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CCDC30


EntrezDescriptionChrom.StrandPromoter
(Start - Stop)
TSS
728621 coiled-coil domain containing 30 chr1 +42995559 - 43001059 43000559

Transcription Factor Binding Sites

 
Download all TFBS in the CCDC30 promoter
 
MotifSourceStrandStartStop PValueMatch
Sequence
Overlap w/
Footprints
POU4F2_POU_full_monomeric_16_1 SELEX - 42995890 42995905 1.0E-06 ATGCCTAAATAATGAG 16
POU2F1_POU_DBD_dimeric_14_1 SELEX + 42995593 42995606 3.0E-06 CATAAATAAGCAAC 14
POU3F3_POU_DBD_monomeric_12_1 SELEX - 42995894 42995905 8.0E-06 ATGCCTAAATAA 12
EMX2_homeodomain_DBD_dimeric_14_1 SELEX - 43001204 43001217 3.0E-06 AAATGAACTAATTG 14
LHX2_homeodomain_DBD_dimeric_15_1 SELEX - 43001204 43001218 2.0E-06 CAAATGAACTAATTG 15
FOXL1_forkhead_full_dimeric_13_1 SELEX + 42995593 42995605 5.0E-06 CATAAATAAGCAA 13
Tp53_p53l_DBD_dimeric_18_2 SELEX + 42998970 42998987 0.0E+00 GGCATGCCTGGGCATGTA 18
Tp53_p53l_DBD_dimeric_18_2 SELEX - 42998970 42998987 0.0E+00 TACATGCCCAGGCATGCC 18
Tp73_p53l_DBD_dimeric_18_1 SELEX + 42998970 42998987 1.0E-06 GGCATGCCTGGGCATGTA 18
Tp73_p53l_DBD_dimeric_18_1 SELEX - 42998970 42998987 1.0E-06 TACATGCCCAGGCATGCC 18
SPIB_ETS_DBD_monomeric_14_1 SELEX + 43001031 43001044 4.0E-06 AATATGAGGAACTA 14
POU4F3_POU_DBD_monomeric_16_1 SELEX - 42995890 42995905 3.0E-06 ATGCCTAAATAATGAG 16
FOXD3_forkhead_DBD_dimeric_14_1 SELEX - 42995570 42995583 8.0E-06 ATTTAATATTTTCA 14
POU6F2_POU_DBD_dimeric_16_1 SELEX - 42995598 42995613 1.0E-05 CTTATGAGTTGCTTAT 16
Foxc1_forkhead_DBD_dimeric_11_1 SELEX + 42995594 42995604 4.0E-06 ATAAATAAGCA 11
GRHL1_CP2_DBD_dimer-of-dimers_17_1 SELEX - 43001090 43001106 4.0E-06 GTCCTGTTCTACTGGTT 17
POU2F3_POU_DBD_dimeric_12_1 SELEX + 42995594 42995605 1.0E-06 ATAAATAAGCAA 12
Creb3l2_bZIP_DBD_dimeric_13_1 SELEX + 42995855 42995867 9.0E-06 TGCCATGTCATAA 13
FOXC1_forkhead_DBD_dimeric_14_1 SELEX - 42995570 42995583 9.0E-06 ATTTAATATTTTCA 14
FOXC2_forkhead_DBD_dimeric_11_1 SELEX + 42995594 42995604 5.0E-06 ATAAATAAGCA 11
TBX20_TBX_full_dimeric_16_1 SELEX + 42995611 42995626 3.0E-06 AAGTTTTAAGTTGTGA 16
POU1F1_POU_DBD_monomeric_17_1 SELEX - 42995892 42995908 6.0E-06 ACAATGCCTAAATAATG 17
TBX2_TBX_full_dimeric_18_1 SELEX + 42998944 42998961 9.0E-06 GGTGTTGATAACGTCACT 18
POU5F1P1_POU_DBD_monomeric_12_1 SELEX + 42995594 42995605 2.0E-06 ATAAATAAGCAA 12
SPI1_ETS_full_monomeric_14_1 SELEX + 43001031 43001044 6.0E-06 AATATGAGGAACTA 14
TP53_MA0106.1 JASPAR + 42998967 42998986 1.0E-06 TGTGGCATGCCTGGGCATGT 20
EMX1_homeodomain_DBD_dimeric_14_1 SELEX - 43001204 43001217 6.0E-06 AAATGAACTAATTG 14
POU3F3_POU_DBD_dimeric_12_1 SELEX + 42995594 42995605 1.0E-06 ATAAATAAGCAA 12
POU4F1_POU_DBD_monomeric_14_1 SELEX - 42995892 42995905 8.0E-06 ATGCCTAAATAATG 14
V_FOXP1_01_M00987 TRANSFAC - 42995582 42995601 2.0E-06 TTATTTATGGAATTTTGCAT 20
V_FOXP1_01_M00987 TRANSFAC + 43001017 43001036 2.0E-06 TTATCTGTATTTTTAATATG 20
V_SPI1_01_M01203 TRANSFAC + 43001031 43001047 0.0E+00 AATATGAGGAACTAAGG 17
V_FREAC7_01_M00293 TRANSFAC + 42995589 42995604 2.0E-06 ATTCCATAAATAAGCA 16
V_ZFP187_03_M02830 TRANSFAC + 43001158 43001171 5.0E-06 AGATGTGCCAATTT 14
V_ZFP187_03_M02830 TRANSFAC - 43001204 43001217 5.0E-06 AAATGAACTAATTG 14
V_IPF1_02_M01234 TRANSFAC - 42995890 42995899 5.0E-06 AAATAATGAG 10
V_CDX2_Q5_01_M01659 TRANSFAC + 42995591 42995601 0.0E+00 TCCATAAATAA 11
V_FXR_Q3_M00631 TRANSFAC - 42995874 42995887 1.0E-06 GAAGGTGAATGACT 14
V_CEBP_Q3_M00770 TRANSFAC - 43001146 43001157 8.0E-06 ATATTTTGTAAC 12
V_BCL6_01_M01183 TRANSFAC - 42995572 42995587 7.0E-06 TTGCATTTAATATTTT 16
V_BCL6_01_M01183 TRANSFAC - 42995573 42995588 8.0E-06 TTTGCATTTAATATTT 16
V_MAFB_03_M02879 TRANSFAC + 42995587 42995601 6.0E-06 AAATTCCATAAATAA 15
V_ZTA_Q2_M00711 TRANSFAC + 42995772 42995784 7.0E-06 TCATCATGGCTCA 13
V_OCT1_01_M00135 TRANSFAC + 42995576 42995594 9.0E-06 TATTAAATGCAAAATTCCA 19
V_PRX2_Q2_M02115 TRANSFAC - 43001029 43001037 4.0E-06 TCATATTAA 9
V_PU1_Q4_M01172 TRANSFAC - 42998998 42999016 9.0E-06 TCTTTCTTCTTCTTTCTTT 19
V_PU1_Q4_M01172 TRANSFAC - 42999001 42999019 1.0E-06 CTCTCTTTCTTCTTCTTTC 19
V_PU1_Q4_M01172 TRANSFAC - 43001032 43001050 2.0E-06 TAGCCTTAGTTCCTCATAT 19
V_MEF2A_Q6_M02024 TRANSFAC + 43001024 43001033 4.0E-06 TATTTTTAAT 10
V_BARBIE_01_M00238 TRANSFAC + 42998987 42999001 5.0E-06 AGTAAAAGCAGAAAG 15
V_ETS_Q4_M00771 TRANSFAC + 43001173 43001184 1.0E-05 AGCTGCTTCCTG 12
V_ELF4_04_M02850 TRANSFAC - 43001023 43001039 5.0E-06 CCTCATATTAAAAATAC 17
V_SOX7_03_M02807 TRANSFAC + 42995937 42995958 3.0E-06 AGTACAGTACAATAAGATATTT 22
V_FOXA2_02_M02853 TRANSFAC + 42995571 42995585 8.0E-06 GAAAATATTAAATGC 15
V_CEBPE_Q6_M01868 TRANSFAC - 42995642 42995655 0.0E+00 TAAGATTTCATCAT 14
V_OCT1_03_M00137 TRANSFAC - 42995888 42995900 8.0E-06 TAAATAATGAGGT 13
V_NKX61_01_M00424 TRANSFAC - 42995572 42995584 8.0E-06 CATTTAATATTTT 13
V_P53_03_M01651 TRANSFAC + 42998969 42998988 0.0E+00 TGGCATGCCTGGGCATGTAG 20
V_P53_03_M01651 TRANSFAC - 42998969 42998988 0.0E+00 CTACATGCCCAGGCATGCCA 20
V_ARID3A_02_M02839 TRANSFAC - 42995946 42995960 7.0E-06 CTAAATATCTTATTG 15
V_CDX2_Q5_M00729 TRANSFAC - 42995944 42995957 8.0E-06 AATATCTTATTGTA 14
V_HOX13_01_M00023 TRANSFAC + 42995710 42995739 8.0E-06 ACACTGTATACCCATTAGTCATGGGCATTA 30
V_OCT1_04_M00138 TRANSFAC + 42995574 42995596 4.0E-06 AATATTAAATGCAAAATTCCATA 23
V_SPIB_01_M01204 TRANSFAC + 43001031 43001047 3.0E-06 AATATGAGGAACTAAGG 17
V_ZIC3_05_M02941 TRANSFAC - 42995659 42995673 8.0E-06 CATCCCAGCAGGACA 15
V_NCX_02_M01420 TRANSFAC + 42995571 42995587 8.0E-06 GAAAATATTAAATGCAA 17
V_NCX_02_M01420 TRANSFAC - 42995572 42995588 5.0E-06 TTTGCATTTAATATTTT 17
V_AP1_01_M00517 TRANSFAC + 42995734 42995746 9.0E-06 GCATTAGTCAGCC 13
V_CREM_Q6_M01820 TRANSFAC + 42998952 42998962 6.0E-06 TAACGTCACTG 11
V_CREBP1CJUN_01_M00041 TRANSFAC - 42998952 42998959 1.0E-05 TGACGTTA 8
V_ZIC2_05_M02940 TRANSFAC - 42995659 42995673 2.0E-06 CATCCCAGCAGGACA 15
V_MTF1_06_M02882 TRANSFAC - 43001022 43001035 9.0E-06 ATATTAAAAATACA 14
V_MTF1_06_M02882 TRANSFAC - 43001024 43001037 3.0E-06 TCATATTAAAAATA 14
V_POU6F1_02_M01462 TRANSFAC - 42995885 42995901 0.0E+00 CTAAATAATGAGGTGAA 17
V_POU5F1_01_M01307 TRANSFAC + 42995581 42995590 1.0E-06 AATGCAAAAT 10
V_NKX61_02_M01469 TRANSFAC - 42995887 42995902 7.0E-06 CCTAAATAATGAGGTG 16
V_TCF7_04_M02921 TRANSFAC - 43001023 43001037 3.0E-06 TCATATTAAAAATAC 15
V_TBX15_02_M01264 TRANSFAC + 42995611 42995628 3.0E-06 AAGTTTTAAGTTGTGAAC 18
V_P53_05_M01655 TRANSFAC + 42998969 42998988 0.0E+00 TGGCATGCCTGGGCATGTAG 20
V_P53_04_M01652 TRANSFAC + 42998969 42998988 2.0E-06 TGGCATGCCTGGGCATGTAG 20
V_P53_01_M00034 TRANSFAC + 42998969 42998988 2.0E-06 TGGCATGCCTGGGCATGTAG 20
V_P53_01_M00034 TRANSFAC - 42998969 42998988 8.0E-06 CTACATGCCCAGGCATGCCA 20
V_PLZF_02_M01075 TRANSFAC - 42995943 42995971 2.0E-06 GTGGTCTCTCTCTAAATATCTTATTGTAC 29
V_P63_01_M01656 TRANSFAC + 42998969 42998988 3.0E-06 TGGCATGCCTGGGCATGTAG 20
V_P63_01_M01656 TRANSFAC - 42998969 42998988 2.0E-06 CTACATGCCCAGGCATGCCA 20
V_POU6F1_03_M01479 TRANSFAC - 42995885 42995901 0.0E+00 CTAAATAATGAGGTGAA 17
V_HNF1A_Q5_M02013 TRANSFAC - 42995573 42995583 4.0E-06 ATTTAATATTT 11
V_PIT1_Q6_M00802 TRANSFAC - 42995634 42995651 8.0E-06 ATTTCATCATGGTACTCA 18
V_HOXD10_01_M01375 TRANSFAC + 42995942 42995958 1.0E-05 AGTACAATAAGATATTT 17
V_TCF11MAFG_01_M00284 TRANSFAC - 42995849 42995870 6.0E-06 GCATTATGACATGGCATTAGAC 22
V_ZIC1_05_M02939 TRANSFAC - 42995659 42995673 1.0E-06 CATCCCAGCAGGACA 15
V_NANOG_02_M01247 TRANSFAC + 42998988 42999007 2.0E-06 GTAAAAGCAGAAAGAAAGAA 20
V_NANOG_02_M01247 TRANSFAC + 42999002 42999021 8.0E-06 AAAGAAGAAGAAAGAGAGGT 20
Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns.
Developed at the Institute for Systems Biology in the Baliga Lab.
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