Search TFs
or Genes
Construction
and Validation
Optimal
Promoter Size
Download Citation and
Contact

CA5A


EntrezDescriptionChrom.StrandPromoter
(Start - Stop)
TSS
763 carbonic anhydrase VA, mitochondrial chr16 -87969612 - 87975112 87970112

Transcription Factor Binding Sites

 
Download all TFBS in the CA5A promoter
 
MotifSourceStrandStartStop PValueMatch
Sequence
Overlap w/
Footprints
Zfp652_C2H2_DBD_monomeric_13_1 SELEX + 87970189 87970201 1.0E-05 CCTAATGGTTAAA 13
IRF8_IRF_full_dimeric_14_1 SELEX - 87965144 87965157 9.0E-06 TAGAAACTGAGACT 14
TGIF2_MEIS_DBD_dimeric_12_1 SELEX + 87968823 87968834 1.0E-05 TGGCAGCTGCCA 12
TGIF2_MEIS_DBD_dimeric_12_1 SELEX - 87968823 87968834 1.0E-05 TGGCAGCTGCCA 12
NR2F1_MA0017.1 JASPAR - 87970193 87970206 0.0E+00 TGAACTTTAACCAT 14
ESR1_MA0112.2 JASPAR - 87970596 87970615 7.0E-06 AAGCAAGGACTCCATGACTT 20
NR2C2_nuclearreceptor_DBD_dimeric_14_1 SELEX + 87970193 87970206 8.0E-06 ATGGTTAAAGTTCA 14
IRF9_IRF_full_trimeric_15_1 SELEX - 87965144 87965158 4.0E-06 ATAGAAACTGAGACT 15
SPDEF_ETS_full_putative-multimer_16_1 SELEX + 87965163 87965178 8.0E-06 GCAGGAAGGAGAATAA 16
ETS1_ETS_full_dimeric_18_1 SELEX + 87965267 87965284 9.0E-06 GGAGGATGCATTTCCCTG 18
MEIS2_MEIS_DBD_dimeric_14_1 SELEX + 87968822 87968835 7.0E-06 TTGGCAGCTGCCAA 14
MEIS2_MEIS_DBD_dimeric_14_1 SELEX - 87968822 87968835 7.0E-06 TTGGCAGCTGCCAA 14
HNF4A_nuclearreceptor_full_dimeric_14_1 SELEX + 87970193 87970206 9.0E-06 ATGGTTAAAGTTCA 14
IRF3_IRF_full_trimeric_21_1 SELEX - 87965143 87965163 7.0E-06 CAGATATAGAAACTGAGACTG 21
RXRA_nuclearreceptor_full_dimeric_14_1 SELEX + 87970193 87970206 7.0E-06 ATGGTTAAAGTTCA 14
HNF1A_MA0046.1 JASPAR + 87970195 87970208 7.0E-06 GGTTAAAGTTCAAC 14
V_ESR1_01_M02261 TRANSFAC - 87970596 87970615 7.0E-06 AAGCAAGGACTCCATGACTT 20
V_STAT_Q6_M00777 TRANSFAC - 87965717 87965729 2.0E-06 TTTTTTTCTTAGA 13
V_MEF2_02_M00231 TRANSFAC + 87970611 87970632 7.0E-06 TGCTTGCCTTAAAATAGGTGCG 22
V_AREB6_04_M00415 TRANSFAC + 87970404 87970412 8.0E-06 CTGTTTCTT 9
V_PPAR_DR1_Q2_M00763 TRANSFAC - 87970194 87970206 3.0E-06 TGAACTTTAACCA 13
V_HEN1_01_M00068 TRANSFAC - 87968854 87968875 0.0E+00 CTGGGTCTCAGGTGCTTCCTCC 22
V_TCFAP2E_04_M02926 TRANSFAC + 87965717 87965730 6.0E-06 TCTAAGAAAAAAAA 14
V_TCFAP2E_04_M02926 TRANSFAC + 87965718 87965731 6.0E-06 CTAAGAAAAAAAAA 14
V_LDSPOLYA_B_M00317 TRANSFAC + 87965468 87965483 2.0E-06 TGTCTGTGTGTCCTTT 16
V_AR_03_M00956 TRANSFAC + 87965391 87965417 9.0E-06 CCTGCAGATGCGTTCTGTTCTCTCTCA 27
V_TAL1_GATA1_01_M02243 TRANSFAC + 87965198 87965215 3.0E-06 CTTTGCTGAGAAGATAAG 18
V_WT1_Q6_01_M02036 TRANSFAC - 87970374 87970383 4.0E-06 CGCCCCCGCC 10
V_CP2_02_M00947 TRANSFAC - 87965300 87965314 9.0E-06 GCAGGGTTGTGCTGG 15
V_PR_Q2_M00960 TRANSFAC - 87965405 87965414 7.0E-06 GAGAGAACAG 10
V_CEBPE_Q6_M01868 TRANSFAC - 87969889 87969902 6.0E-06 TCAAATTTCCTAAG 14
V_COUP_01_M00158 TRANSFAC - 87970193 87970206 0.0E+00 TGAACTTTAACCAT 14
V_KROX_Q6_M00982 TRANSFAC - 87970372 87970385 2.0E-06 CTCGCCCCCGCCTC 14
V_AP1_Q4_M00188 TRANSFAC + 87965349 87965359 4.0E-06 AGTGACTAAGC 11
V_HNF1_Q6_01_M01011 TRANSFAC - 87970192 87970212 7.0E-06 ATGGGTTGAACTTTAACCATT 21
V_ASCL2_03_M02737 TRANSFAC - 87968820 87968836 3.0E-06 TTTGGCAGCTGCCAAGT 17
V_ASCL2_03_M02737 TRANSFAC + 87968821 87968837 2.0E-06 CTTGGCAGCTGCCAAAG 17
V_AHR_01_M00139 TRANSFAC - 87965681 87965698 3.0E-06 GCTCAGGCTGGCGTGCAA 18
Tal1_Gata1_MA0140.1 JASPAR + 87965198 87965215 3.0E-06 CTTTGCTGAGAAGATAAG 18
V_MEF2_04_M00233 TRANSFAC + 87970611 87970632 9.0E-06 TGCTTGCCTTAAAATAGGTGCG 22
V_ERALPHA_01_M01801 TRANSFAC + 87965654 87965668 2.0E-06 AGGTTGCAGTGAGCT 15
V_RREB1_01_M00257 TRANSFAC - 87970426 87970439 1.0E-06 CCCCAAACCACACG 14
V_HNF4A_Q6_01_M02016 TRANSFAC + 87970195 87970209 9.0E-06 GGTTAAAGTTCAACC 15
V_HNF4_DR1_Q3_M00764 TRANSFAC - 87970194 87970206 4.0E-06 TGAACTTTAACCA 13
V_ISGF3G_03_M02771 TRANSFAC - 87965148 87965162 6.0E-06 AGATATAGAAACTGA 15
V_BLIMP1_Q6_M01066 TRANSFAC - 87965273 87965288 6.0E-06 GGGGCAGGGAAATGCA 16
V_HNF1_01_M00132 TRANSFAC + 87970195 87970209 5.0E-06 GGTTAAAGTTCAACC 15
V_DR1_Q3_M00762 TRANSFAC + 87970194 87970206 2.0E-06 TGGTTAAAGTTCA 13
V_HEN1_02_M00058 TRANSFAC + 87968854 87968875 8.0E-06 GGAGGAAGCACCTGAGACCCAG 22
V_HEN1_02_M00058 TRANSFAC - 87968854 87968875 1.0E-06 CTGGGTCTCAGGTGCTTCCTCC 22
V_HNF4_Q6_01_M01031 TRANSFAC + 87970194 87970207 2.0E-06 TGGTTAAAGTTCAA 14
V_SRF_06_M02916 TRANSFAC + 87965716 87965732 4.0E-06 GTCTAAGAAAAAAAAAA 17
V_SRF_06_M02916 TRANSFAC + 87965717 87965733 8.0E-06 TCTAAGAAAAAAAAAAG 17
V_SRF_06_M02916 TRANSFAC + 87965718 87965734 0.0E+00 CTAAGAAAAAAAAAAGC 17
V_COREBINDINGFACTOR_Q6_M00722 TRANSFAC + 87970428 87970435 1.0E-05 TGTGGTTT 8
V_EFC_Q6_M00626 TRANSFAC + 87970452 87970465 7.0E-06 CAATACCAGGCACA 14
V_ARP1_01_M00155 TRANSFAC + 87970177 87970192 6.0E-06 CCAACCCCTGAGCCTA 16
V_RXRLXRB_01_M01198 TRANSFAC + 87970194 87970206 4.0E-06 TGGTTAAAGTTCA 13
V_HNF4_01_M00134 TRANSFAC + 87970191 87970209 3.0E-06 TAATGGTTAAAGTTCAACC 19
V_EHF_07_M02849 TRANSFAC - 87969887 87969902 2.0E-06 TCAAATTTCCTAAGAT 16
V_HNF1A_01_M02162 TRANSFAC + 87970195 87970208 7.0E-06 GGTTAAAGTTCAAC 14
V_EVI1_03_M00080 TRANSFAC + 87965204 87965214 9.0E-06 TGAGAAGATAA 11
V_AR_Q2_M00447 TRANSFAC + 87965397 87965411 9.0E-06 GATGCGTTCTGTTCT 15
V_ER_Q6_M00191 TRANSFAC - 87970271 87970289 6.0E-06 TCAAAGCCCAGTGACCTGA 19
Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns.
Developed at the Institute for Systems Biology in the Baliga Lab.
A Django site.   Powered by PostgreSQL