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ALMS1 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 7840 Alstrom syndrome 1 chr2 + 73607885 - 73613385 73612885 Transcription Factor Binding Sites   Download all TFBS in the ALMS1 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints PITX3_homeodomain_DBD_monomeric_9_1 SELEX + 73612494 73612502 5.0E-06 CTTAATCCC 9 NHLH1_MA0048.1 JASPAR - 73613428 73613439 7.0E-06 CCTCAGCTGCGC 12 SOX9_HMG_full_dimeric_17_3 SELEX + 73609611 73609627 5.0E-06 TAGGAATTTCATTCACA 17 TBX20_TBX_DBD_dimeric_19_1 SELEX + 73612602 73612620 3.0E-06 ATGTGTGATTATAACGGGT 19 EWSR1-FLI1_MA0149.1 JASPAR - 73612944 73612961 6.0E-06 GGAGGGGGGGAGGGAGGG 18 SOX7_HMG_full_dimeric_17_2 SELEX + 73609611 73609627 1.0E-06 TAGGAATTTCATTCACA 17 GCM1_GCM_full_dimeric_16_1 SELEX - 73613173 73613188 9.0E-06 ATGCTGGGGCCCGTAG 16 RARA_nuclearreceptor_DBD_dimeric_18_2 SELEX - 73613539 73613556 6.0E-06 GAGTTCAAAAGGCCCAGG 18 PITX1_homeodomain_full_monomeric_8_1 SELEX + 73612495 73612502 1.0E-05 TTAATCCC 8 TBX1_TBX_DBD_dimeric_19_1 SELEX + 73612602 73612620 8.0E-06 ATGTGTGATTATAACGGGT 19 LEF1_HMG_DBD_monomeric_15_1 SELEX - 73612627 73612641 7.0E-06 AGAGATCAAACTCTA 15 SP1_MA0079.2 JASPAR + 73612955 73612964 9.0E-06 CCCCTCCTCC 10 RHOXF1_homeodomain_full_monomeric_8_1 SELEX + 73612495 73612502 1.0E-05 TTAATCCC 8 GSC_homeodomain_full_monomeric_10_1 SELEX + 73612494 73612503 4.0E-06 CTTAATCCCT 10 GSC2_homeodomain_DBD_monomeric_10_1 SELEX + 73612494 73612503 7.0E-06 CTTAATCCCT 10 Sox3_HMG_DBD_dimeric_17_3 SELEX + 73609611 73609627 2.0E-06 TAGGAATTTCATTCACA 17 Sox3_HMG_DBD_dimeric_17_3 SELEX - 73609611 73609627 9.0E-06 TGTGAATGAAATTCCTA 17 RARG_nuclearreceptor_full_dimeric_16_1 SELEX - 73613541 73613556 9.0E-06 GAGTTCAAAAGGCCCA 16 V_FOXP1_01_M00987 TRANSFAC + 73612594 73612613 1.0E-06 TAATTTGCATGTGTGATTAT 20 V_KLF15_Q2_M01714 TRANSFAC + 73613333 73613346 8.0E-06 GGGGAGGGGTGTGG 14 V_AP1_Q2_M00173 TRANSFAC - 73609642 73609652 5.0E-06 ACTGACTCATT 11 V_OBOX5_05_M03066 TRANSFAC - 73612490 73612506 8.0E-06 TAGAGGGATTAAGAACT 17 V_SRY_07_M02813 TRANSFAC - 73612586 73612601 7.0E-06 GCAAATTATAAAGTTT 16 V_OBOX1_01_M01450 TRANSFAC - 73612491 73612507 0.0E+00 TTAGAGGGATTAAGAAC 17 V_ZFP740_03_M02834 TRANSFAC - 73613356 73613371 2.0E-06 CCTCCACCCCCAACTC 16 V_OCT1_01_M00135 TRANSFAC - 73612591 73612609 4.0E-06 TCACACATGCAAATTATAA 19 V_POU2F3_01_M01476 TRANSFAC - 73612592 73612607 2.0E-06 ACACATGCAAATTATA 16 V_RFX4_03_M02789 TRANSFAC + 73612848 73612862 5.0E-06 GTCCCTAGCAACGCG 15 V_SP1_03_M02281 TRANSFAC + 73612955 73612964 9.0E-06 CCCCTCCTCC 10 V_BRN2_01_M00145 TRANSFAC + 73609633 73609648 3.0E-06 CACATGAAAAATGAGT 16 V_AP1_Q6_M00174 TRANSFAC - 73609642 73609652 3.0E-06 ACTGACTCATT 11 V_ZFP128_03_M02828 TRANSFAC - 73612614 73612630 5.0E-06 TCTAGGACGTACCCGTT 17 V_GC_01_M00255 TRANSFAC + 73613139 73613152 5.0E-06 AAGAGGCGGGGCGG 14 V_CRX_Q4_M00623 TRANSFAC + 73612492 73612504 8.0E-06 TTCTTAATCCCTC 13 V_OBOX5_02_M01480 TRANSFAC - 73612490 73612506 8.0E-06 TAGAGGGATTAAGAACT 17 V_AP1_Q4_M00188 TRANSFAC - 73609642 73609652 1.0E-05 ACTGACTCATT 11 V_MAZ_Q6_01_M02023 TRANSFAC - 73612943 73612956 1.0E-06 GGGGGAGGGAGGGG 14 V_MAZ_Q6_01_M02023 TRANSFAC - 73612948 73612961 4.0E-06 GGAGGGGGGGAGGG 14 V_MAZ_Q6_01_M02023 TRANSFAC - 73612951 73612964 2.0E-06 GGAGGAGGGGGGGA 14 V_MAZ_Q6_01_M02023 TRANSFAC - 73612954 73612967 3.0E-06 GGAGGAGGAGGGGG 14 V_HNF1_Q6_01_M01011 TRANSFAC - 73612585 73612605 4.0E-06 ACATGCAAATTATAAAGTTTT 21 V_OBOX2_01_M01364 TRANSFAC - 73612491 73612507 0.0E+00 TTAGAGGGATTAAGAAC 17 V_RFXDC2_03_M02790 TRANSFAC + 73612848 73612862 7.0E-06 GTCCCTAGCAACGCG 15 V_OCT1_04_M00138 TRANSFAC - 73612589 73612611 1.0E-06 AATCACACATGCAAATTATAAAG 23 V_HBP1_03_M02762 TRANSFAC - 73609614 73609629 8.0E-06 TCTGTGAATGAAATTC 16 V_SP1SP3_Q4_M01219 TRANSFAC + 73612954 73612964 1.0E-05 CCCCCTCCTCC 11 V_AP1_C_M00199 TRANSFAC + 73609643 73609651 3.0E-06 ATGAGTCAG 9 V_AP1_01_M00517 TRANSFAC + 73609641 73609653 9.0E-06 AAATGAGTCAGTT 13 V_AP1_Q2_01_M00924 TRANSFAC - 73609639 73609650 2.0E-06 TGACTCATTTTT 12 V_ZFP691_04_M02937 TRANSFAC - 73609638 73609654 9.0E-06 TAACTGACTCATTTTTC 17 V_OBOX2_02_M03064 TRANSFAC - 73612491 73612507 0.0E+00 TTAGAGGGATTAAGAAC 17 V_OCT2_01_M01368 TRANSFAC - 73612592 73612607 2.0E-06 ACACATGCAAATTATA 16 V_OCT1_Q6_M00195 TRANSFAC - 73612593 73612607 1.0E-06 ACACATGCAAATTAT 15 V_LUN1_01_M00480 TRANSFAC - 73609671 73609687 9.0E-06 TCACAGACTACTTGGGA 17 V_T3R_Q6_M00963 TRANSFAC + 73612683 73612691 3.0E-06 ACTGTCCTT 9 V_PITX1_01_M01484 TRANSFAC - 73612491 73612507 0.0E+00 TTAGAGGGATTAAGAAC 17 V_DOBOX5_01_M01463 TRANSFAC - 73612490 73612506 4.0E-06 TAGAGGGATTAAGAACT 17 V_FPM315_01_M01587 TRANSFAC - 73612956 73612967 4.0E-06 GGAGGAGGAGGG 12 V_FPM315_01_M01587 TRANSFAC - 73612959 73612970 3.0E-06 GGAGGAGGAGGA 12 V_FPM315_01_M01587 TRANSFAC + 73613032 73613043 3.0E-06 GGAGGAGGAGGA 12 V_FPM315_01_M01587 TRANSFAC + 73613035 73613046 3.0E-06 GGAGGAGGAGGA 12 V_FPM315_01_M01587 TRANSFAC + 73613038 73613049 3.0E-06 GGAGGAGGAGGA 12 V_FPM315_01_M01587 TRANSFAC + 73613041 73613052 3.0E-06 GGAGGAGGAGGA 12 V_FPM315_01_M01587 TRANSFAC + 73613044 73613055 3.0E-06 GGAGGAGGAGGA 12 V_FPM315_01_M01587 TRANSFAC + 73613047 73613058 3.0E-06 GGAGGAGGAGGA 12 V_FPM315_01_M01587 TRANSFAC + 73613050 73613061 3.0E-06 GGAGGAGGAGGA 12 V_FPM315_01_M01587 TRANSFAC + 73613053 73613064 3.0E-06 GGAGGAGGAGGA 12 V_FPM315_01_M01587 TRANSFAC + 73613056 73613067 3.0E-06 GGAGGAGGAGGA 12 V_FPM315_01_M01587 TRANSFAC + 73613059 73613070 3.0E-06 GGAGGAGGAGGA 12 V_OTX2_01_M01387 TRANSFAC - 73612490 73612506 4.0E-06 TAGAGGGATTAAGAACT 17 V_ZFP281_04_M02831 TRANSFAC + 73612946 73612960 4.0E-06 CTCCCTCCCCCCCTC 15 V_EWSR1FLI1_01_M02252 TRANSFAC - 73612944 73612961 6.0E-06 GGAGGGGGGGAGGGAGGG 18 V_NFE2_Q6_M02104 TRANSFAC + 73609642 73609657 2.0E-06 AATGAGTCAGTTATCC 16 V_GSC_01_M01428 TRANSFAC + 73612490 73612506 3.0E-06 AGTTCTTAATCCCTCTA 17 V_NFE2_01_M00037 TRANSFAC - 73609643 73609653 6.0E-06 AACTGACTCAT 11 V_PITX2_01_M01447 TRANSFAC - 73612490 73612506 4.0E-06 TAGAGGGATTAAGAACT 17 V_AP2ALPHA_02_M01045 TRANSFAC - 73612813 73612827 6.0E-06 AACGCCTTAGGGCGG 15 V_OBOX5_01_M01381 TRANSFAC - 73612490 73612506 7.0E-06 TAGAGGGATTAAGAACT 17 V_OBOX3_02_M03065 TRANSFAC - 73612491 73612507 0.0E+00 TTAGAGGGATTAAGAAC 17 V_OTX1_01_M01366 TRANSFAC - 73612490 73612506 7.0E-06 TAGAGGGATTAAGAACT 17 V_OBOX6_06_M03067 TRANSFAC + 73612490 73612506 7.0E-06 AGTTCTTAATCCCTCTA 17 V_OBOX3_01_M01466 TRANSFAC - 73612491 73612507 0.0E+00 TTAGAGGGATTAAGAAC 17 V_SOX14_03_M02798 TRANSFAC - 73612586 73612601 9.0E-06 GCAAATTATAAAGTTT 16

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