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ZIC3 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS Motifs 7547 Zic family member 3 chrX + 136643345 - 136648845 136648345 ZIC3_C2H2_full_monomeric_15_1 V_ZIC3_01_M00450 V_ZIC3_05_M02941 V_ZIC3_04_M02837 Transcription Factor Binding Sites   Download all TFBS in the ZIC3 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints SOX10_HMG_full_dimeric_16_1 SELEX + 136646610 136646625 3.0E-06 AAGAAGGTGAAGTGTT 16 Pax6_MA0069.1 JASPAR + 136650332 136650345 5.0E-06 TTTACACTTGATTG 14 SPIC_ETS_full_monomeric_14_1 SELEX - 136650318 136650331 0.0E+00 AAAAAGCGGAAGTA 14 YY2_C2H2_full_dimeric_12_1 SELEX - 136646744 136646755 9.0E-06 CCTGGCCGCCAT 12 POU3F3_POU_DBD_monomeric_12_1 SELEX + 136646345 136646356 7.0E-06 TTGCATGATTTA 12 SOX9_HMG_full_dimeric_16_1 SELEX + 136646610 136646625 1.0E-06 AAGAAGGTGAAGTGTT 16 FOXG1_forkhead_DBD_dimeric_17_1 SELEX - 136648535 136648551 6.0E-06 ACAAAGAAAAATAAGCA 17 FOXG1_forkhead_DBD_dimeric_17_1 SELEX - 136650330 136650346 8.0E-06 CCAATCAAGTGTAAAAA 17 POU3F2_POU_DBD_monomeric_13_1 SELEX + 136646344 136646356 4.0E-06 TTTGCATGATTTA 13 POU3F2_POU_DBD_monomeric_13_1 SELEX - 136646350 136646362 8.0E-06 TATGCTTAAATCA 13 NR2E1_nuclearreceptor_full_monomeric_9_1 SELEX - 136648278 136648286 3.0E-06 TAAAGTCAA 9 ELF4_ETS_full_monomeric_12_1 SELEX - 136650318 136650329 3.0E-06 AAAGCGGAAGTA 12 SOX8_HMG_DBD_dimeric_16_1 SELEX + 136646610 136646625 4.0E-06 AAGAAGGTGAAGTGTT 16 POU3F4_POU_DBD_monomeric_11_1 SELEX + 136646346 136646356 1.0E-05 TGCATGATTTA 11 GRHL1_CP2_full_dimeric_12_1 SELEX + 136651858 136651869 1.0E-06 AAAACTGGTTTT 12 GRHL1_CP2_full_dimeric_12_1 SELEX - 136651858 136651869 0.0E+00 AAAACCAGTTTT 12 EWSR1-FLI1_MA0149.1 JASPAR - 136648647 136648664 3.0E-06 GGGAGGAGGGGAAGAAAG 18 EWSR1-FLI1_MA0149.1 JASPAR - 136648655 136648672 6.0E-06 GGATAGGAGGGAGGAGGG 18 POU1F1_POU_DBD_monomeric_14_1 SELEX - 136646340 136646353 2.0E-06 ATCATGCAAATGAA 14 POU1F1_POU_DBD_monomeric_14_1 SELEX - 136648529 136648542 8.0E-06 AATAAGCAAAATAG 14 POU1F1_POU_DBD_monomeric_14_1 SELEX + 136650290 136650303 3.0E-06 CAAATGCTAATGAA 14 POU2F2_POU_DBD_monomeric_11_1 SELEX - 136646342 136646352 7.0E-06 TCATGCAAATG 11 SPIB_ETS_DBD_monomeric_14_1 SELEX - 136650318 136650331 0.0E+00 AAAAAGCGGAAGTA 14 NFKB2_NFAT_DBD_dimeric_13_1 SELEX + 136650790 136650802 5.0E-06 AGGGGCTTTCCCT 13 NFKB2_NFAT_DBD_dimeric_13_1 SELEX - 136650790 136650802 6.0E-06 AGGGAAAGCCCCT 13 LEF1_HMG_DBD_monomeric_15_1 SELEX + 136650808 136650822 9.0E-06 CAAGAACAAAGACAT 15 REL_MA0101.1 JASPAR + 136650791 136650800 6.0E-06 GGGGCTTTCC 10 POU3F3_POU_DBD_monomeric_13_1 SELEX - 136646341 136646353 5.0E-06 ATCATGCAAATGA 13 HOXC12_homeodomain_DBD_monomeric_9_1 SELEX - 136650328 136650336 8.0E-06 GTAAAAAAA 9 ELF3_ETS_full_monomeric_13_1 SELEX + 136646647 136646659 1.0E-05 GAGCAGGAAGTGA 13 ELF3_ETS_full_monomeric_13_1 SELEX - 136650317 136650329 3.0E-06 AAAGCGGAAGTAA 13 SP1_MA0079.2 JASPAR + 136648654 136648663 9.0E-06 CCCCTCCTCC 10 POU2F3_POU_DBD_dimeric_12_1 SELEX - 136648534 136648545 5.0E-06 AAAAATAAGCAA 12 NFATC1_NFAT_full_dimeric_20_1 SELEX - 136650299 136650318 2.0E-06 AACCGAAAGTTAGTTTTCAT 20 TFCP2_CP2_full_dimeric_10_1 SELEX + 136651859 136651868 4.0E-06 AAACTGGTTT 10 TFCP2_CP2_full_dimeric_10_1 SELEX - 136651859 136651868 3.0E-06 AAACCAGTTT 10 POU3F1_POU_DBD_monomeric_12_1 SELEX - 136646341 136646352 7.0E-06 TCATGCAAATGA 12 POU3F1_POU_DBD_monomeric_12_1 SELEX + 136650291 136650302 3.0E-06 AAATGCTAATGA 12 PRDM1_C2H2_full_monomeric-or-dimeric_15_1 SELEX + 136646651 136646665 1.0E-05 AGGAAGTGAAAGGCT 15 PRDM1_C2H2_full_monomeric-or-dimeric_15_1 SELEX - 136650317 136650331 8.0E-06 AAAAAGCGGAAGTAA 15 MEOX2_homeodomain_DBD_dimeric_17_1 SELEX - 136651216 136651232 7.0E-06 GTAATTACCTTCATGTG 17 EHF_ETS_full_monomeric_12_1 SELEX - 136650318 136650329 3.0E-06 AAAGCGGAAGTA 12 Pou5f1_MA0142.1 JASPAR + 136650286 136650300 6.0E-06 CATACAAATGCTAAT 15 ELF5_ETS_full_monomeric_11_1 SELEX - 136650318 136650328 4.0E-06 AAGCGGAAGTA 11 POU2F1_POU_DBD_monomeric_12_1 SELEX - 136646342 136646353 4.0E-06 ATCATGCAAATG 12 ELF1_ETS_full_monomeric_12_1 SELEX - 136650318 136650329 4.0E-06 AAAGCGGAAGTA 12 ELF3_ETS_DBD_monomeric_12_1 SELEX - 136650318 136650329 6.0E-06 AAAGCGGAAGTA 12 GRHL1_CP2_DBD_dimeric_10_1 SELEX - 136651859 136651868 5.0E-06 AAACCAGTTT 10 ETV6_ETS_full_monomeric_10_1 SELEX - 136650318 136650327 2.0E-06 AGCGGAAGTA 10 SPI1_ETS_full_monomeric_14_1 SELEX - 136650318 136650331 0.0E+00 AAAAAGCGGAAGTA 14 POU3F3_POU_DBD_dimeric_12_1 SELEX - 136648534 136648545 5.0E-06 AAAAATAAGCAA 12 POU3F2_POU_DBD_monomeric_12_1 SELEX - 136646341 136646352 5.0E-06 TCATGCAAATGA 12 POU3F2_POU_DBD_monomeric_12_1 SELEX + 136650291 136650302 2.0E-06 AAATGCTAATGA 12 FOXC1_forkhead_DBD_dimeric_13_1 SELEX - 136648535 136648547 9.0E-06 AGAAAAATAAGCA 13 RREB1_MA0073.1 JASPAR - 136646204 136646223 5.0E-06 CCTCCCACCAACCCCAACCG 20 RREB1_MA0073.1 JASPAR + 136648624 136648643 8.0E-06 CCCGCCAACACCCCCTCCCT 20 V_SPI1_01_M01203 TRANSFAC - 136650315 136650331 0.0E+00 AAAAAGCGGAAGTAACC 17 V_ELK1_04_M01165 TRANSFAC - 136650318 136650328 9.0E-06 AAGCGGAAGTA 11 V_ZFP187_03_M02830 TRANSFAC - 136650340 136650353 8.0E-06 AGATGTGCCAATCA 14 V_ATF5_01_M01295 TRANSFAC - 136646605 136646615 8.0E-06 CTTCTTTCTTA 11 V_MAFK_03_M02776 TRANSFAC + 136648529 136648543 5.0E-06 CTATTTTGCTTATTT 15 V_YY1_02_M00069 TRANSFAC + 136648126 136648145 6.0E-06 CGGCTGCCATGTTCTCCGCT 20 V_NF1A_Q6_M02103 TRANSFAC - 136650342 136650357 5.0E-06 TAGGAGATGTGCCAAT 16 V_BCL6_01_M01183 TRANSFAC + 136648530 136648545 3.0E-06 TATTTTGCTTATTTTT 16 V_BCL6_01_M01183 TRANSFAC + 136648534 136648549 3.0E-06 TTGCTTATTTTTCTTT 16 V_MMEF2_Q6_M00405 TRANSFAC - 136651909 136651924 1.0E-06 CTGCTTAAAAAAAATC 16 V_SPIB_02_M02041 TRANSFAC - 136650318 136650327 1.0E-06 AGCGGAAGTA 10 V_POU5F1_02_M02245 TRANSFAC + 136650286 136650300 6.0E-06 CATACAAATGCTAAT 15 V_RELBP52_01_M01239 TRANSFAC + 136650791 136650800 4.0E-06 GGGGCTTTCC 10 V_MAFB_03_M02879 TRANSFAC - 136650327 136650341 4.0E-06 CAAGTGTAAAAAAAA 15 V_OCT1_Q5_01_M00930 TRANSFAC + 136646341 136646351 4.0E-06 TCATTTGCATG 11 V_IRF_Q6_01_M00972 TRANSFAC + 136646652 136646662 4.0E-06 GGAAGTGAAAG 11 V_OCT1_01_M00135 TRANSFAC + 136650287 136650305 9.0E-06 ATACAAATGCTAATGAAAA 19 V_POU2F3_01_M01476 TRANSFAC - 136646339 136646354 2.0E-06 AATCATGCAAATGAAT 16 V_POU2F3_01_M01476 TRANSFAC + 136650289 136650304 4.0E-06 ACAAATGCTAATGAAA 16 V_SP1_03_M02281 TRANSFAC + 136648654 136648663 9.0E-06 CCCCTCCTCC 10 V_OCT_C_M00210 TRANSFAC + 136646340 136646352 1.0E-06 TTCATTTGCATGA 13 V_OCT_C_M00210 TRANSFAC - 136650291 136650303 3.0E-06 TTCATTAGCATTT 13 V_PU1_Q4_M01172 TRANSFAC - 136646646 136646664 6.0E-06 GCCTTTCACTTCCTGCTCC 19 V_PU1_Q4_M01172 TRANSFAC + 136650312 136650330 2.0E-06 TTCGGTTACTTCCGCTTTT 19 V_TCFAP2E_04_M02926 TRANSFAC - 136650327 136650340 7.0E-06 AAGTGTAAAAAAAA 14 V_TCFAP2E_04_M02926 TRANSFAC - 136651910 136651923 1.0E-06 TGCTTAAAAAAAAT 14 V_TCFAP2E_04_M02926 TRANSFAC - 136651928 136651941 6.0E-06 CACTTAAAAGAAAA 14 V_BCL6_02_M01185 TRANSFAC - 136650270 136650283 9.0E-06 TGCCTTCCACGAAT 14 V_ETS_Q4_M00771 TRANSFAC - 136646650 136646661 2.0E-06 TTTCACTTCCTG 12 V_HNF6_Q6_M00639 TRANSFAC - 136648275 136648286 2.0E-06 TAAAGTCAATCA 12 V_SPIC_01_M02042 TRANSFAC - 136650318 136650327 1.0E-06 AGCGGAAGTA 10 V_ELF4_04_M02850 TRANSFAC - 136651906 136651922 1.0E-06 GCTTAAAAAAAATCCGT 17 V_ELF4_04_M02850 TRANSFAC - 136651908 136651924 8.0E-06 CTGCTTAAAAAAAATCC 17 V_POU3F2_01_M00463 TRANSFAC - 136646464 136646477 8.0E-06 CTGACTTAAATTAT 14 V_PR_Q2_M00960 TRANSFAC - 136646722 136646731 9.0E-06 AATAGAACAT 10 V_ZFP105_03_M02827 TRANSFAC - 136648538 136648552 8.0E-06 CACAAAGAAAAATAA 15 V_NKX31_02_M02782 TRANSFAC - 136651931 136651947 5.0E-06 GTGACCCACTTAAAAGA 17 V_NKX26_01_M01322 TRANSFAC - 136651931 136651946 6.0E-06 TGACCCACTTAAAAGA 16 V_CREL_01_M00053 TRANSFAC + 136650791 136650800 6.0E-06 GGGGCTTTCC 10 V_ZBED6_01_M01598 TRANSFAC + 136651473 136651484 2.0E-06 CGAGCTCGCCTG 12 V_ERF_01_M01984 TRANSFAC - 136650318 136650327 5.0E-06 AGCGGAAGTA 10 V_ZBP89_Q4_M01816 TRANSFAC + 136648617 136648626 6.0E-06 TCCTCCCCCC 10 V_MAZ_Q6_01_M02023 TRANSFAC - 136648653 136648666 4.0E-06 GAGGGAGGAGGGGA 14 V_ZBTB7B_03_M02826 TRANSFAC + 136646392 136646406 9.0E-06 TACCCCCCCAAAGAA 15 V_CMYB_01_M00004 TRANSFAC + 136646196 136646213 6.0E-06 GCCAAGGGCGGTTGGGGT 18 V_GADP_01_M01258 TRANSFAC - 136646647 136646658 6.0E-06 CACTTCCTGCTC 12 V_OCT1_04_M00138 TRANSFAC + 136650285 136650307 2.0E-06 CCATACAAATGCTAATGAAAACT 23 V_REX1_03_M01744 TRANSFAC + 136646741 136646752 3.0E-06 GAGATGGCGGCC 12 V_REX1_03_M01744 TRANSFAC - 136648127 136648138 6.0E-06 AACATGGCAGCC 12 V_TAL1BETAE47_01_M00065 TRANSFAC + 136646714 136646729 3.0E-06 TTGATCAGATGTTCTA 16 V_SPIB_01_M01204 TRANSFAC - 136650315 136650331 0.0E+00 AAAAAGCGGAAGTAACC 17 V_TEL2_Q6_M00678 TRANSFAC - 136646650 136646659 4.0E-06 TCACTTCCTG 10 V_ERBETA_Q5_M01875 TRANSFAC - 136646628 136646642 9.0E-06 GTCTGCCTGGCCCAG 15 V_VMYB_01_M00003 TRANSFAC - 136649568 136649577 6.0E-06 TATAACGGAA 10 V_STAT4_Q5_M02117 TRANSFAC - 136651929 136651938 2.0E-06 TTAAAAGAAA 10 V_ISGF3G_03_M02771 TRANSFAC - 136650307 136650321 9.0E-06 AGTAACCGAAAGTTA 15 V_POU6F1_01_M00465 TRANSFAC - 136646464 136646474 2.0E-06 ACTTAAATTAT 11 V_SOX11_03_M02795 TRANSFAC + 136650807 136650823 6.0E-06 GCAAGAACAAAGACATG 17 V_BLIMP1_Q6_M01066 TRANSFAC + 136646650 136646665 1.0E-06 CAGGAAGTGAAAGGCT 16 V_OCT1_B_M00342 TRANSFAC - 136646342 136646351 5.0E-06 CATGCAAATG 10 V_OCT_Q6_M00795 TRANSFAC + 136646341 136646351 3.0E-06 TCATTTGCATG 11 V_PAX8_B_M00328 TRANSFAC + 136646339 136646356 9.0E-06 ATTCATTTGCATGATTTA 18 V_ELK1_01_M00007 TRANSFAC + 136646646 136646661 7.0E-06 GGAGCAGGAAGTGAAA 16 V_ELK1_01_M00007 TRANSFAC - 136650315 136650330 3.0E-06 AAAAGCGGAAGTAACC 16 V_IRF7_01_M00453 TRANSFAC + 136646162 136646179 7.0E-06 GAGGAAATCCAAACTTTT 18 V_GR_Q6_02_M01836 TRANSFAC + 136646360 136646372 7.0E-06 ATATTTGTTCTCT 13 V_MTF1_06_M02882 TRANSFAC - 136648530 136648543 1.0E-06 AAATAAGCAAAATA 14 V_NFYC_Q5_M02107 TRANSFAC + 136648151 136648164 3.0E-06 CTGCCAATCAGCCT 14 V_NKX25_03_M01414 TRANSFAC - 136651931 136651946 1.0E-05 TGACCCACTTAAAAGA 16 V_GABPBETA_Q3_M01876 TRANSFAC - 136650317 136650327 4.0E-06 AGCGGAAGTAA 11 V_EHF_06_M02745 TRANSFAC - 136650317 136650331 1.0E-06 AAAAAGCGGAAGTAA 15 V_MYF6_04_M02885 TRANSFAC - 136648551 136648565 8.0E-06 ACTAACAGGCGCGCA 15 V_OCT2_01_M01368 TRANSFAC - 136646339 136646354 3.0E-06 AATCATGCAAATGAAT 16 V_OCT2_01_M01368 TRANSFAC + 136650289 136650304 3.0E-06 ACAAATGCTAATGAAA 16 V_OCT1_Q6_M00195 TRANSFAC - 136646340 136646354 1.0E-05 AATCATGCAAATGAA 15 V_EBNA1_01_M01745 TRANSFAC + 136646562 136646577 1.0E-06 GGTAAGATGTGCTACC 16 V_EBNA1_01_M01745 TRANSFAC - 136646562 136646577 3.0E-06 GGTAGCACATCTTACC 16 V_PARP_Q3_M01211 TRANSFAC - 136646727 136646736 2.0E-06 TAGGAAATAG 10 V_FPM315_01_M01587 TRANSFAC - 136648611 136648622 4.0E-06 GGAGGAGGAGGG 12 V_FPM315_01_M01587 TRANSFAC - 136648614 136648625 0.0E+00 GGGGGAGGAGGA 12 V_FPM315_01_M01587 TRANSFAC - 136648655 136648666 0.0E+00 GAGGGAGGAGGG 12 V_STAT6_02_M00500 TRANSFAC - 136646163 136646170 1.0E-05 GATTTCCT 8 V_PLZF_02_M01075 TRANSFAC + 136648558 136648586 3.0E-06 CTGTTAGTTTGTTAAACCAGATCTAGTCC 29 V_ETS1_B_M00339 TRANSFAC + 136646649 136646663 1.0E-05 GCAGGAAGTGAAAGG 15 V_TITF1_Q3_M00432 TRANSFAC - 136650335 136650344 5.0E-06 AATCAAGTGT 10 V_SRF_06_M02916 TRANSFAC - 136651905 136651921 1.0E-06 CTTAAAAAAAATCCGTA 17 V_SRF_06_M02916 TRANSFAC - 136651906 136651922 2.0E-06 GCTTAAAAAAAATCCGT 17 V_SRF_06_M02916 TRANSFAC - 136651923 136651939 5.0E-06 CTTAAAAGAAAAATGCT 17 V_EWSR1FLI1_01_M02252 TRANSFAC - 136648647 136648664 3.0E-06 GGGAGGAGGGGAAGAAAG 18 V_EWSR1FLI1_01_M02252 TRANSFAC - 136648655 136648672 6.0E-06 GGATAGGAGGGAGGAGGG 18 V_CMAF_01_M01070 TRANSFAC - 136646466 136646484 5.0E-06 TTCACTGCTGACTTAAATT 19 V_CMAF_01_M01070 TRANSFAC + 136648530 136648548 9.0E-06 TATTTTGCTTATTTTTCTT 19 V_NFYA_Q5_M02106 TRANSFAC + 136648170 136648183 8.0E-06 CGGCCAATGGGCAG 14 V_P300_01_M00033 TRANSFAC + 136648263 136648276 2.0E-06 GCGAGGAGTGAGTG 14 V_ELK1_03_M01163 TRANSFAC - 136650318 136650328 4.0E-06 AAGCGGAAGTA 11 V_TCF3_05_M02920 TRANSFAC - 136651910 136651924 8.0E-06 CTGCTTAAAAAAAAT 15 V_SPI1_02_M02043 TRANSFAC - 136650318 136650327 3.0E-06 AGCGGAAGTA 10 V_PAX6_01_M00097 TRANSFAC + 136650328 136650348 3.0E-06 TTTTTTTACACTTGATTGGCA 21 V_NANOG_02_M01247 TRANSFAC + 136650805 136650824 6.0E-06 TTGCAAGAACAAAGACATGG 20 V_OCT4_01_M01125 TRANSFAC + 136650286 136650300 2.0E-06 CATACAAATGCTAAT 15

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.