Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

VAV2 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 7410 vav 2 guanine nucleotide exchange factor chr9 - 136856946 - 136862446 136857446 Transcription Factor Binding Sites   Download all TFBS in the VAV2 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints TBX20_TBX_full_monomeric_11_1 SELEX - 136860283 136860293 2.0E-06 AAGGTGTGATG 11 CTCF_MA0139.1 JASPAR - 136859686 136859704 0.0E+00 GCACCACCAGGGGGCAGCA 19 SOX21_HMG_DBD_dimeric_15_1 SELEX + 136859668 136859682 8.0E-06 AACAATGCCATGGGT 15 SOX21_HMG_DBD_dimeric_15_1 SELEX - 136859668 136859682 4.0E-06 ACCCATGGCATTGTT 15 SRY_HMG_DBD_dimeric_15_1 SELEX + 136859668 136859682 3.0E-06 AACAATGCCATGGGT 15 SRY_HMG_DBD_dimeric_15_1 SELEX - 136859668 136859682 2.0E-06 ACCCATGGCATTGTT 15 SOX2_HMG_full_dimeric_17_1 SELEX + 136859667 136859683 4.0E-06 CAACAATGCCATGGGTA 17 SOX2_HMG_full_dimeric_17_1 SELEX - 136859667 136859683 4.0E-06 TACCCATGGCATTGTTG 17 TBX1_TBX_DBD_dimeric_23_1 SELEX + 136860256 136860278 1.0E-06 CTGCACACCTCCAGGGGGCGAGA 23 TBX1_TBX_DBD_dimeric_23_1 SELEX - 136860256 136860278 2.0E-06 TCTCGCCCCCTGGAGGTGTGCAG 23 Tp53_p53l_DBD_dimeric_18_2 SELEX + 136855699 136855716 7.0E-06 ATCCTGCCCGAGCAAGTC 18 Sox17_HMG_DBD_dimeric_15_1 SELEX + 136859668 136859682 5.0E-06 AACAATGCCATGGGT 15 TFAP2C_TFAP_full_dimeric_13_1 SELEX + 136858507 136858519 8.0E-06 TGCCCAGCGGGCA 13 TFAP2C_TFAP_full_dimeric_13_1 SELEX - 136858507 136858519 8.0E-06 TGCCCGCTGGGCA 13 Klf4_MA0039.2 JASPAR - 136858630 136858639 3.0E-06 AGGGTGTGGC 10 RUNX3_RUNX_full_monomeric_10_1 SELEX + 136860587 136860596 1.0E-06 AAACCACAAA 10 Egr1_C2H2_mouse-DBD_mutant_DBD_monomeric_16_1 SELEX + 136858030 136858045 2.0E-06 CCCCGCCCCCCCACTT 16 T_MA0009.1 JASPAR - 136860284 136860294 9.0E-06 CAAGGTGTGAT 11 RUNX2_RUNX_DBD_monomeric_9_1 SELEX + 136860587 136860595 8.0E-06 AAACCACAA 9 HNF1A_homeodomain_full_dimeric_15_1 SELEX + 136855998 136856012 1.0E-05 GGGTAATCATTACCC 15 HNF1A_homeodomain_full_dimeric_15_1 SELEX - 136855998 136856012 8.0E-06 GGGTAATGATTACCC 15 NR2E1_nuclearreceptor_full_dimeric_14_1 SELEX + 136859286 136859299 1.0E-06 AAATCAGAAAGCCA 14 SP1_MA0079.2 JASPAR + 136858030 136858039 7.0E-06 CCCCGCCCCC 10 TBR1_TBX_full_monomeric_11_1 SELEX - 136860283 136860293 7.0E-06 AAGGTGTGATG 11 ZIC3_C2H2_full_monomeric_15_1 SELEX + 136857523 136857537 9.0E-06 GGTCCCCCGCTGCGC 15 SOX18_HMG_full_dimeric_15_1 SELEX + 136859668 136859682 3.0E-06 AACAATGCCATGGGT 15 SOX18_HMG_full_dimeric_15_1 SELEX - 136859668 136859682 5.0E-06 ACCCATGGCATTGTT 15 SOX15_HMG_full_dimeric_15_1 SELEX + 136859668 136859682 2.0E-06 AACAATGCCATGGGT 15 SOX7_HMG_full_dimeric_17_1 SELEX + 136859667 136859683 5.0E-06 CAACAATGCCATGGGTA 17 SOX7_HMG_full_dimeric_17_1 SELEX - 136859667 136859683 9.0E-06 TACCCATGGCATTGTTG 17 HNF1B_homeodomain_full_dimeric_13_1 SELEX + 136855999 136856011 7.0E-06 GGTAATCATTACC 13 HNF1B_homeodomain_full_dimeric_13_1 SELEX - 136855999 136856011 7.0E-06 GGTAATGATTACC 13 TBX21_TBX_full_monomeric_10_1 SELEX - 136860284 136860293 3.0E-06 AAGGTGTGAT 10 PPARG_MA0066.1 JASPAR + 136855996 136856015 2.0E-06 CTGGGTAATCATTACCCAGT 20 TBX20_TBX_DBD_monomeric_15_1 SELEX - 136860282 136860296 9.0E-06 TCCAAGGTGTGATGG 15 Zfp740_C2H2_DBD_monomeric_10_1 SELEX + 136858034 136858043 1.0E-05 GCCCCCCCAC 10 RUNX1_MA0002.2 JASPAR - 136860587 136860597 1.0E-06 CTTTGTGGTTT 11 THRB_nuclearreceptor_DBD_dimeric_19_1 SELEX + 136858545 136858563 7.0E-06 GTGACATGAGTGAGGGCAG 19 THRB_nuclearreceptor_DBD_dimeric_19_1 SELEX - 136858545 136858563 8.0E-06 CTGCCCTCACTCATGTCAC 19 REST_MA0138.2 JASPAR - 136858588 136858608 9.0E-06 ATCAGCACCGGGGCCGGCTGC 21 HNF1B_homeodomain_full_dimeric_15_1 SELEX + 136855998 136856012 7.0E-06 GGGTAATCATTACCC 15 HNF1B_homeodomain_full_dimeric_15_1 SELEX - 136855998 136856012 7.0E-06 GGGTAATGATTACCC 15 Sox3_HMG_DBD_dimeric_17_1 SELEX + 136859667 136859683 8.0E-06 CAACAATGCCATGGGTA 17 Sox3_HMG_DBD_dimeric_17_1 SELEX - 136859667 136859683 9.0E-06 TACCCATGGCATTGTTG 17 Sox1_HMG_DBD_dimeric_15_1 SELEX - 136859668 136859682 7.0E-06 ACCCATGGCATTGTT 15 Sox2_MA0143.1 JASPAR - 136860584 136860598 7.0E-06 CCTTTGTGGTTTAAA 15 V_E2A_Q6_01_M02088 TRANSFAC + 136857200 136857212 6.0E-06 GGACATCTGCGGC 13 V_AHR_Q5_M00778 TRANSFAC - 136857655 136857665 5.0E-06 CTTGCGTGTGT 11 V_MAX_Q6_M01830 TRANSFAC + 136857598 136857609 3.0E-06 CCGCCCACGTGC 12 V_SOX30_03_M02804 TRANSFAC + 136860625 136860640 3.0E-06 ATTGAACAATAAACCG 16 V_CBF_02_M01080 TRANSFAC - 136860584 136860599 3.0E-06 TCCTTTGTGGTTTAAA 16 V_SP1_Q6_01_M00931 TRANSFAC + 136857495 136857504 4.0E-06 GGGGCGGGGC 10 V_SP1_Q6_01_M00931 TRANSFAC + 136857979 136857988 4.0E-06 GGGGCGGGGC 10 V_TBR2_01_M01774 TRANSFAC - 136860284 136860292 6.0E-06 AGGTGTGAT 9 V_ZFP740_03_M02834 TRANSFAC + 136858031 136858046 2.0E-06 CCCGCCCCCCCACTTC 16 V_P53_DECAMER_Q2_M00761 TRANSFAC + 136858789 136858798 7.0E-06 AGGCAAGTCC 10 V_MAF_Q6_M00648 TRANSFAC - 136856397 136856412 2.0E-06 AAGAGGGAACTTGGCT 16 V_SP1_03_M02281 TRANSFAC + 136858030 136858039 7.0E-06 CCCCGCCCCC 10 V_GKLF_02_M01588 TRANSFAC + 136858630 136858641 7.0E-06 GCCACACCCTGG 12 V_TR4_Q2_M01725 TRANSFAC - 136859102 136859112 3.0E-06 CCTGACCTCTC 11 V_NERF_Q2_M00531 TRANSFAC - 136858035 136858052 1.0E-06 GGGCAGGAAGTGGGGGGG 18 V_NERF_Q2_M00531 TRANSFAC + 136859106 136859123 1.0E-06 GGTCAGGAAGGAGCTGGC 18 V_SP1_02_M01303 TRANSFAC - 136858028 136858038 8.0E-06 GGGGCGGGGGC 11 V_TCFAP2C_04_M02925 TRANSFAC + 136856106 136856119 1.0E-06 CCGCCAAAGGGCAG 14 V_PAX_Q6_M00808 TRANSFAC + 136855731 136855741 5.0E-06 CTGGAACTCAT 11 V_HNF1_C_M00206 TRANSFAC + 136860576 136860592 2.0E-06 AGTTGATTTTTAAACCA 17 V_AP1_Q6_M00174 TRANSFAC + 136856148 136856158 5.0E-06 GGTGACTCACT 11 V_WT1_Q6_01_M02036 TRANSFAC + 136858027 136858036 4.0E-06 CGCCCCCGCC 10 V_PAX5_02_M00144 TRANSFAC - 136858600 136858627 8.0E-06 AGAAGGGAGATCAGGGCGGATCAGCACC 28 V_ETS_Q4_M00771 TRANSFAC + 136858038 136858049 6.0E-06 CCCCACTTCCTG 12 V_ELF4_04_M02850 TRANSFAC - 136860574 136860590 8.0E-06 GTTTAAAAATCAACTCC 17 V_ZNF219_01_M01122 TRANSFAC + 136856910 136856921 8.0E-06 CTCCCCCATCCC 12 V_GC_01_M00255 TRANSFAC + 136857977 136857990 6.0E-06 CAGGGGCGGGGCCG 14 V_RUNX1_01_M02257 TRANSFAC - 136860587 136860597 1.0E-06 CTTTGTGGTTT 11 V_HIC1_03_M01073 TRANSFAC + 136856953 136856970 1.0E-05 GAGCAGTGCCCGCGGGCG 18 V_SP4_03_M02810 TRANSFAC - 136856660 136856676 3.0E-06 GGCACCGCCCCCTCGCC 17 V_KROX_Q6_M00982 TRANSFAC - 136858642 136858655 5.0E-06 CGCGCCCCCACCAC 14 V_AP1_Q4_M00188 TRANSFAC + 136856148 136856158 4.0E-06 GGTGACTCACT 11 V_SP1_Q6_M00196 TRANSFAC + 136857977 136857989 4.0E-06 CAGGGGCGGGGCC 13 V_SP1_Q6_M00196 TRANSFAC - 136858028 136858040 4.0E-06 GGGGGGCGGGGGC 13 V_HNF3_Q6_M00791 TRANSFAC + 136858696 136858708 8.0E-06 AAGGACAAACAGA 13 V_EGR1_Q6_M01873 TRANSFAC - 136858026 136858035 4.0E-06 GCGGGGGCGG 10 V_JUNDM2_04_M02876 TRANSFAC - 136856146 136856161 9.0E-06 GAGAGTGAGTCACCAG 16 V_TEL2_Q6_M00678 TRANSFAC + 136858040 136858049 6.0E-06 CCACTTCCTG 10 V_PNR_01_M01650 TRANSFAC - 136860579 136860592 9.0E-06 TGGTTTAAAAATCA 14 V_AP1_01_M00517 TRANSFAC - 136856147 136856159 3.0E-06 GAGTGAGTCACCA 13 V_CTCF_02_M01259 TRANSFAC - 136859688 136859707 1.0E-06 ACAGCACCACCAGGGGGCAG 20 V_OCT4_02_M01124 TRANSFAC - 136858708 136858722 6.0E-06 TTTCAGTTGCAGAAT 15 V_CTCF_01_M01200 TRANSFAC - 136859686 136859705 0.0E+00 AGCACCACCAGGGGGCAGCA 20 V_KAISO_01_M01119 TRANSFAC + 136855970 136855979 4.0E-06 CTCCTGCTAA 10 V_SP4_Q5_M01273 TRANSFAC - 136857978 136857988 8.0E-06 GCCCCGCCCCT 11 V_SP4_Q5_M01273 TRANSFAC + 136858029 136858039 5.0E-06 CCCCCGCCCCC 11 V_SOX15_03_M02799 TRANSFAC + 136860624 136860640 5.0E-06 CATTGAACAATAAACCG 17 V_CNOT3_01_M01253 TRANSFAC - 136857953 136857962 8.0E-06 GGCCGCGCCC 10 V_AP1FJ_Q2_M00172 TRANSFAC + 136856148 136856158 9.0E-06 GGTGACTCACT 11 V_ZFP161_04_M02933 TRANSFAC + 136857284 136857297 2.0E-06 GTCGCGCAGCGCCT 14 V_NRF2_Q4_M00821 TRANSFAC + 136858766 136858778 2.0E-06 CTGCTGATTCACT 13 V_NRSF_01_M00256 TRANSFAC - 136858588 136858608 2.0E-06 ATCAGCACCGGGGCCGGCTGC 21 V_REST_02_M02256 TRANSFAC - 136858588 136858608 9.0E-06 ATCAGCACCGGGGCCGGCTGC 21 V_ETS1_B_M00339 TRANSFAC - 136858036 136858050 2.0E-06 GCAGGAAGTGGGGGG 15 V_TBX5_Q5_M01044 TRANSFAC + 136860284 136860293 3.0E-06 ATCACACCTT 10 V_EGR1_06_M02744 TRANSFAC + 136858031 136858044 4.0E-06 CCCGCCCCCCCACT 14 V_SOX21_04_M02907 TRANSFAC - 136860623 136860639 4.0E-06 GGTTTATTGTTCAATGC 17 V_IRF1_Q6_01_M01881 TRANSFAC - 136858712 136858725 8.0E-06 TAATTTCAGTTGCA 14 V_SOX8_03_M02808 TRANSFAC - 136860624 136860640 6.0E-06 CGGTTTATTGTTCAATG 17 V_SOX2_01_M02246 TRANSFAC - 136860584 136860598 7.0E-06 CCTTTGTGGTTTAAA 15 V_SRF_06_M02916 TRANSFAC - 136860574 136860590 9.0E-06 GTTTAAAAATCAACTCC 17 V_VMAF_01_M00035 TRANSFAC - 136855991 136856009 2.0E-06 TAATGATTACCCAGCACTG 19 V_COREBINDINGFACTOR_Q6_M00722 TRANSFAC - 136860587 136860594 1.0E-05 TGTGGTTT 8 V_EKLF_Q5_M01874 TRANSFAC + 136858631 136858640 2.0E-06 CCACACCCTG 10 V_PPARG_02_M00515 TRANSFAC - 136855994 136856016 7.0E-06 CACTGGGTAATGATTACCCAGCA 23 V_PAX4_02_M00377 TRANSFAC + 136859435 136859445 5.0E-06 GATAAATTACC 11 V_SRY_05_M02917 TRANSFAC + 136860623 136860639 9.0E-06 GCATTGAACAATAAACC 17 V_MEF2_01_M00006 TRANSFAC - 136860575 136860590 4.0E-06 GTTTAAAAATCAACTC 16 V_SP1_Q2_01_M00933 TRANSFAC - 136857978 136857987 7.0E-06 CCCCGCCCCT 10 V_SP1_Q2_01_M00933 TRANSFAC + 136858030 136858039 4.0E-06 CCCCGCCCCC 10 V_UF1H3BETA_Q6_M01068 TRANSFAC + 136857970 136857983 2.0E-06 GGCGGGGCAGGGGC 14 V_SP1_Q4_01_M00932 TRANSFAC + 136857977 136857989 3.0E-06 CAGGGGCGGGGCC 13 V_SP1_Q4_01_M00932 TRANSFAC - 136858028 136858040 8.0E-06 GGGGGGCGGGGGC 13 V_LTF_Q6_M01692 TRANSFAC - 136857661 136857669 6.0E-06 GGCACTTGC 9 V_AP2_Q3_M00800 TRANSFAC + 136856960 136856975 5.0E-06 GCCCGCGGGCGGCGGC 16 V_NANOG_02_M01247 TRANSFAC + 136860584 136860603 1.0E-06 TTTAAACCACAAAGGAATTC 20

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.