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RGPD2 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 729857 RANBP2-like and GRIP domain containing 2 chr2 - 88124786 - 88130286 88125286 Transcription Factor Binding Sites   Download all TFBS in the RGPD2 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints FOXJ2_forkhead_DBD_dimeric_13_1 SELEX + 88124584 88124596 3.0E-06 ATAAAAATAAAAA 13 EVX2_homeodomain_DBD_monomeric_10_1 SELEX - 88124744 88124753 4.0E-06 GGTAATTAGT 10 MSX2_homeodomain_DBD_dimeric_18_1 SELEX + 88124541 88124558 1.0E-06 AATATTAAATACAAATTA 18 BARX1_homeodomain_DBD_dimeric_17_1 SELEX + 88124542 88124558 0.0E+00 ATATTAAATACAAATTA 17 EVX1_homeodomain_DBD_monomeric_10_1 SELEX + 88124744 88124753 9.0E-06 ACTAATTACC 10 FOXG1_forkhead_DBD_dimeric_17_1 SELEX + 88124593 88124609 0.0E+00 AAAAACTATAGTAAACC 17 FOXL1_forkhead_full_dimeric_13_1 SELEX + 88124585 88124597 3.0E-06 TAAAAATAAAAAA 13 ESX1_homeodomain_full_monomeric_10_1 SELEX + 88124744 88124753 7.0E-06 ACTAATTACC 10 MEF2A_MADS_DBD_dimeric_12_1 SELEX + 88124535 88124546 6.0E-06 GCTAAAAATATT 12 MEF2A_MADS_DBD_dimeric_12_1 SELEX + 88124583 88124594 5.0E-06 CATAAAAATAAA 12 IRF7_IRF_DBD_trimeric_17_1 SELEX + 88124623 88124639 2.0E-06 TGAACGAAAATCTGTTC 17 Pax4_MA0068.1 JASPAR + 88124537 88124566 1.0E-06 TAAAAATATTAAATACAAATTACCATCTAC 30 Pax4_MA0068.1 JASPAR + 88124539 88124568 4.0E-06 AAAATATTAAATACAAATTACCATCTACCC 30 Pax4_MA0068.1 JASPAR + 88124541 88124570 1.0E-06 AATATTAAATACAAATTACCATCTACCCCC 30 Pax4_MA0068.1 JASPAR + 88124583 88124612 6.0E-06 CATAAAAATAAAAAACTATAGTAAACCCTG 30 BARHL2_homeodomain_full_dimeric_16_1 SELEX - 88124543 88124558 1.0E-05 TAATTTGTATTTAATA 16 MEF2B_MADS_full_dimeric_12_1 SELEX + 88124535 88124546 8.0E-06 GCTAAAAATATT 12 Barhl1_homeodomain_DBD_dimeric_16_1 SELEX - 88124543 88124558 9.0E-06 TAATTTGTATTTAATA 16 Foxc1_forkhead_DBD_dimeric_11_1 SELEX + 88124586 88124596 8.0E-06 AAAAATAAAAA 11 MEF2A_MA0052.1 JASPAR - 88124536 88124545 8.0E-06 ATATTTTTAG 10 Hoxa2_homeodomain_DBD_monomeric_10_1 SELEX + 88124744 88124753 2.0E-06 ACTAATTACC 10 HOXD13_homeodomain_DBD_monomeric_10_1 SELEX + 88124581 88124590 3.0E-06 CCCATAAAAA 10 HNF1A_homeodomain_full_dimeric_15_1 SELEX + 88124422 88124436 1.0E-06 AGTTAAAGATTAAGA 15 HNF1A_homeodomain_full_dimeric_15_1 SELEX - 88124422 88124436 3.0E-06 TCTTAATCTTTAACT 15 HOXC11_homeodomain_full_monomeric_11_2 SELEX + 88124580 88124590 1.0E-05 GCCCATAAAAA 11 EMX1_homeodomain_DBD_monomeric_10_1 SELEX + 88124744 88124753 5.0E-06 ACTAATTACC 10 FOXC2_forkhead_DBD_dimeric_11_1 SELEX + 88124586 88124596 4.0E-06 AAAAATAAAAA 11 GBX1_homeodomain_DBD_monomeric_10_1 SELEX + 88124744 88124753 4.0E-06 ACTAATTACC 10 HOXA13_homeodomain_full_monomeric_10_1 SELEX + 88124581 88124590 3.0E-06 CCCATAAAAA 10 Msx3_homeodomain_DBD_dimeric_18_1 SELEX + 88124541 88124558 1.0E-06 AATATTAAATACAAATTA 18 HNF1B_homeodomain_full_dimeric_13_1 SELEX + 88124423 88124435 3.0E-06 GTTAAAGATTAAG 13 HNF1B_homeodomain_full_dimeric_13_1 SELEX - 88124423 88124435 7.0E-06 CTTAATCTTTAAC 13 HESX1_homeodomain_DBD_dimeric_15_1 SELEX - 88124545 88124559 4.0E-06 GTAATTTGTATTTAA 15 LHX9_homeodomain_DBD_dimeric_13_1 SELEX + 88124546 88124558 7.0E-06 TAAATACAAATTA 13 Hoxd9_homeodomain_DBD_monomeric_9_1 SELEX + 88124581 88124589 2.0E-06 CCCATAAAA 9 MEOX1_homeodomain_full_monomeric_10_1 SELEX + 88124744 88124753 2.0E-06 ACTAATTACC 10 HOXC13_homeodomain_DBD_monomeric_10_1 SELEX + 88124581 88124590 5.0E-06 CCCATAAAAA 10 CPEB1_RRM_full_monomeric_8_1 SELEX + 88124589 88124596 4.0E-06 AATAAAAA 8 HNF1B_homeodomain_full_dimeric_15_1 SELEX + 88124422 88124436 2.0E-06 AGTTAAAGATTAAGA 15 HNF1B_homeodomain_full_dimeric_15_1 SELEX - 88124422 88124436 4.0E-06 TCTTAATCTTTAACT 15 POU3F3_POU_DBD_dimeric_12_1 SELEX + 88124538 88124549 3.0E-06 AAAAATATTAAA 12 EMX2_homeodomain_DBD_monomeric_10_1 SELEX - 88124744 88124753 9.0E-06 GGTAATTAGT 10 MSX1_homeodomain_DBD_dimeric_18_1 SELEX + 88124541 88124558 1.0E-06 AATATTAAATACAAATTA 18 Hoxa11_homeodomain_DBD_monomeric_11_1 SELEX + 88124580 88124590 9.0E-06 GCCCATAAAAA 11 FOXC1_forkhead_DBD_dimeric_13_1 SELEX + 88124584 88124596 0.0E+00 ATAAAAATAAAAA 13 Foxj3_forkhead_DBD_dimeric_13_1 SELEX + 88124584 88124596 2.0E-06 ATAAAAATAAAAA 13 HOXB13_homeodomain_DBD_monomeric_10_1 SELEX + 88124581 88124590 2.0E-06 CCCATAAAAA 10 V_HOXA9_01_M01351 TRANSFAC + 88124578 88124594 0.0E+00 AAGCCCATAAAAATAAA 17 V_FOXP1_01_M00987 TRANSFAC - 88124539 88124558 0.0E+00 TAATTTGTATTTAATATTTT 20 V_FOXP1_01_M00987 TRANSFAC - 88124574 88124593 1.0E-06 TTATTTTTATGGGCTTTGGT 20 V_FOXP1_01_M00987 TRANSFAC - 88124587 88124606 2.0E-06 TTACTATAGTTTTTTATTTT 20 V_DBX1_01_M01483 TRANSFAC + 88124539 88124555 8.0E-06 AAAATATTAAATACAAA 17 V_DBX1_01_M01483 TRANSFAC + 88124542 88124558 5.0E-06 ATATTAAATACAAATTA 17 V_BCL6_01_M01183 TRANSFAC - 88124539 88124554 6.0E-06 TTGTATTTAATATTTT 16 V_BCL6_01_M01183 TRANSFAC - 88124540 88124555 3.0E-06 TTTGTATTTAATATTT 16 V_HOXA13_02_M01297 TRANSFAC + 88124588 88124596 4.0E-06 AAATAAAAA 9 V_MEF2_02_M00231 TRANSFAC + 88124529 88124550 4.0E-06 CACTCAGCTAAAAATATTAAAT 22 V_GBX2_01_M01382 TRANSFAC - 88124740 88124756 8.0E-06 GGTGGTAATTAGTCGGT 17 V_FOXO3A_Q1_M01137 TRANSFAC + 88124585 88124596 2.0E-06 TAAAAATAAAAA 12 V_HFH4_01_M00742 TRANSFAC - 88124783 88124795 4.0E-06 TATCATTTGTTTT 13 V_VAX2_01_M01327 TRANSFAC + 88124740 88124755 9.0E-06 ACCGACTAATTACCAC 16 V_PU1_Q4_M01172 TRANSFAC + 88124689 88124707 6.0E-06 TCATTCTATTTCCCCCTCT 19 V_HOXD13_01_M01404 TRANSFAC + 88124578 88124593 4.0E-06 AAGCCCATAAAAATAA 16 V_HOXA13_03_M01430 TRANSFAC + 88124577 88124592 9.0E-06 AAAGCCCATAAAAATA 16 V_HOXC13_01_M01317 TRANSFAC + 88124577 88124592 2.0E-06 AAAGCCCATAAAAATA 16 V_NKX62_Q2_M00489 TRANSFAC + 88124542 88124553 8.0E-06 ATATTAAATACA 12 V_MEF2A_Q6_M02024 TRANSFAC - 88124535 88124544 1.0E-06 TATTTTTAGC 10 V_ELF4_04_M02850 TRANSFAC + 88124584 88124600 4.0E-06 ATAAAAATAAAAAACTA 17 V_SOX7_03_M02807 TRANSFAC + 88124589 88124610 9.0E-06 AATAAAAAACTATAGTAAACCC 22 V_FOXA2_02_M02853 TRANSFAC + 88124538 88124552 7.0E-06 AAAAATATTAAATAC 15 V_FOXA2_02_M02853 TRANSFAC + 88124586 88124600 3.0E-06 AAAAATAAAAAACTA 15 V_ZFP105_03_M02827 TRANSFAC + 88124585 88124599 2.0E-06 TAAAAATAAAAAACT 15 V_ZFP105_03_M02827 TRANSFAC + 88124586 88124600 6.0E-06 AAAAATAAAAAACTA 15 V_ZFP105_03_M02827 TRANSFAC + 88124589 88124603 4.0E-06 AATAAAAAACTATAG 15 V_HOXB13_01_M01467 TRANSFAC + 88124578 88124593 1.0E-06 AAGCCCATAAAAATAA 16 V_ARID5A_03_M02736 TRANSFAC - 88124535 88124548 8.0E-06 TTAATATTTTTAGC 14 V_HNF1_Q6_M00790 TRANSFAC - 88124534 88124551 8.0E-06 TATTTAATATTTTTAGCT 18 V_NKX61_01_M00424 TRANSFAC - 88124539 88124551 4.0E-06 TATTTAATATTTT 13 V_HOXA3_02_M01337 TRANSFAC - 88124744 88124757 4.0E-06 GGGTGGTAATTAGT 14 V_AMEF2_Q6_M00403 TRANSFAC - 88124844 88124861 2.0E-06 GGCAATAAAAATGATTAA 18 V_HOXB9_01_M01426 TRANSFAC + 88124578 88124593 1.0E-06 AAGCCCATAAAAATAA 16 V_HNF1_Q6_01_M01011 TRANSFAC + 88124419 88124439 1.0E-06 TTAAGTTAAAGATTAAGAGAA 21 V_HNF1_Q6_01_M01011 TRANSFAC - 88124419 88124439 1.0E-06 TTCTCTTAATCTTTAACTTAA 21 V_MEF2_03_M00232 TRANSFAC + 88124529 88124550 5.0E-06 CACTCAGCTAAAAATATTAAAT 22 V_CDX1_01_M01373 TRANSFAC + 88124577 88124592 6.0E-06 AAAGCCCATAAAAATA 16 V_OCT1_04_M00138 TRANSFAC + 88124582 88124604 1.0E-05 CCATAAAAATAAAAAACTATAGT 23 V_PNR_01_M01650 TRANSFAC + 88124420 88124433 7.0E-06 TAAGTTAAAGATTA 14 V_MEF2_Q6_01_M00941 TRANSFAC - 88124584 88124595 8.0E-06 TTTTATTTTTAT 12 V_NCX_02_M01420 TRANSFAC + 88124538 88124554 4.0E-06 AAAAATATTAAATACAA 17 V_NCX_02_M01420 TRANSFAC - 88124539 88124555 3.0E-06 TTTGTATTTAATATTTT 17 V_NCX_02_M01420 TRANSFAC + 88124584 88124600 8.0E-06 ATAAAAATAAAAAACTA 17 V_TBP_06_M02814 TRANSFAC + 88124585 88124600 5.0E-06 TAAAAATAAAAAACTA 16 V_FOXO1_Q5_M01216 TRANSFAC + 88124782 88124790 8.0E-06 CAAAACAAA 9 V_DLX7_01_M01486 TRANSFAC + 88124489 88124505 1.0E-05 CCACCATAATTGCCCCC 17 V_MTF1_06_M02882 TRANSFAC + 88124540 88124553 1.0E-06 AAATATTAAATACA 14 V_MTF1_06_M02882 TRANSFAC + 88124585 88124598 6.0E-06 TAAAAATAAAAAAC 14 V_FAC1_01_M00456 TRANSFAC + 88124799 88124812 5.0E-06 ATACACAACACTAA 14 V_FOXL1_02_M02857 TRANSFAC + 88124778 88124793 5.0E-06 ACCTCAAAACAAATGA 16 V_OCT1_Q6_M00195 TRANSFAC + 88124545 88124559 4.0E-06 TTAAATACAAATTAC 15 V_FOXJ3_06_M02855 TRANSFAC + 88124777 88124793 1.0E-06 AACCTCAAAACAAATGA 17 V_NCX_01_M00484 TRANSFAC - 88124552 88124561 2.0E-06 TGGTAATTTG 10 V_IPF1_01_M01233 TRANSFAC + 88124743 88124752 8.0E-06 GACTAATTAC 10 V_SOX14_04_M02901 TRANSFAC - 88124746 88124762 1.0E-06 TTGTTGGGTGGTAATTA 17 V_SRF_06_M02916 TRANSFAC + 88124582 88124598 4.0E-06 CCATAAAAATAAAAAAC 17 V_SRF_06_M02916 TRANSFAC + 88124583 88124599 4.0E-06 CATAAAAATAAAAAACT 17 V_SRF_06_M02916 TRANSFAC + 88124584 88124600 1.0E-06 ATAAAAATAAAAAACTA 17 V_HNF1A_Q5_M02013 TRANSFAC + 88124422 88124432 9.0E-06 AGTTAAAGATT 11 V_HNF1A_Q5_M02013 TRANSFAC - 88124540 88124550 4.0E-06 ATTTAATATTT 11 V_PAX4_02_M00377 TRANSFAC + 88124743 88124753 2.0E-06 GACTAATTACC 11 V_PIT1_Q6_M00802 TRANSFAC + 88124839 88124856 7.0E-06 TATCCTTAATCATTTTTA 18 V_PIT1_Q6_M00802 TRANSFAC + 88124845 88124862 4.0E-06 TAATCATTTTTATTGCCA 18 V_HOXA10_01_M01464 TRANSFAC + 88124578 88124593 4.0E-06 AAGCCCATAAAAATAA 16 V_HOXD10_01_M01375 TRANSFAC + 88124578 88124594 0.0E+00 AAGCCCATAAAAATAAA 17 V_IPF1_03_M01235 TRANSFAC + 88124743 88124752 7.0E-06 GACTAATTAC 10 V_GLIS2_04_M02863 TRANSFAC + 88124583 88124596 8.0E-06 CATAAAAATAAAAA 14 V_ARID5A_04_M02840 TRANSFAC + 88124543 88124559 1.0E-06 TATTAAATACAAATTAC 17 V_PAX4_04_M00380 TRANSFAC + 88124540 88124569 0.0E+00 AAATATTAAATACAAATTACCATCTACCCC 30 V_PAX4_04_M00380 TRANSFAC + 88124541 88124570 7.0E-06 AATATTAAATACAAATTACCATCTACCCCC 30 V_IPF1_06_M01438 TRANSFAC - 88124740 88124755 9.0E-06 GTGGTAATTAGTCGGT 16

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.