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CA3 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 761 carbonic anhydrase III, muscle specific chr8 + 86346055 - 86351555 86351055 Transcription Factor Binding Sites   Download all TFBS in the CA3 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints NFE2_bZIP_DBD_dimeric_11_1 SELEX + 86350167 86350177 4.0E-06 TATGACTCATT 11 NFE2_bZIP_DBD_dimeric_11_1 SELEX - 86350167 86350177 8.0E-06 AATGAGTCATA 11 NKX2-8_homeodomain_full_monomeric_9_1 SELEX - 86348124 86348132 3.0E-06 CCACTTGAA 9 SOX21_HMG_DBD_dimeric_15_1 SELEX - 86349607 86349621 4.0E-06 CACAATAGCAGTGTG 15 SOX4_HMG_DBD_dimeric_16_1 SELEX - 86349607 86349622 1.0E-05 ACACAATAGCAGTGTG 16 MSX2_homeodomain_DBD_dimeric_18_1 SELEX - 86348780 86348797 1.0E-06 ATGATTAACTACAAATTA 18 THRA_nuclearreceptor_FL_dimeric_18_1 SELEX + 86351020 86351037 1.0E-06 CTGACCTAATAAGGCCAT 18 THRA_nuclearreceptor_FL_dimeric_18_1 SELEX - 86351020 86351037 0.0E+00 ATGGCCTTATTAGGTCAG 18 BARX1_homeodomain_DBD_dimeric_17_1 SELEX - 86348780 86348796 0.0E+00 TGATTAACTACAAATTA 17 SRY_HMG_DBD_dimeric_15_1 SELEX + 86348207 86348221 3.0E-06 GAAAATAACATTGTC 15 SRY_HMG_DBD_dimeric_15_1 SELEX - 86349607 86349621 7.0E-06 CACAATAGCAGTGTG 15 SOX2_HMG_full_dimeric_17_1 SELEX + 86348206 86348222 5.0E-06 GGAAAATAACATTGTCA 17 SOX2_HMG_full_dimeric_17_1 SELEX - 86349606 86349622 8.0E-06 ACACAATAGCAGTGTGG 17 FOXC2_forkhead_DBD_monomeric_12_1 SELEX - 86349556 86349567 3.0E-06 ATAGTAAACAAA 12 SRF_MADS_DBD_dimeric_12_1 SELEX + 86351023 86351034 5.0E-06 ACCTAATAAGGC 12 FOXO1_forkhead_DBD_monomeric_8_1 SELEX - 86349557 86349564 7.0E-06 GTAAACAA 8 Sox17_HMG_DBD_dimeric_15_1 SELEX - 86349607 86349621 1.0E-06 CACAATAGCAGTGTG 15 Sox1_HMG_DBD_dimeric_13_1 SELEX - 86349608 86349620 8.0E-06 ACAATAGCAGTGT 13 FOXD2_forkhead_DBD_dimeric_14_1 SELEX + 86348209 86348222 3.0E-06 AAATAACATTGTCA 14 SRF_MA0083.1 JASPAR + 86351022 86351033 4.0E-06 GACCTAATAAGG 12 Klf4_MA0039.2 JASPAR - 86351008 86351017 1.0E-05 AGGGTGGGGC 10 THRB_nuclearreceptor_DBD_dimeric_18_1 SELEX + 86351020 86351037 0.0E+00 CTGACCTAATAAGGCCAT 18 THRB_nuclearreceptor_DBD_dimeric_18_1 SELEX - 86351020 86351037 1.0E-06 ATGGCCTTATTAGGTCAG 18 FOXD3_forkhead_DBD_dimeric_14_1 SELEX + 86348209 86348222 3.0E-06 AAATAACATTGTCA 14 Foxc1_forkhead_DBD_dimeric_11_1 SELEX - 86349554 86349564 1.0E-05 GTAAACAAATG 11 HNF1A_homeodomain_full_dimeric_15_1 SELEX - 86348788 86348802 1.0E-06 GAGCAATGATTAACT 15 NFAT5_NFAT_DBD_dimeric_14_1 SELEX + 86348204 86348217 7.0E-06 TTGGAAAATAACAT 14 SOX14_HMG_DBD_dimeric_13_1 SELEX + 86348208 86348220 1.0E-06 AAAATAACATTGT 13 SOX14_HMG_DBD_dimeric_13_1 SELEX - 86349608 86349620 2.0E-06 ACAATAGCAGTGT 13 SOX18_HMG_full_dimeric_15_1 SELEX - 86349607 86349621 2.0E-06 CACAATAGCAGTGTG 15 SOX15_HMG_full_dimeric_15_1 SELEX + 86348207 86348221 8.0E-06 GAAAATAACATTGTC 15 SOX15_HMG_full_dimeric_15_1 SELEX - 86349607 86349621 8.0E-06 CACAATAGCAGTGTG 15 SOX7_HMG_full_dimeric_17_1 SELEX - 86349606 86349622 7.0E-06 ACACAATAGCAGTGTGG 17 SOX14_HMG_DBD_dimeric_12_1 SELEX + 86348208 86348219 5.0E-06 AAAATAACATTG 12 Msx3_homeodomain_DBD_dimeric_18_1 SELEX - 86348780 86348797 0.0E+00 ATGATTAACTACAAATTA 18 HNF1B_homeodomain_full_dimeric_13_1 SELEX + 86348789 86348801 2.0E-06 GTTAATCATTGCT 13 NKX2-3_homeodomain_full_monomeric_10_1 SELEX - 86348124 86348133 9.0E-06 GCCACTTGAA 10 HESX1_homeodomain_DBD_dimeric_15_1 SELEX + 86348779 86348793 3.0E-06 ATAATTTGTAGTTAA 15 LHX9_homeodomain_DBD_dimeric_13_1 SELEX - 86348780 86348792 4.0E-06 TAACTACAAATTA 13 PRDM1_C2H2_full_monomeric-or-dimeric_15_1 SELEX + 86348227 86348241 9.0E-06 AGAACGTAAAAGTTA 15 JDP2_bZIP_full_dimeric_9_1 SELEX + 86350168 86350176 2.0E-06 ATGACTCAT 9 JDP2_bZIP_full_dimeric_9_1 SELEX - 86350168 86350176 4.0E-06 ATGAGTCAT 9 SRF_MADS_full_dimeric_16_1 SELEX + 86351021 86351036 2.0E-06 TGACCTAATAAGGCCA 16 SRF_MADS_full_dimeric_16_1 SELEX - 86351021 86351036 3.0E-06 TGGCCTTATTAGGTCA 16 Sox11_HMG_DBD_dimeric_15_1 SELEX - 86349607 86349621 5.0E-06 CACAATAGCAGTGTG 15 FOXB1_forkhead_full_monomeric_9_1 SELEX - 86349557 86349565 7.0E-06 AGTAAACAA 9 FOXO3_forkhead_full_monomeric_8_1 SELEX - 86349557 86349564 7.0E-06 GTAAACAA 8 HNF1B_homeodomain_full_dimeric_15_1 SELEX - 86348788 86348802 1.0E-06 GAGCAATGATTAACT 15 Sox3_HMG_DBD_dimeric_17_1 SELEX + 86348206 86348222 1.0E-05 GGAAAATAACATTGTCA 17 Sox3_HMG_DBD_dimeric_17_1 SELEX - 86349606 86349622 2.0E-06 ACACAATAGCAGTGTGG 17 MSX1_homeodomain_DBD_dimeric_18_1 SELEX - 86348780 86348797 0.0E+00 ATGATTAACTACAAATTA 18 Sox1_HMG_DBD_dimeric_15_1 SELEX + 86348207 86348221 5.0E-06 GAAAATAACATTGTC 15 Sox1_HMG_DBD_dimeric_15_1 SELEX + 86349607 86349621 7.0E-06 CACACTGCTATTGTG 15 Sox1_HMG_DBD_dimeric_15_1 SELEX - 86349607 86349621 0.0E+00 CACAATAGCAGTGTG 15 FOXC1_forkhead_DBD_dimeric_13_1 SELEX - 86349554 86349566 9.0E-06 TAGTAAACAAATG 13 Irx3_homeodomain_DBD_dimeric_12_1 SELEX - 86350493 86350504 2.0E-06 CAACATGTAAAA 12 HNF1A_MA0046.1 JASPAR + 86348788 86348801 3.0E-06 AGTTAATCATTGCT 14 SOX9_HMG_full_dimeric_17_1 SELEX - 86349606 86349622 8.0E-06 ACACAATAGCAGTGTGG 17 Zfx_MA0146.1 JASPAR - 86348064 86348077 7.0E-06 GCAGCCTAGGCCTT 14 IRX5_homeodomain_DBD_dimeric_12_1 SELEX - 86350174 86350185 5.0E-06 TAACATAAAATG 12 V_HOXA9_01_M01351 TRANSFAC - 86350171 86350187 7.0E-06 ACTAACATAAAATGAGT 17 V_SRF_Q6_M00186 TRANSFAC + 86351022 86351035 4.0E-06 GACCTAATAAGGCC 14 V_CEBPG_Q6_M00622 TRANSFAC - 86350643 86350655 7.0E-06 CTCACTTAAAAGT 13 V_SPI1_01_M01203 TRANSFAC - 86349591 86349607 7.0E-06 GGAATCAGGAACTAAGG 17 V_STAT5A_Q6_M01890 TRANSFAC - 86350157 86350169 7.0E-06 ATATTTCTTAAAA 13 V_IPF1_02_M01234 TRANSFAC + 86351023 86351032 3.0E-06 ACCTAATAAG 10 V_OBOX5_05_M03066 TRANSFAC - 86349625 86349641 5.0E-06 ACAAGGGATTATTTGAT 17 V_XFD1_01_M00267 TRANSFAC - 86349554 86349567 8.0E-06 ATAGTAAACAAATG 14 V_FOXA2_04_M02749 TRANSFAC - 86349553 86349569 0.0E+00 ACATAGTAAACAAATGC 17 V_FOXD3_01_M00130 TRANSFAC - 86349624 86349635 7.0E-06 GATTATTTGATC 12 V_FOXO4_02_M00476 TRANSFAC + 86349554 86349567 2.0E-06 CATTTGTTTACTAT 14 V_SATB1_Q3_M01723 TRANSFAC - 86348815 86348830 7.0E-06 ATAAATAATGCCAGAA 16 V_FOXJ2_02_M00423 TRANSFAC + 86348208 86348221 4.0E-06 AAAATAACATTGTC 14 V_FOXJ1_04_M02854 TRANSFAC + 86349638 86349652 2.0E-06 TTGTCACAAAAATAC 15 V_RORA_Q4_M01138 TRANSFAC - 86351021 86351031 1.0E-06 TTATTAGGTCA 11 V_ZTA_Q2_M00711 TRANSFAC + 86348791 86348803 9.0E-06 TAATCATTGCTCA 13 V_EGR_Q6_M00807 TRANSFAC - 86350719 86350729 1.0E-05 GTGGGGGCAGG 11 V_NFAT3_Q3_M01734 TRANSFAC - 86348205 86348214 1.0E-05 TTATTTTCCA 10 V_NKX25_Q6_M02108 TRANSFAC - 86348123 86348133 8.0E-06 GCCACTTGAAT 11 V_NKX25_Q6_M02108 TRANSFAC - 86350645 86350655 7.0E-06 CTCACTTAAAA 11 V_FOXO3A_Q1_M01137 TRANSFAC - 86349554 86349565 2.0E-06 AGTAAACAAATG 12 V_POU3F2_02_M00464 TRANSFAC + 86350178 86350187 9.0E-06 TTATGTTAGT 10 V_HNF3_Q6_01_M01012 TRANSFAC + 86349553 86349570 5.0E-06 GCATTTGTTTACTATGTT 18 V_FOXJ1_03_M02750 TRANSFAC - 86349552 86349567 0.0E+00 ATAGTAAACAAATGCC 16 V_GATA_C_M00203 TRANSFAC - 86348822 86348832 7.0E-06 AGATAAATAAT 11 V_SP1_02_M01303 TRANSFAC - 86351002 86351012 3.0E-06 GGGGCGGGGGG 11 V_TCFAP2E_04_M02926 TRANSFAC - 86348808 86348821 7.0E-06 GCCAGAAAAAAAAA 14 V_TCFAP2E_04_M02926 TRANSFAC - 86348809 86348822 1.0E-06 TGCCAGAAAAAAAA 14 V_NKX62_Q2_M00489 TRANSFAC - 86348822 86348833 1.0E-05 GAGATAAATAAT 12 V_AP1_Q6_M00174 TRANSFAC + 86350167 86350177 7.0E-06 TATGACTCATT 11 V_SRF_C_M00215 TRANSFAC - 86351020 86351034 3.0E-06 GCCTTATTAGGTCAG 15 V_SRF_C_M00215 TRANSFAC + 86351023 86351037 1.0E-06 ACCTAATAAGGCCAT 15 V_BACH1_01_M00495 TRANSFAC - 86350165 86350179 0.0E+00 AAAATGAGTCATATT 15 V_SOX7_03_M02807 TRANSFAC - 86349547 86349568 7.0E-06 CATAGTAAACAAATGCCCTTAA 22 V_OBOX5_02_M01480 TRANSFAC - 86349625 86349641 5.0E-06 ACAAGGGATTATTTGAT 17 V_FREAC3_01_M00291 TRANSFAC - 86349554 86349569 5.0E-06 ACATAGTAAACAAATG 16 V_ZFP105_03_M02827 TRANSFAC - 86348804 86348818 1.0E-06 AGAAAAAAAAAAGAG 15 V_FOXO1_02_M00474 TRANSFAC + 86349554 86349567 4.0E-06 CATTTGTTTACTAT 14 V_HNF1_Q6_M00790 TRANSFAC + 86348787 86348804 6.0E-06 TAGTTAATCATTGCTCAC 18 V_NFAT_Q6_M00302 TRANSFAC + 86348202 86348213 8.0E-06 CTTTGGAAAATA 12 V_XFD3_01_M00269 TRANSFAC - 86349554 86349567 1.0E-06 ATAGTAAACAAATG 14 V_KROX_Q6_M00982 TRANSFAC + 86350719 86350732 3.0E-06 CCTGCCCCCACCCC 14 V_IRX4_01_M01410 TRANSFAC - 86350491 86350507 1.0E-06 AGGCAACATGTAAAATC 17 V_AP1_Q6_01_M00925 TRANSFAC + 86350168 86350176 4.0E-06 ATGACTCAT 9 V_HNF1_Q6_01_M01011 TRANSFAC - 86348785 86348805 4.0E-06 AGTGAGCAATGATTAACTACA 21 V_JUNDM2_04_M02876 TRANSFAC + 86350164 86350179 7.0E-06 AAATATGACTCATTTT 16 V_JUNDM2_04_M02876 TRANSFAC - 86350165 86350180 4.0E-06 TAAAATGAGTCATATT 16 V_SPIB_01_M01204 TRANSFAC - 86349591 86349607 8.0E-06 GGAATCAGGAACTAAGG 17 V_AP1_C_M00199 TRANSFAC - 86350168 86350176 8.0E-06 ATGAGTCAT 9 V_XFD2_01_M00268 TRANSFAC - 86349554 86349567 4.0E-06 ATAGTAAACAAATG 14 V_HB24_01_M01399 TRANSFAC - 86348785 86348799 7.0E-06 CAATGATTAACTACA 15 V_SRF_Q5_02_M01007 TRANSFAC - 86351020 86351038 0.0E+00 CATGGCCTTATTAGGTCAG 19 V_POU6F1_01_M00465 TRANSFAC + 86348820 86348830 1.0E-06 GCATTATTTAT 11 V_AP1_01_M00517 TRANSFAC - 86350166 86350178 9.0E-06 AAATGAGTCATAT 13 V_IRX3_01_M01318 TRANSFAC - 86350491 86350507 2.0E-06 AGGCAACATGTAAAATC 17 V_SRF_03_M01304 TRANSFAC + 86351022 86351034 3.0E-06 GACCTAATAAGGC 13 V_AP1_Q2_01_M00924 TRANSFAC + 86350169 86350180 8.0E-06 TGACTCATTTTA 12 V_IRX5_01_M01472 TRANSFAC - 86350491 86350507 3.0E-06 AGGCAACATGTAAAATC 17 V_ZFP691_04_M02937 TRANSFAC + 86350165 86350181 8.0E-06 AATATGACTCATTTTAT 17 V_IRX3_02_M01485 TRANSFAC - 86350491 86350507 2.0E-06 AGGCAACATGTAAAATC 17 V_AP1_Q4_01_M00926 TRANSFAC - 86350168 86350175 1.0E-05 TGAGTCAT 8 V_MTF1_06_M02882 TRANSFAC + 86350157 86350170 9.0E-06 TTTTAAGAAATATG 14 V_HAND1E47_01_M00222 TRANSFAC + 86348809 86348824 3.0E-06 TTTTTTTTCTGGCATT 16 V_NKX25_03_M01414 TRANSFAC - 86348121 86348136 2.0E-06 TGGGCCACTTGAATCA 16 V_HNF1_01_M00132 TRANSFAC + 86348788 86348802 2.0E-06 AGTTAATCATTGCTC 15 V_CACBINDINGPROTEIN_Q6_M00720 TRANSFAC - 86351010 86351018 8.0E-06 GAGGGTGGG 9 V_FOXL1_04_M02753 TRANSFAC - 86349553 86349569 1.0E-06 ACATAGTAAACAAATGC 17 V_FRA1_Q5_M01267 TRANSFAC - 86350168 86350175 1.0E-05 TGAGTCAT 8 V_FOXO3_01_M00477 TRANSFAC + 86349554 86349567 1.0E-06 CATTTGTTTACTAT 14 V_OTX2_01_M01387 TRANSFAC - 86349625 86349641 6.0E-06 ACAAGGGATTATTTGAT 17 V_SRF_01_M00152 TRANSFAC + 86351020 86351037 0.0E+00 CTGACCTAATAAGGCCAT 18 V_SRF_01_M00152 TRANSFAC - 86351020 86351037 2.0E-06 ATGGCCTTATTAGGTCAG 18 V_P53_04_M01652 TRANSFAC - 86348050 86348069 5.0E-06 GGCCTTGTCCCAACTGGTCT 20 V_SMAD_Q6_01_M00974 TRANSFAC + 86350613 86350623 0.0E+00 TAGCCAGACAG 11 V_SRF_Q5_01_M00922 TRANSFAC + 86351024 86351038 1.0E-06 CCTAATAAGGCCATG 15 V_SRF_Q4_M00810 TRANSFAC + 86351023 86351040 9.0E-06 ACCTAATAAGGCCATGCA 18 V_IRX2_01_M01405 TRANSFAC - 86350491 86350507 7.0E-06 AGGCAACATGTAAAATC 17 V_SRF_02_M01257 TRANSFAC + 86351022 86351039 0.0E+00 GACCTAATAAGGCCATGC 18 V_DMRT2_01_M01147 TRANSFAC - 86348233 86348248 5.0E-06 AATAATGTAACTTTTA 16 V_SRF_06_M02916 TRANSFAC - 86348803 86348819 3.0E-06 CAGAAAAAAAAAAGAGT 17 V_SRF_06_M02916 TRANSFAC - 86348804 86348820 2.0E-06 CCAGAAAAAAAAAAGAG 17 V_SRF_06_M02916 TRANSFAC - 86348805 86348821 7.0E-06 GCCAGAAAAAAAAAAGA 17 V_FOXJ2_01_M00422 TRANSFAC - 86349562 86349579 6.0E-06 ATCCAAGCAAACATAGTA 18 V_NFE2_Q6_M02104 TRANSFAC - 86349687 86349702 7.0E-06 AATGACTGACCACACT 16 V_HNF1A_Q5_M02013 TRANSFAC + 86348788 86348798 0.0E+00 AGTTAATCATT 11 V_FOXO1_01_M00473 TRANSFAC - 86349556 86349565 3.0E-06 AGTAAACAAA 10 V_HNF3B_Q6_M02014 TRANSFAC + 86349557 86349565 2.0E-06 TTGTTTACT 9 V_PITX2_01_M01447 TRANSFAC - 86349625 86349641 6.0E-06 ACAAGGGATTATTTGAT 17 V_UF1H3BETA_Q6_M01068 TRANSFAC - 86350717 86350730 8.0E-06 GGTGGGGGCAGGGA 14 V_HNF1A_01_M02162 TRANSFAC + 86348788 86348801 3.0E-06 AGTTAATCATTGCT 14 V_OBOX5_01_M01381 TRANSFAC - 86349625 86349641 3.0E-06 ACAAGGGATTATTTGAT 17 V_TCF3_05_M02920 TRANSFAC - 86348807 86348821 5.0E-06 GCCAGAAAAAAAAAA 15 V_TCF3_05_M02920 TRANSFAC - 86348808 86348822 5.0E-06 TGCCAGAAAAAAAAA 15 V_TCF3_05_M02920 TRANSFAC - 86348809 86348823 7.0E-06 ATGCCAGAAAAAAAA 15 V_OTX1_01_M01366 TRANSFAC - 86349625 86349641 1.0E-06 ACAAGGGATTATTTGAT 17 V_OBOX6_06_M03067 TRANSFAC + 86349625 86349641 3.0E-06 ATCAAATAATCCCTTGT 17 V_FOXK1_03_M02752 TRANSFAC - 86349553 86349569 2.0E-06 ACATAGTAAACAAATGC 17 V_PAX4_04_M00380 TRANSFAC + 86348778 86348807 6.0E-06 GATAATTTGTAGTTAATCATTGCTCACTCT 30 V_PAX2_02_M00486 TRANSFAC + 86350584 86350592 2.0E-06 AATAAACTC 9 V_NKX21_01_M01312 TRANSFAC - 86348121 86348136 4.0E-06 TGGGCCACTTGAATCA 16

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.