Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

KRTAP19-8 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 728299 keratin associated protein 19-8 chr21 - 32410295 - 32415795 32410795 Transcription Factor Binding Sites   Download all TFBS in the KRTAP19-8 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints FOXB1_forkhead_DBD_dimeric_18_1 SELEX + 32415598 32415615 1.0E-06 AAAGTAAATATATCCTTA 18 FOXB1_forkhead_DBD_dimeric_18_1 SELEX - 32415598 32415615 6.0E-06 TAAGGATATATTTACTTT 18 Foxa2_MA0047.2 JASPAR - 32415596 32415607 3.0E-06 TATTTACTTTTC 12 FOXA1_MA0148.1 JASPAR - 32415597 32415607 6.0E-06 TATTTACTTTT 11 FOXC2_forkhead_DBD_monomeric_12_1 SELEX + 32415598 32415609 1.0E-06 AAAGTAAATATA 12 FOXC1_forkhead_DBD_monomeric_11_1 SELEX + 32415598 32415608 0.0E+00 AAAGTAAATAT 11 Gata1_MA0035.2 JASPAR + 32414060 32414070 7.0E-06 ACTGATAAGAG 11 Foxd3_MA0041.1 JASPAR - 32415599 32415610 1.0E-05 ATATATTTACTT 12 ELF5_MA0136.1 JASPAR + 32415606 32415614 9.0E-06 TATATCCTT 9 FOXB1_forkhead_DBD_monomeric_11_1 SELEX + 32415598 32415608 0.0E+00 AAAGTAAATAT 11 V_HNF3B_01_M00131 TRANSFAC - 32415598 32415612 1.0E-06 GGATATATTTACTTT 15 V_XFD1_01_M00267 TRANSFAC + 32415598 32415611 1.0E-06 AAAGTAAATATATC 14 V_GATA2_02_M00348 TRANSFAC + 32414060 32414069 5.0E-06 ACTGATAAGA 10 V_FOXA2_04_M02749 TRANSFAC + 32415596 32415612 1.0E-06 GAAAAGTAAATATATCC 17 V_FOXD3_01_M00130 TRANSFAC - 32415599 32415610 9.0E-06 ATATATTTACTT 12 V_HNF3_Q6_01_M01012 TRANSFAC - 32415595 32415612 8.0E-06 GGATATATTTACTTTTCT 18 V_CDX_Q5_M00991 TRANSFAC + 32415592 32415609 0.0E+00 TACAGAAAAGTAAATATA 18 V_NKX62_Q2_M00489 TRANSFAC + 32415598 32415609 8.0E-06 AAAGTAAATATA 12 V_FREAC3_01_M00291 TRANSFAC + 32415596 32415611 6.0E-06 GAAAAGTAAATATATC 16 V_AMEF2_Q6_M00403 TRANSFAC - 32415597 32415614 9.0E-06 AAGGATATATTTACTTTT 18 V_ARID3A_02_M02839 TRANSFAC - 32414901 32414915 5.0E-06 ACGAATATCAGATCA 15 V_HNF3A_01_M01261 TRANSFAC + 32415599 32415608 5.0E-06 AAGTAAATAT 10 V_HNF3_Q6_M00791 TRANSFAC + 32415597 32415609 2.0E-06 AAAAGTAAATATA 13 V_HNF3ALPHA_Q6_M00724 TRANSFAC - 32415597 32415607 3.0E-06 TATTTACTTTT 11 V_STAT5A_02_M00460 TRANSFAC + 32414911 32414934 6.0E-06 TTCGTGGTAAAATCATTCCTCCGA 24 V_GATA1_09_M02254 TRANSFAC + 32414060 32414070 7.0E-06 ACTGATAAGAG 11 V_SMAD4_Q6_M00733 TRANSFAC + 32415565 32415579 6.0E-06 AGGAGGCAGCCAGCT 15 V_GATA1_05_M00346 TRANSFAC + 32414060 32414069 1.0E-05 ACTGATAAGA 10 V_FOXL1_04_M02753 TRANSFAC + 32415596 32415612 2.0E-06 GAAAAGTAAATATATCC 17 V_HDX_01_M01333 TRANSFAC + 32414914 32414930 7.0E-06 GTGGTAAAATCATTCCT 17 V_TFIIA_Q6_M00707 TRANSFAC + 32415559 32415570 8.0E-06 TCTTTAAGGAGG 12 V_FOXA2_03_M02260 TRANSFAC - 32415596 32415607 3.0E-06 TATTTACTTTTC 12 V_SMAD_Q6_01_M00974 TRANSFAC + 32415581 32415591 4.0E-06 TTGGCAGACAG 11 V_HFH3_01_M00289 TRANSFAC - 32415598 32415610 6.0E-06 ATATATTTACTTT 13 V_FOXJ2_01_M00422 TRANSFAC + 32415595 32415612 8.0E-06 AGAAAAGTAAATATATCC 18 V_GATA5_03_M02756 TRANSFAC + 32414057 32414073 7.0E-06 AGCACTGATAAGAGGCC 17 V_ELF5_04_M02241 TRANSFAC + 32415606 32415614 9.0E-06 TATATCCTT 9 V_FOXK1_03_M02752 TRANSFAC + 32415596 32415612 8.0E-06 GAAAAGTAAATATATCC 17

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.