric_13_1 SELEX - 44819408 44819420 7.0E-06 CTGTAAATAATCA 13 RREB1_MA0073.1 JASPAR + 44820913 44820932 3.0E-06 CCACAACACACCGACTCACC 20 V_DMRT4_01_M01149 TRANSFAC - 44821207 44821219 6.0E-06 AAAGTTTCATTTT 13 V_NFAT_Q4_01_M00935 TRANSFAC + 44819352 44819361 7.0E-06 TTGGAAATTT 10 V_BTEB3_Q5_M01865 TRANSFAC - 44817637 44817649 2.0E-06 GTAAGGGAAGTGT 13 V_ALX4_01_M00619 TRANSFAC - 44819409 44819421 4.0E-06 CCTGTAAATAATC 13 V_FOXA2_04_M02749 TRANSFAC - 44819407 44819423 8.0E-06 ATCCTGTAAATAATCAG 17 V_CEBP_Q3_M00770 TRANSFAC + 44819348 44819359 8.0E-06 TTATTTGGAAAT 12 V_ZFX_01_M01593 TRANSFAC - 44820800 44820815 6.0E-06 GCGCGGGCCGCGCCCG 16 V_HMGIY_Q3_M01010 TRANSFAC + 44821193 44821207 0.0E+00 AAAGGAATTTTTTTA 15 V_HMGIY_Q3_M01010 TRANSFAC + 44821194 44821208 2.0E-06 AAGGAATTTTTTTAA 15 V_EVI1_04_M00081 TRANSFAC - 44817663 44817677 4.0E-06 AGTTATGATATGATC 15 V_NKX29_01_M01352 TRANSFAC - 44819454 44819470 2.0E-06 ACTTAAGCACTCCAAAT 17 V_NKX29_01_M01352 TRANSFAC + 44819455 44819471 0.0E+00 TTTGGAGTGCTTAAGTT 17 V_POU5F1_02_M02245 TRANSFAC + 44819345 44819359 8.0E-06 CTTTTATTTGGAAAT 15 V_SPDEF_04_M02915 TRANSFAC - 44825886 44825901 3.0E-06 ATTCAGATCCTAGAAG 16 V_RORA_Q4_M01138 TRANSFAC - 44819395 44819405 4.0E-06 TAGCTAGGTCA 11 V_OCT1_Q5_01_M00930 TRANSFAC + 44825814 44825824 6.0E-06 CAATTTGCATA 11 V_HNF4ALPHA_Q6_M00638 TRANSFAC + 44819443 44819455 6.0E-06 ATGAGCTTTTAAT 13 V_OCT1_01_M00135 TRANSFAC - 44825811 44825829 1.0E-06 GTCCTTATGCAAATTGGGG 19 V_HOXA4_01_M01370 TRANSFAC + 44819435 44819451 4.0E-06 AATTGTTAATGAGCTTT 17 V_CEBP_01_M00159 TRANSFAC + 44819349 44819361 0.0E+00 TATTTGGAAATTT 13 V_POU2F3_01_M01476 TRANSFAC - 44825812 44825827 2.0E-06 CCTTATGCAAATTGGG 16 V_SOX11_04_M02899 TRANSFAC + 44819433 44819446 9.0E-06 GGAATTGTTAATGA 14 V_HOXD1_01_M01448 TRANSFAC + 44819436 44819452 8.0E-06 ATTGTTAATGAGCTTTT 17 V_CEBP_Q2_M00190 TRANSFAC + 44825815 44825828 6.0E-06 AATTTGCATAAGGA 14 V_PITX2_Q6_M02114 TRANSFAC + 44820340 44820349 3.0E-06 AGTAATCCCA 10 V_NKX24_01_M01350 TRANSFAC - 44819453 44819468 5.0E-06 TTAAGCACTCCAAATT 16 V_NFY_Q6_01_M00775 TRANSFAC + 44821008 44821020 9.0E-06 CTTTGACCAATGG 13 V_MYBL1_04_M02884 TRANSFAC - 44820782 44820796 7.0E-06 CCGCCAACTGCCCTG 15 V_CDX_Q5_M00991 TRANSFAC + 44819499 44819516 6.0E-06 CACCACAGAATCTATAAA 18 V_ELF4_04_M02850 TRANSFAC - 44819342 44819358 2.0E-06 TTTCCAAATAAAAGTGC 17 V_ELF4_04_M02850 TRANSFAC - 44821194 44821210 2.0E-06 TTTTAAAAAAATTCCTT 17 V_FREAC3_01_M00291 TRANSFAC - 44819408 44819423 0.0E+00 ATCCTGTAAATAATCA 16 V_CEBPE_Q6_M01868 TRANSFAC - 44819350 44819363 2.0E-06 TGAAATTTCCAAAT 14 V_SOX8_04_M02912 TRANSFAC - 44817696 44817709 1.0E-05 AAATTCATGGGAGA 14 V_SP4_03_M02810 TRANSFAC + 44820699 44820715 1.0E-06 GGCAACGCCCCCTCCTC 17 V_IK1_01_M00086 TRANSFAC - 44817619 44817631 1.0E-06 CTTTGGGAATACT 13 V_IRF_Q6_M00772 TRANSFAC - 44821206 44821220 7.0E-06 GAAAGTTTCATTTTA 15 V_NKX22_02_M01372 TRANSFAC - 44819452 44819468 2.0E-06 TTAAGCACTCCAAATTA 17 V_CMYB_01_M00004 TRANSFAC + 44820779 44820796 9.0E-06 GCTCAGGGCAGTTGGCGG 18 V_IK2_01_M00087 TRANSFAC - 44817620 44817631 0.0E+00 CTTTGGGAATAC 12 V_SP1SP3_Q4_M01219 TRANSFAC + 44820703 44820713 7.0E-06 ACGCCCCCTCC 11 V_ISGF3G_03_M02771 TRANSFAC + 44821205 44821219 4.0E-06 TTAAAATGAAACTTT 15 V_TBP_06_M02814 TRANSFAC - 44821198 44821213 1.0E-06 TCATTTTAAAAAAATT 16 V_OCT1_B_M00342 TRANSFAC - 44825815 44825824 1.0E-06 TATGCAAATT 10 V_OCT_Q6_M00795 TRANSFAC + 44825814 44825824 3.0E-06 CAATTTGCATA 11 V_NKX23_01_M01457 TRANSFAC + 44819455 44819470 7.0E-06 TTTGGAGTGCTTAAGT 16 V_NKX23_01_M01457 TRANSFAC - 44819455 44819470 9.0E-06 ACTTAAGCACTCCAAA 16 V_ICSBP_Q6_M00699 TRANSFAC + 44821207 44821218 9.0E-06 AAAATGAAACTT 12 V_FXR_IR1_Q6_M00767 TRANSFAC - 44817601 44817613 5.0E-06 AGGTCTCTAACCC 13 V_MTF1_06_M02882 TRANSFAC - 44821200 44821213 1.0E-05 TCATTTTAAAAAAA 14 V_POU6F1_02_M01462 TRANSFAC + 44819436 44819452 0.0E+00 ATTGTTAATGAGCTTTT 17 V_POU5F1_01_M01307 TRANSFAC - 44825815 44825824 6.0E-06 TATGCAAATT 10 V_IPF1_05_M01255 TRANSFAC - 44819437 44819448 9.0E-06 GCTCATTAACAA 12 V_OCT2_01_M01368 TRANSFAC - 44825812 44825827 1.0E-06 CCTTATGCAAATTGGG 16 V_CNOT3_01_M01253 TRANSFAC - 44820801 44820810 8.0E-06 GGCCGCGCCC 10 V_FOXL1_02_M02857 TRANSFAC - 44819344 44819359 4.0E-06 ATTTCCAAATAAAAGT 16 V_NKX3A_02_M01383 TRANSFAC + 44819455 44819471 4.0E-06 TTTGGAGTGCTTAAGTT 17 V_PLAG1_01_M01778 TRANSFAC - 44825837 44825852 1.0E-06 GGGGCACTAGAGAGTG 16 V_PITX2_Q2_M00482 TRANSFAC + 44820340 44820350 2.0E-06 AGTAATCCCAG 11 V_REST_02_M02256 TRANSFAC + 44820453 44820473 3.0E-06 GTAAGCACATGGGCCAGCACC 21 V_SMAD_Q6_01_M00974 TRANSFAC - 44821739 44821749 2.0E-06 TATGCAGACAG 11 V_OCT1_07_M00248 TRANSFAC - 44825815 44825826 2.0E-06 CTTATGCAAATT 12 V_IRF1_Q6_01_M01881 TRANSFAC - 44821205 44821218 5.0E-06 AAGTTTCATTTTAA 14 V_DMRT2_01_M01147 TRANSFAC + 44821206 44821221 2.0E-06 TAAAATGAAACTTTCT 16 V_SRF_06_M02916 TRANSFAC - 44821194 44821210 6.0E-06 TTTTAAAAAAATTCCTT 17 V_POU6F1_03_M01479 TRANSFAC + 44819436 44819452 0.0E+00 ATTGTTAATGAGCTTTT 17 V_HOXB3_01_M01330 TRANSFAC - 44819435 44819451 7.0E-06 AAAGCTCATTAACAATT 17 V_PIT1_Q6_M00802 TRANSFAC + 44821742 44821759 8.0E-06 TCTGCATACTTACACTTA 18 V_BRN3C_01_M01408 TRANSFAC + 44819435 44819450 9.0E-06 AATTGTTAATGAGCTT 16 V_SOX5_07_M02909 TRANSFAC + 44819430 44819446 1.0E-06 GCAGGAATTGTTAATGA 17 V_RFX1_02_M00281 TRANSFAC + 44820689 44820706 1.0E-06 CTGTCGCCATGGCAACGC 18 V_PAX2_02_M00486 TRANSFAC + 44820366 44820374 2.0E-06 AATAAACTC 9 V_HOXC9_01_M01416 TRANSFAC - 44819436 44819451 6.0E-06 AAAGCTCATTAACAAT 16

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.