Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

TRPV1 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 7442 transient receptor potential cation channel, subfamily V, member 1 chr17 - 3512205 - 3517705 3512705 Transcription Factor Binding Sites   Download all TFBS in the TRPV1 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints NFE2_bZIP_DBD_dimeric_11_1 SELEX - 3516029 3516039 5.0E-06 AGTGACTCATC 11 RARB_nuclearreceptor_full_dimeric_16_1 SELEX - 3512399 3512414 4.0E-06 TGAGGTCAGGAGTTCA 16 MEF2D_MADS_DBD_dimeric_12_1 SELEX - 3512351 3512362 2.0E-06 ACTAAAAATACA 12 Tp53_p53l_DBD_dimeric_18_2 SELEX - 3512467 3512484 8.0E-06 TTCTTGGCCGGGCATGTT 18 MEF2A_MADS_DBD_dimeric_12_1 SELEX - 3512351 3512362 6.0E-06 ACTAAAAATACA 12 RARA_nuclearreceptor_DBD_dimeric_18_2 SELEX - 3512396 3512413 2.0E-06 GAGGTCAGGAGTTCAAGA 18 NFKB2_NFAT_DBD_dimeric_13_1 SELEX - 3512368 3512380 9.0E-06 TGGGGATACCCCG 13 MEF2B_MADS_full_dimeric_12_1 SELEX - 3512351 3512362 3.0E-06 ACTAAAAATACA 12 NR2F1_nuclearreceptor_DBD_dimeric_16_1 SELEX - 3512398 3512413 1.0E-06 GAGGTCAGGAGTTCAA 16 JDP2_bZIP_full_dimeric_9_1 SELEX + 3516030 3516038 1.0E-05 ATGAGTCAC 9 Nr2f6_nuclearreceptor_DBD_dimeric_15_1 SELEX - 3512399 3512413 0.0E+00 GAGGTCAGGAGTTCA 15 RARG_nuclearreceptor_full_dimeric_16_1 SELEX - 3512398 3512413 2.0E-06 GAGGTCAGGAGTTCAA 16 RARA_nuclearreceptor_full_dimeric_15_1 SELEX - 3512399 3512413 5.0E-06 GAGGTCAGGAGTTCA 15 V_XFD1_01_M00267 TRANSFAC + 3515925 3515938 7.0E-06 TTTGTAAACACTTG 14 V_FOXA2_04_M02749 TRANSFAC + 3515923 3515939 5.0E-06 AATTTGTAAACACTTGC 17 V_EAR2_Q2_M01728 TRANSFAC - 3513936 3513949 3.0E-06 TTCCCTTTGCCCAT 14 V_PITX2_Q6_M02114 TRANSFAC - 3512318 3512327 1.0E-06 TGTAATCCCA 10 V_PITX2_Q6_M02114 TRANSFAC - 3512447 3512456 1.0E-06 TGTAATCCCA 10 V_MEF2A_Q6_M02024 TRANSFAC + 3512353 3512362 4.0E-06 TATTTTTAGT 10 V_LXRB_RXRA_Q5_M02021 TRANSFAC - 3512400 3512414 2.0E-06 TGAGGTCAGGAGTTC 15 V_HNF1_C_M00206 TRANSFAC + 3515940 3515956 2.0E-06 AGTTGATTCTTATACAC 17 V_RPC155_01_M01798 TRANSFAC - 3512394 3512409 0.0E+00 TCAGGAGTTCAAGACC 16 V_HMX1_01_M00433 TRANSFAC - 3512422 3512431 5.0E-06 CAAGTGGGTG 10 V_JUNDM2_04_M02876 TRANSFAC + 3516026 3516041 9.0E-06 ACAGATGAGTCACTCA 16 V_JUNDM2_04_M02876 TRANSFAC - 3516027 3516042 8.0E-06 CTGAGTGACTCATCTG 16 V_AP1_01_M00517 TRANSFAC - 3516028 3516040 8.0E-06 GAGTGACTCATCT 13 V_FXR_IR1_Q6_M00767 TRANSFAC - 3512414 3512426 8.0E-06 GGGTGAATCACCT 13 V_FOXL1_04_M02753 TRANSFAC + 3515923 3515939 5.0E-06 AATTTGTAAACACTTGC 17 V_BDP1_01_M01796 TRANSFAC + 3512394 3512405 2.0E-06 GGTCTTGAACTC 12 V_PITX2_Q2_M00482 TRANSFAC - 3512317 3512327 1.0E-06 TGTAATCCCAG 11 V_PITX2_Q2_M00482 TRANSFAC - 3512446 3512456 1.0E-06 TGTAATCCCAG 11 V_T3RBETA_Q6_01_M02119 TRANSFAC - 3512406 3512422 2.0E-06 GAATCACCTGAGGTCAG 17 V_LXRA_RXRA_Q3_M00647 TRANSFAC - 3512402 3512416 1.0E-06 CCTGAGGTCAGGAGT 15 V_NFE2_01_M00037 TRANSFAC + 3516028 3516038 9.0E-06 AGATGAGTCAC 11 V_ARP1_01_M00155 TRANSFAC + 3512399 3512414 1.0E-06 TGAACTCCTGACCTCA 16 V_RNF96_01_M01199 TRANSFAC - 3515910 3515919 7.0E-06 GCCCGCAGCC 10 V_FOXK1_03_M02752 TRANSFAC + 3515923 3515939 6.0E-06 AATTTGTAAACACTTGC 17 V_PAX4_04_M00380 TRANSFAC - 3516027 3516056 1.0E-05 AAAAAAAAAGATCCCTGAGTGACTCATCTG 30 V_T3RALPHA_Q6_M01724 TRANSFAC - 3512406 3512416 5.0E-06 CCTGAGGTCAG 11

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.