Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

SLC30A4 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 7782 solute carrier family 30 (zinc transporter), member 4 chr15 - 45814502 - 45820002 45815002 Transcription Factor Binding Sites   Download all TFBS in the SLC30A4 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints LBX2_homeodomain_DBD_dimeric_13_1 SELEX - 45813989 45814001 1.0E-06 CTCAATCTAAGTA 13 MYBL2_MYB_DBD_dimeric_16_1 SELEX - 45813907 45813922 3.0E-06 AAAGTTAAGGACGTTA 16 HOXA10_homeodomain_DBD_monomeric_12_1 SELEX - 45813808 45813819 7.0E-06 GATCGTAAATAA 12 IRF7_IRF_DBD_dimeric_14_1 SELEX + 45814670 45814683 4.0E-06 TGGAAAACGAAACA 14 SPIC_ETS_full_monomeric_14_1 SELEX + 45813874 45813887 0.0E+00 AAAAAGAGGAAGTT 14 FOXG1_forkhead_DBD_dimeric_17_1 SELEX - 45813809 45813825 5.0E-06 GTAAATGATCGTAAATA 17 IRX2_homeodomain_DBD_dimeric_12_1 SELEX + 45813886 45813897 0.0E+00 TTACATGACATA 12 IRF8_IRF_full_dimeric_14_1 SELEX + 45814670 45814683 8.0E-06 TGGAAAACGAAACA 14 HOXD11_homeodomain_DBD_monomeric_10_1 SELEX - 45813809 45813818 6.0E-06 ATCGTAAATA 10 HOXC11_homeodomain_full_monomeric_11_1 SELEX - 45813809 45813819 6.0E-06 GATCGTAAATA 11 IRF7_IRF_DBD_trimeric_17_1 SELEX + 45814673 45814689 7.0E-06 AAAACGAAACACGTTAT 17 BARHL2_homeodomain_full_dimeric_16_1 SELEX - 45813809 45813824 1.0E-06 TAAATGATCGTAAATA 16 IRF1_MA0050.1 JASPAR + 45813956 45813967 9.0E-06 GAAAGTCAAAGT 12 IRF1_MA0050.1 JASPAR + 45814672 45814683 3.0E-06 GAAAACGAAACA 12 Barhl1_homeodomain_DBD_dimeric_16_1 SELEX - 45813809 45813824 0.0E+00 TAAATGATCGTAAATA 16 SP1_MA0079.2 JASPAR + 45814837 45814846 7.0E-06 CCCCGCCCCC 10 HOXC11_homeodomain_DBD_monomeric_11_1 SELEX - 45813809 45813819 8.0E-06 GATCGTAAATA 11 PRDM1_C2H2_full_monomeric-or-dimeric_15_1 SELEX + 45813955 45813969 4.0E-06 AGAAAGTCAAAGTTA 15 HOXD12_homeodomain_DBD_monomeric_11_1 SELEX - 45813809 45813819 5.0E-06 GATCGTAAATA 11 SPI1_ETS_full_monomeric_14_1 SELEX + 45813874 45813887 0.0E+00 AAAAAGAGGAAGTT 14 IRF3_IRF_full_trimeric_21_1 SELEX + 45814122 45814142 1.0E-06 AGGAAAGGTAAACGGAAAGTG 21 HOXC12_homeodomain_DBD_monomeric_11_1 SELEX - 45813809 45813819 8.0E-06 GATCGTAAATA 11 E2F1_E2F_DBD_dimeric_12_1 SELEX + 45814695 45814706 6.0E-06 AAAGGCGCCCAA 12 E2F2_E2F_DBD_dimeric_18_1 SELEX + 45814692 45814709 8.0E-06 ATTAAAGGCGCCCAACCC 18 Irx3_homeodomain_DBD_dimeric_12_1 SELEX + 45813886 45813897 0.0E+00 TTACATGACATA 12 IRF2_MA0051.1 JASPAR + 45814671 45814688 5.0E-06 GGAAAACGAAACACGTTA 18 IRX5_homeodomain_DBD_dimeric_12_1 SELEX + 45813886 45813897 0.0E+00 TTACATGACATA 12 V_AP2ALPHA_Q6_M01857 TRANSFAC + 45814840 45814850 6.0E-06 CGCCCCCGGCC 11 V_AP2ALPHA_Q6_M01857 TRANSFAC - 45815255 45815265 9.0E-06 AGCCCCCGGCG 11 V_SPI1_01_M01203 TRANSFAC + 45813874 45813890 0.0E+00 AAAAAGAGGAAGTTACA 17 V_MAFB_05_M02775 TRANSFAC - 45815468 45815484 5.0E-06 AGAACTGCTGACGACGA 17 V_SPIB_02_M02041 TRANSFAC + 45813878 45813887 8.0E-06 AGAGGAAGTT 10 V_MEF2_02_M00231 TRANSFAC - 45813820 45813841 4.0E-06 CGCAACGTTTAAAATAGTAAAT 22 V_IRF_Q6_01_M00972 TRANSFAC + 45813950 45813960 1.0E-05 AGAAGAGAAAG 11 V_SP1_03_M02281 TRANSFAC + 45814837 45814846 7.0E-06 CCCCGCCCCC 10 V_TR4_Q2_M01725 TRANSFAC + 45813862 45813872 6.0E-06 CCAGACCTTTG 11 V_LHX3_01_M01471 TRANSFAC - 45814684 45814700 1.0E-05 GCCTTTAATTTATAACG 17 V_SP1_02_M01303 TRANSFAC - 45814835 45814845 3.0E-06 GGGGCGGGGAG 11 V_PU1_Q4_M01172 TRANSFAC - 45813875 45813893 0.0E+00 TCATGTAACTTCCTCTTTT 19 V_NKX62_Q2_M00489 TRANSFAC - 45814793 45814804 7.0E-06 GTATTAAATAGA 12 V_WT1_Q6_01_M02036 TRANSFAC - 45815098 45815107 4.0E-06 CGCCCCCGCC 10 V_SPI1_03_M02078 TRANSFAC + 45813878 45813887 2.0E-06 AGAGGAAGTT 10 V_LMX1_01_M01409 TRANSFAC - 45814684 45814700 8.0E-06 GCCTTTAATTTATAACG 17 V_MRF2_01_M00454 TRANSFAC - 45813980 45813993 0.0E+00 AAGTACAATATAAA 14 V_KROX_Q6_M00982 TRANSFAC - 45815096 45815109 4.0E-06 CGCGCCCCCGCCCA 14 V_HOXD12_01_M01380 TRANSFAC - 45813806 45813822 6.0E-06 AATGATCGTAAATAACT 17 V_RXRA_04_M02895 TRANSFAC - 45814052 45814067 2.0E-06 TCAGGAAGTTTGTATT 16 V_IRF_Q6_M00772 TRANSFAC - 45813950 45813964 1.0E-06 TTGACTTTCTCTTCT 15 V_MEF2_03_M00232 TRANSFAC - 45813820 45813841 1.0E-05 CGCAACGTTTAAAATAGTAAAT 22 V_HOXD11_01_M01434 TRANSFAC - 45813806 45813822 5.0E-06 AATGATCGTAAATAACT 17 V_ELF5_01_M01197 TRANSFAC + 45813877 45813887 1.0E-05 AAGAGGAAGTT 11 V_ELF5_01_M01197 TRANSFAC - 45814058 45814068 1.0E-05 TTCAGGAAGTT 11 V_SPIB_01_M01204 TRANSFAC + 45813874 45813890 0.0E+00 AAAAAGAGGAAGTTACA 17 V_RFX_Q6_M00975 TRANSFAC + 45819524 45819532 4.0E-06 CTGTTGCCA 9 V_HNF4A_Q6_01_M02016 TRANSFAC + 45814301 45814315 4.0E-06 GGTCAAAGGTAAGTC 15 V_HB24_01_M01399 TRANSFAC + 45814683 45814697 9.0E-06 ACGTTATAAATTAAA 15 V_TBP_06_M02814 TRANSFAC - 45814683 45814698 5.0E-06 CTTTAATTTATAACGT 16 V_ELK1_01_M00007 TRANSFAC + 45813875 45813890 1.0E-06 AAAAGAGGAAGTTACA 16 V_SP4_Q5_M01273 TRANSFAC + 45814836 45814846 9.0E-06 TCCCCGCCCCC 11 V_ELF1_Q6_M00746 TRANSFAC + 45813875 45813886 0.0E+00 AAAAGAGGAAGT 12 V_TBP_01_M00471 TRANSFAC + 45814687 45814694 8.0E-06 TATAAATT 8 V_EHF_06_M02745 TRANSFAC + 45813874 45813888 7.0E-06 AAAAAGAGGAAGTTA 15 V_OSR2_04_M02889 TRANSFAC + 45815368 45815383 7.0E-06 TCTTGCTAACTGAAAA 16 V_MYCMAX_B_M00322 TRANSFAC + 45815008 45815017 3.0E-06 GCCACGCGCG 10 V_SPIC_02_M02077 TRANSFAC + 45813878 45813887 1.0E-06 AGAGGAAGTT 10 V_BBX_03_M02739 TRANSFAC + 45813893 45813907 6.0E-06 ACATACAATGAAGAT 15 V_SOX8_03_M02808 TRANSFAC + 45813979 45813995 1.0E-05 GTTTATATTGTACTTAG 17 V_RFX3_04_M02788 TRANSFAC - 45819519 45819541 6.0E-06 CTCCAGCCTTGGCAACAGAACGA 23 V_SP1_Q2_01_M00933 TRANSFAC + 45814837 45814846 4.0E-06 CCCCGCCCCC 10 V_TFE_Q6_M01029 TRANSFAC - 45814028 45814035 1.0E-05 TCATGTGA 8 V_BRCA_01_M01082 TRANSFAC + 45819522 45819529 1.0E-05 TTCTGTTG 8 V_PAX4_04_M00380 TRANSFAC + 45813841 45813870 1.0E-06 GAAAATTAACCTGGTATTTTACCAGACCTT 30 V_SPI1_02_M02043 TRANSFAC + 45813878 45813887 6.0E-06 AGAGGAAGTT 10 V_SPIB_03_M02076 TRANSFAC + 45813878 45813887 2.0E-06 AGAGGAAGTT 10

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.