Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

PHLDA2 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 7262 pleckstrin homology-like domain, family A, member 2 chr11 - 2950150 - 2955650 2950650 Transcription Factor Binding Sites   Download all TFBS in the PHLDA2 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints NFE2_bZIP_DBD_dimeric_11_1 SELEX + 2950991 2951001 5.0E-06 GATGACTCACG 11 NFE2_bZIP_DBD_dimeric_11_1 SELEX - 2950991 2951001 9.0E-06 CGTGAGTCATC 11 THRB_nuclearreceptor_DBD_dimeric_20_1 SELEX - 2954711 2954730 8.0E-06 GTGACCTCACTCAGGGAGTT 20 PKNOX1_MEIS_DBD_dimeric_12_1 SELEX - 2952199 2952210 2.0E-06 GGACAGGTGTCA 12 SOX21_HMG_DBD_dimeric_13_2 SELEX + 2952017 2952029 6.0E-06 TGAATGGCATGCA 13 SOX21_HMG_DBD_dimeric_13_2 SELEX - 2952017 2952029 7.0E-06 TGCATGCCATTCA 13 POU3F3_POU_DBD_monomeric_12_1 SELEX - 2949517 2949528 3.0E-06 ATGAATAAATGA 12 NR4A2_nuclearreceptor_full_monomeric_11_1 SELEX + 2951883 2951893 6.0E-06 TTAAAATGTCA 11 FOXG1_forkhead_DBD_dimeric_17_1 SELEX - 2954498 2954514 1.0E-06 ATAAATATCAGTAAACC 17 SRY_HMG_DBD_dimeric_13_2 SELEX + 2952017 2952029 6.0E-06 TGAATGGCATGCA 13 SRY_HMG_DBD_dimeric_13_2 SELEX - 2952017 2952029 4.0E-06 TGCATGCCATTCA 13 POU3F2_POU_DBD_monomeric_13_1 SELEX - 2949517 2949529 3.0E-06 AATGAATAAATGA 13 POU3F4_POU_DBD_monomeric_11_1 SELEX - 2949517 2949527 9.0E-06 TGAATAAATGA 11 TFAP2B_TFAP_DBD_dimeric_11_1 SELEX - 2954832 2954842 5.0E-06 AGCCCCAGGCA 11 SOX7_HMG_full_dimeric_17_2 SELEX - 2954499 2954515 9.0E-06 GATAAATATCAGTAAAC 17 Pknox2_MEIS_DBD_dimeric_12_1 SELEX - 2952199 2952210 3.0E-06 GGACAGGTGTCA 12 SOX15_HMG_full_dimeric_15_3 SELEX - 2952016 2952030 5.0E-06 CTGCATGCCATTCAC 15 TGIF2_MEIS_DBD_dimeric_12_1 SELEX - 2952199 2952210 4.0E-06 GGACAGGTGTCA 12 TFAP2A_TFAP_DBD_dimeric_11_1 SELEX - 2954832 2954842 6.0E-06 AGCCCCAGGCA 11 IRF1_MA0050.1 JASPAR + 2951654 2951665 9.0E-06 GGAAGCGAAAGC 12 IRF1_MA0050.1 JASPAR + 2951846 2951857 5.0E-06 CAAAATGAAAAC 12 Meis3_MEIS_DBD_dimeric_12_1 SELEX - 2952199 2952210 6.0E-06 GGACAGGTGTCA 12 POU6F2_POU_DBD_dimeric_16_1 SELEX + 2955437 2955452 1.0E-06 ATTATCAGCTCCTTAA 16 POU6F2_POU_DBD_dimeric_16_1 SELEX - 2955437 2955452 2.0E-06 TTAAGGAGCTGATAAT 16 FOXO4_forkhead_DBD_putatively-multimeric_12_1 SELEX - 2949897 2949908 1.0E-06 TTTCCCCACAGG 12 Ascl2_bHLH_DBD_dimeric_10_1 SELEX + 2952033 2952042 6.0E-06 AGCAGCTGCC 10 BCL6B_C2H2_DBD_monomeric_17_1 SELEX + 2954275 2954291 7.0E-06 TGCTTTCTTGGGTTTGC 17 ZBTB49_C2H2_DBD_monomeric_17_1 SELEX - 2950947 2950963 6.0E-06 TTCCGCGGGGCCGGCCT 17 POU1F1_POU_DBD_monomeric_17_1 SELEX - 2949515 2949531 6.0E-06 TGAATGAATAAATGAAT 17 POU3F1_POU_DBD_monomeric_12_2 SELEX - 2949517 2949528 2.0E-06 ATGAATAAATGA 12 ID4_bHLH_DBD_dimeric_10_1 SELEX + 2952200 2952209 6.0E-06 GACACCTGTC 10 TGIF2LX_MEIS_full_dimeric_12_1 SELEX - 2952199 2952210 3.0E-06 GGACAGGTGTCA 12 TFAP2C_TFAP_full_dimeric_11_1 SELEX - 2954832 2954842 6.0E-06 AGCCCCAGGCA 11 GCM1_GCM_full_monomeric_11_1 SELEX + 2954692 2954702 8.0E-06 GATGCGGGCAC 11 JDP2_bZIP_full_dimeric_9_1 SELEX + 2950992 2951000 7.0E-06 ATGACTCAC 9 Myf_MA0055.1 JASPAR + 2949351 2949362 6.0E-06 AGGCAGCAGCAG 12 Myf_MA0055.1 JASPAR + 2954677 2954688 4.0E-06 CAGCAGCTGGAG 12 SPDEF_ETS_full_putative-multimer_16_1 SELEX + 2951902 2951917 8.0E-06 GCAGCAGAGCGTAAAA 16 SOX18_HMG_full_dimeric_15_3 SELEX - 2954500 2954514 4.0E-06 ATAAATATCAGTAAA 15 Meis2_MEIS_DBD_dimeric_12_1 SELEX - 2952199 2952210 3.0E-06 GGACAGGTGTCA 12 FOXO3_forkhead_full_putatively-multimeric_11_1 SELEX - 2949898 2949908 2.0E-06 TTTCCCCACAG 11 Sox3_HMG_DBD_dimeric_17_3 SELEX + 2952015 2952031 2.0E-06 TGTGAATGGCATGCAGG 17 FOXO6_forkhead_DBD_putatively-multimeric_14_1 SELEX - 2949895 2949908 2.0E-06 TTTCCCCACAGGGC 14 FOXO1_forkhead_DBD_putatively-multimeric_12_1 SELEX - 2949897 2949908 1.0E-06 TTTCCCCACAGG 12 NFE2L2_MA0150.1 JASPAR - 2951579 2951589 4.0E-06 ATGACTCAGCC 11 Tcfap2a_TFAP_DBD_dimeric_11_1 SELEX - 2954832 2954842 6.0E-06 AGCCCCAGGCA 11 TGIF1_MEIS_DBD_dimeric_12_1 SELEX - 2952199 2952210 6.0E-06 GGACAGGTGTCA 12 Sox1_HMG_DBD_dimeric_15_2 SELEX + 2952016 2952030 1.0E-05 GTGAATGGCATGCAG 15 Sox1_HMG_DBD_dimeric_15_2 SELEX - 2952016 2952030 7.0E-06 CTGCATGCCATTCAC 15 POU4F1_POU_DBD_monomeric_14_1 SELEX - 2949515 2949528 7.0E-06 ATGAATAAATGAAT 14 RREB1_MA0073.1 JASPAR - 2949296 2949315 5.0E-06 CCACAAACCACCCGCGCAGT 20 V_E2A_Q6_01_M02088 TRANSFAC + 2952157 2952169 1.0E-05 AGACACCTGCCTG 13 V_TST1_02_M01316 TRANSFAC + 2949514 2949530 7.0E-06 GATTCATTTATTCATTC 17 V_FLI1_Q6_M01208 TRANSFAC + 2949317 2949327 7.0E-06 CAGGAAGTGCT 11 V_FLI1_Q6_M01208 TRANSFAC - 2954726 2954736 6.0E-06 AAGGAAGTGAC 11 V_AHR_Q5_M00778 TRANSFAC - 2951839 2951849 4.0E-06 TTTGCGTGAGC 11 V_EVI1_05_M00082 TRANSFAC + 2949702 2949712 8.0E-06 AAACAAGATAT 11 V_GCM_Q2_M00634 TRANSFAC - 2950624 2950635 1.0E-05 ACCGCCCGCATT 12 V_BACH2_01_M00490 TRANSFAC - 2950991 2951001 0.0E+00 CGTGAGTCATC 11 V_BACH2_01_M00490 TRANSFAC - 2954323 2954333 5.0E-06 GGTGAGTCACC 11 V_ATF5_01_M01295 TRANSFAC + 2951626 2951636 2.0E-06 CCTCTTCCTTT 11 V_CHOP_01_M00249 TRANSFAC - 2950584 2950596 6.0E-06 ACATGAAATCCCC 13 V_FOXA2_04_M02749 TRANSFAC - 2951614 2951630 6.0E-06 AGAGGGTAAATAAAACC 17 V_DMRT3_01_M01148 TRANSFAC - 2951874 2951888 9.0E-06 TTTTAAATACATTTT 15 V_EVI1_04_M00081 TRANSFAC + 2949697 2949711 7.0E-06 TGCAAAAACAAGATA 15 V_ETS_B_M00340 TRANSFAC + 2951793 2951806 1.0E-05 AGCAGGAAGTCCCA 14 V_HOXA13_02_M01297 TRANSFAC - 2951615 2951623 1.0E-06 AAATAAAAC 9 V_MAFB_03_M02879 TRANSFAC - 2949673 2949687 4.0E-06 CCATTGCAAATAAAT 15 V_FOXJ2_02_M00423 TRANSFAC - 2949705 2949718 6.0E-06 GTCTTAATATCTTG 14 V_SP1_Q6_01_M00931 TRANSFAC - 2950694 2950703 4.0E-06 GGGGCGGGGC 10 V_SP1_Q6_01_M00931 TRANSFAC - 2950709 2950718 4.0E-06 GGGGCGGGGC 10 V_IRF2_Q6_M01882 TRANSFAC + 2951844 2951859 8.0E-06 CGCAAAATGAAAACGA 16 V_POU1F1_Q6_M00744 TRANSFAC - 2949519 2949528 0.0E+00 ATGAATAAAT 10 V_PLAG1_02_M01973 TRANSFAC + 2951765 2951780 7.0E-06 CCCCCTAGCTGCGCCC 16 V_AP2_Q6_01_M00915 TRANSFAC - 2951552 2951564 9.0E-06 TCGCCCCCAGGCT 13 V_AP2_Q6_01_M00915 TRANSFAC - 2955043 2955055 1.0E-05 GCCTCCCCAGGCT 13 V_SPZ1_01_M00446 TRANSFAC - 2950762 2950776 2.0E-06 TGGGGAGGGTATGGC 15 V_NERF_Q2_M00531 TRANSFAC + 2949314 2949331 3.0E-06 GGGCAGGAAGTGCTGCTG 18 V_SP1_02_M01303 TRANSFAC - 2950688 2950698 3.0E-06 GGGGCGGGGAG 11 V_SP1_02_M01303 TRANSFAC - 2950703 2950713 3.0E-06 GGGGCGGGGAG 11 V_AP4_Q6_02_M01860 TRANSFAC - 2954674 2954686 4.0E-06 CCAGCTGCTGACA 13 V_PU1_Q4_M01172 TRANSFAC - 2951395 2951413 6.0E-06 GGCTTCCTCTTCCCCTTCC 19 V_BRN2_01_M00145 TRANSFAC - 2951877 2951892 5.0E-06 GACATTTTAAATACAT 16 V_CDX_Q5_M00991 TRANSFAC + 2955436 2955453 7.0E-06 TATTATCAGCTCCTTAAA 18 V_MEF2A_Q6_M02024 TRANSFAC + 2951880 2951889 9.0E-06 TATTTAAAAT 10 V_BCL6_02_M01185 TRANSFAC + 2954275 2954288 0.0E+00 TGCTTTCTTGGGTT 14 V_AP1_Q6_M00174 TRANSFAC - 2951580 2951590 4.0E-06 GATGACTCAGC 11 V_WT1_Q6_01_M02036 TRANSFAC - 2951570 2951579 4.0E-06 CGCCCCCGCC 10 V_RPC155_01_M01798 TRANSFAC + 2949386 2949401 9.0E-06 CCCCAGGTTCAATTCC 16 V_ETS_Q4_M00771 TRANSFAC - 2949317 2949328 7.0E-06 CAGCACTTCCTG 12 V_TAL1_Q6_M00993 TRANSFAC - 2954678 2954687 3.0E-06 TCCAGCTGCT 10 V_BACH1_01_M00495 TRANSFAC - 2950989 2951003 5.0E-06 GGCGTGAGTCATCGC 15 V_ZNF219_01_M01122 TRANSFAC - 2951686 2951697 8.0E-06 CACCCCCACCCC 12 V_GC_01_M00255 TRANSFAC - 2950692 2950705 9.0E-06 GAGGGGCGGGGCGG 14 V_POU3F2_01_M00463 TRANSFAC + 2949515 2949528 0.0E+00 ATTCATTTATTCAT 14 V_POU3F2_01_M00463 TRANSFAC - 2949515 2949528 1.0E-06 ATGAATAAATGAAT 14 V_MYF_01_M01302 TRANSFAC + 2949351 2949362 6.0E-06 AGGCAGCAGCAG 12 V_MYF_01_M01302 TRANSFAC + 2954677 2954688 4.0E-06 CAGCAGCTGGAG 12 V_E12_Q6_M00693 TRANSFAC - 2952199 2952209 6.0E-06 GACAGGTGTCA 11 V_KROX_Q6_M00982 TRANSFAC - 2951686 2951699 7.0E-06 TCCACCCCCACCCC 14 V_AP1_Q6_01_M00925 TRANSFAC - 2951581 2951589 7.0E-06 ATGACTCAG 9 V_HOXA3_07_M02869 TRANSFAC + 2949704 2949717 6.0E-06 ACAAGATATTAAGA 14 V_SP1_Q6_M00196 TRANSFAC - 2950693 2950705 2.0E-06 GAGGGGCGGGGCG 13 V_MAZ_Q6_01_M02023 TRANSFAC - 2950686 2950699 8.0E-06 CGGGGCGGGGAGGG 14 V_MAZ_Q6_01_M02023 TRANSFAC - 2950701 2950714 8.0E-06 CGGGGCGGGGAGGG 14 V_EGR1_Q6_M01873 TRANSFAC + 2951571 2951580 4.0E-06 GCGGGGGCGG 10 V_IRF_Q6_M00772 TRANSFAC - 2951846 2951860 8.0E-06 CTCGTTTTCATTTTG 15 V_MEF2_03_M00232 TRANSFAC - 2955430 2955451 3.0E-06 TAAGGAGCTGATAATAGCTTCT 22 V_SREBP_Q6_M01168 TRANSFAC - 2950892 2950906 2.0E-06 CGAGTCACCCCACGG 15 V_SFPI1_04_M02896 TRANSFAC - 2950285 2950298 5.0E-06 CGATTTCCAGAACC 14 V_JUNDM2_04_M02876 TRANSFAC + 2954320 2954335 3.0E-06 GGTGGTGACTCACCCA 16 V_JUNDM2_04_M02876 TRANSFAC - 2954321 2954336 2.0E-06 CTGGGTGAGTCACCAC 16 V_YY1_Q6_02_M01035 TRANSFAC - 2951390 2951400 9.0E-06 CCTTCCATTTT 11 V_HBP1_03_M02762 TRANSFAC - 2949512 2949527 9.0E-06 TGAATAAATGAATCGT 16 V_HBP1_03_M02762 TRANSFAC - 2949516 2949531 5.0E-06 TGAATGAATAAATGAA 16 V_HBP1_03_M02762 TRANSFAC - 2949520 2949535 0.0E+00 GCTTTGAATGAATAAA 16 V_RREB1_01_M00257 TRANSFAC - 2949302 2949315 3.0E-06 CCACAAACCACCCG 14 V_AP1_C_M00199 TRANSFAC - 2951581 2951589 6.0E-06 ATGACTCAG 9 V_SMAD4_Q6_M00733 TRANSFAC + 2952150 2952164 3.0E-06 GGGAGTGAGACACCT 15 V_AP1_01_M00517 TRANSFAC - 2950990 2951002 6.0E-06 GCGTGAGTCATCG 13 V_AP1_01_M00517 TRANSFAC - 2951579 2951591 7.0E-06 CGATGACTCAGCC 13 V_AP1_01_M00517 TRANSFAC - 2954322 2954334 7.0E-06 GGGTGAGTCACCA 13 V_TBP_06_M02814 TRANSFAC - 2951876 2951891 8.0E-06 ACATTTTAAATACATT 16 V_STAT3_03_M01595 TRANSFAC + 2949470 2949485 7.0E-06 GCTGCTTGGAAAAGAG 16 V_IK3_01_M00088 TRANSFAC + 2954289 2954301 8.0E-06 TGCAGGGAACACT 13 V_CTCF_01_M01200 TRANSFAC + 2952105 2952124 4.0E-06 AGTGCCGGCAGAGGGCAGGG 20 V_AP1_Q2_01_M00924 TRANSFAC + 2955151 2955162 9.0E-06 TGACTCAGGCTT 12 V_FOXO1_Q5_M01216 TRANSFAC + 2949700 2949708 8.0E-06 AAAAACAAG 9 V_ELK1_01_M00007 TRANSFAC + 2951648 2951663 5.0E-06 TAGACAGGAAGCGAAA 16 V_MAF_Q6_01_M00983 TRANSFAC + 2951579 2951589 2.0E-06 GGCTGAGTCAT 11 V_GATA4_Q3_M00632 TRANSFAC - 2955162 2955173 7.0E-06 AGATAGAGGGCA 12 V_SP4_Q5_M01273 TRANSFAC + 2950684 2950694 7.0E-06 GCCCCTCCCCG 11 V_SP4_Q5_M01273 TRANSFAC + 2950694 2950704 8.0E-06 GCCCCGCCCCT 11 V_SP4_Q5_M01273 TRANSFAC + 2950699 2950709 7.0E-06 GCCCCTCCCCG 11 V_SP4_Q5_M01273 TRANSFAC + 2950709 2950719 2.0E-06 GCCCCGCCCCG 11 V_PTF1BETA_Q6_M00657 TRANSFAC - 2954251 2954264 1.0E-05 GGAGAAATGACCGC 14 V_AP1_Q4_01_M00926 TRANSFAC - 2950992 2950999 1.0E-05 TGAGTCAT 8 V_AP1_Q4_01_M00926 TRANSFAC + 2951582 2951589 1.0E-05 TGAGTCAT 8 V_AML2_Q3_01_M01854 TRANSFAC - 2952088 2952098 2.0E-06 CCACACCACAT 11 V_MYOD_01_M00001 TRANSFAC - 2952199 2952210 8.0E-06 GGACAGGTGTCA 12 V_ZIC2_05_M02940 TRANSFAC + 2949612 2949626 1.0E-06 CCTCCCAGCAGGAGT 15 V_POU5F1_01_M01307 TRANSFAC + 2949695 2949704 6.0E-06 GATGCAAAAA 10 V_OSR2_04_M02889 TRANSFAC - 2952024 2952039 3.0E-06 AGCTGCTACCTGCATG 16 V_CNOT3_01_M01253 TRANSFAC - 2950665 2950674 4.0E-06 GGCCGCGCCG 10 V_ZBTB3_03_M02825 TRANSFAC - 2955449 2955465 7.0E-06 ATTATCACTGCATTTAA 17 V_T3R_Q6_M00963 TRANSFAC + 2952204 2952212 7.0E-06 CCTGTCCTT 9 V_EBNA1_01_M01745 TRANSFAC + 2949315 2949330 5.0E-06 GGCAGGAAGTGCTGCT 16 V_PLAG1_01_M01778 TRANSFAC + 2951120 2951135 3.0E-06 GGGGCAGAAGGAGGGT 16 V_BDP1_01_M01796 TRANSFAC - 2949390 2949401 2.0E-06 GGAATTGAACCT 12 V_FRA1_Q5_M01267 TRANSFAC - 2950992 2950999 1.0E-05 TGAGTCAT 8 V_FRA1_Q5_M01267 TRANSFAC + 2951582 2951589 1.0E-05 TGAGTCAT 8 V_NRF2_Q4_M00821 TRANSFAC + 2951578 2951590 5.0E-06 CGGCTGAGTCATC 13 V_STAT1STAT1_Q3_M01212 TRANSFAC - 2951628 2951640 8.0E-06 CTTTAAAGGAAGA 13 V_IRF1_Q6_01_M01881 TRANSFAC - 2951845 2951858 8.0E-06 CGTTTTCATTTTGC 14 V_DMRT2_01_M01147 TRANSFAC - 2951874 2951889 6.0E-06 ATTTTAAATACATTTT 16 V_MYF6_03_M02781 TRANSFAC - 2952198 2952213 1.0E-06 CAAGGACAGGTGTCAG 16 V_VMAF_01_M00035 TRANSFAC - 2951576 2951594 1.0E-05 AAGCGATGACTCAGCCGCC 19 V_NFE2_Q6_M02104 TRANSFAC - 2951575 2951590 8.0E-06 GATGACTCAGCCGCCC 16 V_NMYC_01_M00055 TRANSFAC - 2951348 2951359 3.0E-06 TTCCACGTGTTC 12 V_EKLF_Q5_M01874 TRANSFAC - 2949483 2949492 5.0E-06 CCACACCCTC 10 V_FOXO1_01_M00473 TRANSFAC + 2949699 2949708 9.0E-06 CAAAAACAAG 10 V_SP1_Q2_01_M00933 TRANSFAC + 2950695 2950704 7.0E-06 CCCCGCCCCT 10 V_NFE2L2_01_M02263 TRANSFAC - 2951579 2951589 4.0E-06 ATGACTCAGCC 11 V_UF1H3BETA_Q6_M01068 TRANSFAC + 2951688 2951701 3.0E-06 GGTGGGGGTGGAGC 14 V_SP1_Q4_01_M00932 TRANSFAC - 2950693 2950705 4.0E-06 GAGGGGCGGGGCG 13 V_LTF_Q6_M01692 TRANSFAC + 2954761 2954769 6.0E-06 GGCACTTGC 9 V_SREBP1_Q5_M01173 TRANSFAC - 2950892 2950906 0.0E+00 CGAGTCACCCCACGG 15 V_BRF1_01_M01747 TRANSFAC + 2949390 2949402 4.0E-06 AGGTTCAATTCCT 13 V_FOXK1_03_M02752 TRANSFAC - 2951614 2951630 9.0E-06 AGAGGGTAAATAAAACC 17 V_ZIC1_05_M02939 TRANSFAC + 2949612 2949626 1.0E-06 CCTCCCAGCAGGAGT 15

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.