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TUB Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 7275 tubby homolog (mouse) chr11 + 8055179 - 8060679 8060179 Transcription Factor Binding Sites   Download all TFBS in the TUB promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints FOXJ2_forkhead_DBD_monomeric_8_1 SELEX - 8056841 8056848 5.0E-06 ATAAACAA 8 FOXF2_MA0030.1 JASPAR - 8056840 8056853 3.0E-06 CCATGATAAACAAG 14 RFX4_RFX_DBD_dimeric_16_1 SELEX + 8060083 8060098 0.0E+00 GGTTGCTATAGTAACC 16 RFX4_RFX_DBD_dimeric_16_1 SELEX - 8060083 8060098 0.0E+00 GGTTACTATAGCAACC 16 RFX4_RFX_DBD_dimeric_16_1 SELEX + 8060126 8060141 0.0E+00 TGTTGCCATGGAAACC 16 RFX4_RFX_DBD_dimeric_16_1 SELEX - 8060126 8060141 0.0E+00 GGTTTCCATGGCAACA 16 TFAP2B_TFAP_DBD_dimeric_11_1 SELEX + 8056928 8056938 7.0E-06 CGCCTCAGGCG 11 TFAP2B_TFAP_DBD_dimeric_11_1 SELEX + 8057032 8057042 1.0E-06 TGCCTCAGGCA 11 TFAP2B_TFAP_DBD_dimeric_11_1 SELEX - 8057032 8057042 3.0E-06 TGCCTGAGGCA 11 SOX8_HMG_full_dimeric_15_1 SELEX - 8056785 8056799 5.0E-06 CGCAAATCCAGTGTT 15 TFAP2A_TFAP_DBD_dimeric_11_1 SELEX + 8056928 8056938 5.0E-06 CGCCTCAGGCG 11 TFAP2A_TFAP_DBD_dimeric_11_1 SELEX + 8057032 8057042 1.0E-06 TGCCTCAGGCA 11 TFAP2A_TFAP_DBD_dimeric_11_1 SELEX - 8057032 8057042 4.0E-06 TGCCTGAGGCA 11 Pax4_MA0068.1 JASPAR + 8062424 8062453 4.0E-06 GAAATTTTTGAGATCCCACATCCAACCCCT 30 MEOX2_homeodomain_DBD_dimeric_14_1 SELEX - 8064243 8064256 2.0E-06 TTAGTCATCATTAG 14 IRF1_MA0050.1 JASPAR - 8056856 8056867 1.0E-05 CAAAGCAAAACT 12 Rfx3_RFX_DBD_dimeric_16_1 SELEX + 8060083 8060098 0.0E+00 GGTTGCTATAGTAACC 16 Rfx3_RFX_DBD_dimeric_16_1 SELEX - 8060083 8060098 0.0E+00 GGTTACTATAGCAACC 16 Rfx3_RFX_DBD_dimeric_16_1 SELEX + 8060126 8060141 0.0E+00 TGTTGCCATGGAAACC 16 Rfx3_RFX_DBD_dimeric_16_1 SELEX - 8060126 8060141 0.0E+00 GGTTTCCATGGCAACA 16 NFATC1_NFAT_full_dimeric_14_1 SELEX + 8060127 8060140 3.0E-06 GTTGCCATGGAAAC 14 NFATC1_NFAT_full_dimeric_14_1 SELEX - 8060127 8060140 4.0E-06 GTTTCCATGGCAAC 14 SP1_MA0079.2 JASPAR - 8062264 8062273 9.0E-06 CCCCTCCTCC 10 SOX14_HMG_DBD_dimeric_13_1 SELEX - 8056560 8056572 9.0E-06 ACAGTGCCATTGA 13 RFX2_RFX_DBD_dimeric_16_1 SELEX + 8060083 8060098 0.0E+00 GGTTGCTATAGTAACC 16 RFX2_RFX_DBD_dimeric_16_1 SELEX - 8060083 8060098 0.0E+00 GGTTACTATAGCAACC 16 RFX2_RFX_DBD_dimeric_16_1 SELEX + 8060126 8060141 0.0E+00 TGTTGCCATGGAAACC 16 RFX2_RFX_DBD_dimeric_16_1 SELEX - 8060126 8060141 0.0E+00 GGTTTCCATGGCAACA 16 RFX5_RFX_DBD_dimeric_16_3 SELEX + 8060083 8060098 0.0E+00 GGTTGCTATAGTAACC 16 RFX5_RFX_DBD_dimeric_16_3 SELEX - 8060083 8060098 0.0E+00 GGTTACTATAGCAACC 16 RFX5_RFX_DBD_dimeric_16_3 SELEX + 8060126 8060141 0.0E+00 TGTTGCCATGGAAACC 16 RFX5_RFX_DBD_dimeric_16_3 SELEX - 8060126 8060141 0.0E+00 GGTTTCCATGGCAACA 16 TFAP2C_TFAP_full_dimeric_11_1 SELEX + 8057032 8057042 1.0E-06 TGCCTCAGGCA 11 TFAP2C_TFAP_full_dimeric_11_1 SELEX - 8057032 8057042 3.0E-06 TGCCTGAGGCA 11 LHX6_homeodomain_full_dimeric_12_1 SELEX - 8057277 8057288 7.0E-06 TGCTTGCACTCA 12 REST_MA0138.2 JASPAR - 8056949 8056969 9.0E-06 GCCAGCACCAGGGTAAGCTGA 21 Foxj3_forkhead_DBD_monomeric_8_1 SELEX - 8056841 8056848 5.0E-06 ATAAACAA 8 Tcfap2a_TFAP_DBD_dimeric_11_1 SELEX + 8056928 8056938 7.0E-06 CGCCTCAGGCG 11 Tcfap2a_TFAP_DBD_dimeric_11_1 SELEX + 8057032 8057042 3.0E-06 TGCCTCAGGCA 11 Tcfap2a_TFAP_DBD_dimeric_11_1 SELEX - 8057032 8057042 6.0E-06 TGCCTGAGGCA 11 V_TCF3_01_M01594 TRANSFAC + 8056862 8056874 1.0E-06 GCTTTGATTTGCT 13 V_OBOX5_05_M03066 TRANSFAC + 8056874 8056890 6.0E-06 TGGAAGTATTAAATTTC 17 V_NF1_Q6_01_M00806 TRANSFAC - 8056905 8056921 2.0E-06 TTAAAGATTTGCCAAAA 17 V_CEBP_Q3_M00770 TRANSFAC + 8056903 8056914 8.0E-06 TTTTTTGGCAAA 12 V_HMGIY_Q3_M01010 TRANSFAC + 8056880 8056894 6.0E-06 TATTAAATTTCTTGG 15 V_BCL6_01_M01183 TRANSFAC + 8056904 8056919 1.0E-06 TTTTTGGCAAATCTTT 16 V_TCF4_Q5_01_M02033 TRANSFAC - 8056860 8056869 3.0E-06 ATCAAAGCAA 10 V_FOXJ1_03_M02750 TRANSFAC - 8064271 8064286 1.0E-05 AAGATATACAAATGGT 16 V_SP1_03_M02281 TRANSFAC - 8062264 8062273 9.0E-06 CCCCTCCTCC 10 V_SPZ1_01_M00446 TRANSFAC - 8056994 8057008 1.0E-05 GCAGGAGGTTAGGGC 15 V_NERF_Q2_M00531 TRANSFAC - 8062388 8062405 4.0E-06 GTTCAGGAAGGAGGCTGT 18 V_AFP1_Q6_M00616 TRANSFAC - 8056838 8056848 7.0E-06 ATAAACAAGAC 11 V_FOXP3_01_M01599 TRANSFAC - 8056841 8056848 5.0E-06 ATAAACAA 8 V_OBOX5_02_M01480 TRANSFAC + 8056874 8056890 6.0E-06 TGGAAGTATTAAATTTC 17 V_GFI1_01_M00250 TRANSFAC - 8056855 8056878 6.0E-06 TTCCAGCAAATCAAAGCAAAACTG 24 V_POLY_C_M00212 TRANSFAC + 8056880 8056897 2.0E-06 TATTAAATTTCTTGGCTG 18 V_POLY_C_M00212 TRANSFAC - 8056933 8056950 1.0E-06 GAATAAAGCTCTCGCCTG 18 V_IRF3_Q3_M01279 TRANSFAC + 8056854 8056866 6.0E-06 ACAGTTTTGCTTT 13 V_JUNDM2_04_M02876 TRANSFAC + 8064245 8064260 4.0E-06 AATGATGACTAACAAT 16 V_RFX_Q6_M00975 TRANSFAC + 8060279 8060287 4.0E-06 CTGTTGCCA 9 V_FREAC2_01_M00290 TRANSFAC - 8056838 8056853 2.0E-06 CCATGATAAACAAGAC 16 V_FOXL1_02_M02857 TRANSFAC - 8056856 8056871 3.0E-06 AAATCAAAGCAAAACT 16 V_GFI1B_01_M01058 TRANSFAC - 8056861 8056872 7.0E-06 CAAATCAAAGCA 12 V_FPM315_01_M01587 TRANSFAC + 8062261 8062272 4.0E-06 GGAGGAGGAGGG 12 V_NRSF_01_M00256 TRANSFAC - 8056949 8056969 2.0E-06 GCCAGCACCAGGGTAAGCTGA 21 V_REST_02_M02256 TRANSFAC - 8056949 8056969 9.0E-06 GCCAGCACCAGGGTAAGCTGA 21 V_NFAT2_02_M01749 TRANSFAC - 8060128 8060138 8.0E-06 TTCCATGGCAA 11 V_NFAT2_02_M01749 TRANSFAC + 8060129 8060139 4.0E-06 TGCCATGGAAA 11 V_SOX1_03_M02802 TRANSFAC - 8056877 8056892 9.0E-06 AAGAAATTTAATACTT 16 V_FOXO4_01_M00472 TRANSFAC - 8056838 8056848 3.0E-06 ATAAACAAGAC 11 V_AP2ALPHA_03_M01047 TRANSFAC + 8056926 8056940 9.0E-06 TGCGCCTCAGGCGAG 15 V_AP2ALPHA_03_M01047 TRANSFAC - 8056926 8056940 9.0E-06 CTCGCCTGAGGCGCA 15 V_AP2ALPHA_03_M01047 TRANSFAC + 8057030 8057044 6.0E-06 ACTGCCTCAGGCAGG 15 V_AP2ALPHA_03_M01047 TRANSFAC - 8057030 8057044 6.0E-06 CCTGCCTGAGGCAGT 15 V_TCFAP2E_03_M02822 TRANSFAC + 8056926 8056940 5.0E-06 TGCGCCTCAGGCGAG 15 V_RFX1_02_M00281 TRANSFAC + 8060082 8060099 2.0E-06 GGGTTGCTATAGTAACCC 18 V_RFX1_02_M00281 TRANSFAC - 8060082 8060099 1.0E-06 GGGTTACTATAGCAACCC 18 V_RFX1_02_M00281 TRANSFAC + 8060125 8060142 0.0E+00 GTGTTGCCATGGAAACCA 18 V_RFX1_02_M00281 TRANSFAC - 8060125 8060142 4.0E-06 TGGTTTCCATGGCAACAC 18 V_RFX1_02_M00281 TRANSFAC - 8060279 8060296 1.0E-05 TCATCACCGTGGCAACAG 18

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.