Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

TRPM2 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 7226 transient receptor potential cation channel, subfamily M, member 2 chr21 + 45768483 - 45773983 45773483 Transcription Factor Binding Sites   Download all TFBS in the TRPM2 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints FOXJ2_forkhead_DBD_dimeric_13_1 SELEX + 45774558 45774570 9.0E-06 GAAAACATCAAGA 13 NF-kappaB_MA0061.1 JASPAR + 45776704 45776713 4.0E-06 GGGGATTTCC 10 IRF7_IRF_DBD_dimeric_14_1 SELEX + 45773049 45773062 6.0E-06 AAGAAAAAGAAACT 14 SPIC_ETS_full_monomeric_14_1 SELEX - 45776721 45776734 4.0E-06 AGAAAGAGGAAATC 14 FOXG1_forkhead_DBD_dimeric_17_1 SELEX + 45773040 45773056 7.0E-06 AAAAACAAGAAGAAAAA 17 FOXG1_forkhead_DBD_dimeric_17_1 SELEX - 45775238 45775254 7.0E-06 ACAAACATGAATCAACA 17 ELF4_ETS_full_monomeric_12_1 SELEX + 45775410 45775421 5.0E-06 TACCAGGAAGTG 12 EWSR1-FLI1_MA0149.1 JASPAR - 45774408 45774425 3.0E-06 TGAAGGAAGGAAGCCTGC 18 NFKB1_MA0105.1 JASPAR + 45776704 45776714 1.0E-06 GGGGATTTCCC 11 Esrrb_MA0141.1 JASPAR - 45773854 45773865 7.0E-06 CCCCCAAGGTCA 12 STAT1_MA0137.2 JASPAR - 45776686 45776700 3.0E-06 CCTTTCCCATAAAAC 15 STAT1_MA0137.2 JASPAR + 45776707 45776721 4.0E-06 GATTTCCCAGAACTG 15 IRF7_IRF_DBD_trimeric_17_1 SELEX + 45773052 45773068 6.0E-06 AAAAAGAAACTTCCTTT 17 Pax4_MA0068.1 JASPAR - 45773069 45773098 1.0E-06 AAATTTTTTTAAATAGCCCTCACTGTCCAC 30 SPIB_ETS_DBD_monomeric_14_1 SELEX - 45776721 45776734 7.0E-06 AGAAAGAGGAAATC 14 NFKB2_NFAT_DBD_dimeric_13_1 SELEX + 45776703 45776715 5.0E-06 CGGGGATTTCCCA 13 NFKB2_NFAT_DBD_dimeric_13_1 SELEX - 45776703 45776715 4.0E-06 TGGGAAATCCCCG 13 POU4F3_POU_DBD_monomeric_16_1 SELEX + 45776671 45776686 9.0E-06 GTGGATTATTCATGAG 16 LEF1_HMG_DBD_monomeric_15_1 SELEX - 45775448 45775462 4.0E-06 TGGGATCAAAGAGAA 15 REL_MA0101.1 JASPAR + 45776704 45776713 1.0E-06 GGGGATTTCC 10 ELF3_ETS_full_monomeric_13_1 SELEX + 45775410 45775422 1.0E-06 TACCAGGAAGTGA 13 HOXD13_homeodomain_DBD_monomeric_10_1 SELEX - 45776686 45776695 6.0E-06 CCCATAAAAC 10 RELA_MA0107.1 JASPAR + 45776704 45776713 2.0E-06 GGGGATTTCC 10 HOXD8_homeodomain_DBD_monomeric_10_1 SELEX + 45772885 45772894 9.0E-06 AAAAATTAGC 10 FOXI1_MA0042.1 JASPAR + 45775245 45775256 9.0E-06 TCATGTTTGTGT 12 HOXA13_homeodomain_full_monomeric_10_1 SELEX - 45776686 45776695 9.0E-06 CCCATAAAAC 10 NFKB1_NFAT_DBD_dimeric_13_1 SELEX + 45776703 45776715 8.0E-06 CGGGGATTTCCCA 13 NFKB1_NFAT_DBD_dimeric_13_1 SELEX - 45776703 45776715 8.0E-06 TGGGAAATCCCCG 13 POU1F1_POU_DBD_monomeric_17_1 SELEX + 45774033 45774049 7.0E-06 TTGTTGCATAATGATTT 17 POU1F1_POU_DBD_monomeric_17_1 SELEX - 45776670 45776686 1.0E-06 CTCATGAATAATCCACC 17 Hoxd9_homeodomain_DBD_monomeric_9_1 SELEX - 45776687 45776695 2.0E-06 CCCATAAAA 9 POU3F1_POU_DBD_monomeric_12_2 SELEX - 45776672 45776683 7.0E-06 ATGAATAATCCA 12 ZNF282_C2H2_DBD_monomeric_17_1 SELEX - 45776683 45776699 1.0E-06 CTTTCCCATAAAACTCA 17 EHF_ETS_full_monomeric_12_1 SELEX + 45775410 45775421 4.0E-06 TACCAGGAAGTG 12 Myf_MA0055.1 JASPAR + 45773688 45773699 3.0E-06 CAGCAACAGCAG 12 ELF5_ETS_full_monomeric_11_1 SELEX + 45775411 45775421 4.0E-06 ACCAGGAAGTG 11 HOXC13_homeodomain_DBD_monomeric_10_1 SELEX - 45776686 45776695 1.0E-05 CCCATAAAAC 10 ELF3_ETS_DBD_monomeric_12_1 SELEX + 45775410 45775421 2.0E-06 TACCAGGAAGTG 12 ZNF410_C2H2_DBD_monomeric_17_1 SELEX - 45776684 45776700 7.0E-06 CCTTTCCCATAAAACTC 17 ELF5_MA0136.1 JASPAR + 45773059 45773067 9.0E-06 AACTTCCTT 9 HOXB13_homeodomain_DBD_monomeric_10_1 SELEX - 45776686 45776695 4.0E-06 CCCATAAAAC 10 IRF2_MA0051.1 JASPAR + 45773100 45773117 7.0E-06 GGAATATGAAAGTAGTCA 18 V_FOXP1_01_M00987 TRANSFAC - 45773040 45773059 1.0E-06 TTCTTTTTCTTCTTGTTTTT 20 V_NFKAPPAB65_01_M00052 TRANSFAC + 45776704 45776713 3.0E-06 GGGGATTTCC 10 V_ER_Q6_02_M00959 TRANSFAC + 45773792 45773802 8.0E-06 GAGGTCACCGT 11 V_SPI1_01_M01203 TRANSFAC - 45775303 45775319 7.0E-06 AAAAGGAGGAAGCGTGT 17 V_STAT5A_Q6_M01890 TRANSFAC + 45776706 45776718 5.0E-06 GGATTTCCCAGAA 13 V_NFKB_Q6_01_M00774 TRANSFAC - 45776703 45776718 2.0E-06 TTCTGGGAAATCCCCG 16 V_NFKB_Q6_01_M00774 TRANSFAC - 45776704 45776719 3.0E-06 GTTCTGGGAAATCCCC 16 V_LEF1_04_M02774 TRANSFAC + 45775447 45775463 7.0E-06 TTTCTCTTTGATCCCAG 17 V_FLI1_Q6_M01208 TRANSFAC + 45775413 45775423 2.0E-06 CAGGAAGTGAG 11 V_POU3F3_01_M03090 TRANSFAC - 45776672 45776688 9.0E-06 AACTCATGAATAATCCA 17 V_CEBP_Q3_M00770 TRANSFAC + 45773093 45773104 7.0E-06 AAATTTTGGAAT 12 V_ZFX_01_M01593 TRANSFAC - 45774072 45774087 6.0E-06 GCCCAGGCCCAGGCCC 16 V_STAT3STAT3_Q3_M01220 TRANSFAC - 45776706 45776719 1.0E-06 GTTCTGGGAAATCC 14 V_BCL6_01_M01183 TRANSFAC + 45773083 45773098 5.0E-06 CTATTTAAAAAAATTT 16 V_BCL6_01_M01183 TRANSFAC + 45773084 45773099 0.0E+00 TATTTAAAAAAATTTT 16 V_BCL6_01_M01183 TRANSFAC - 45773089 45773104 5.0E-06 ATTCCAAAATTTTTTT 16 V_BCL6_01_M01183 TRANSFAC - 45773090 45773105 9.0E-06 TATTCCAAAATTTTTT 16 V_DEAF1_02_M01002 TRANSFAC + 45776696 45776720 8.0E-06 AAAGGAGCGGGGATTTCCCAGAACT 25 V_ETS_B_M00340 TRANSFAC + 45774316 45774329 1.0E-06 AAGAGGAAATGATT 14 V_ETS_B_M00340 TRANSFAC - 45776718 45776731 3.0E-06 AAGAGGAAATCAGT 14 V_TCF4_Q5_01_M02033 TRANSFAC - 45775449 45775458 7.0E-06 ATCAAAGAGA 10 V_RELBP52_01_M01239 TRANSFAC + 45776704 45776713 1.0E-06 GGGGATTTCC 10 V_MAFB_03_M02879 TRANSFAC - 45773092 45773106 6.0E-06 ATATTCCAAAATTTT 15 V_PROP1_01_M01294 TRANSFAC - 45772882 45772892 5.0E-06 TAATTTTTTTT 11 V_MEF2_02_M00231 TRANSFAC - 45773078 45773099 6.0E-06 AAAATTTTTTTAAATAGCCCTC 22 V_OCTAMER_01_M01324 TRANSFAC - 45776672 45776688 9.0E-06 AACTCATGAATAATCCA 17 V_IRF_Q6_01_M00972 TRANSFAC + 45773051 45773061 6.0E-06 GAAAAAGAAAC 11 V_IRF2_Q6_M01882 TRANSFAC + 45773049 45773064 5.0E-06 AAGAAAAAGAAACTTC 16 V_POU1F1_Q6_M00744 TRANSFAC - 45776674 45776683 8.0E-06 ATGAATAATC 10 V_FOXO3A_Q1_M01137 TRANSFAC + 45773039 45773050 8.0E-06 AAAAAACAAGAA 12 V_CEBP_Q2_M00190 TRANSFAC + 45774033 45774046 2.0E-06 TTGTTGCATAATGA 14 V_STAT5B_01_M00459 TRANSFAC + 45776707 45776721 4.0E-06 GATTTCCCAGAACTG 15 V_STAT5B_01_M00459 TRANSFAC - 45776707 45776721 7.0E-06 CAGTTCTGGGAAATC 15 V_P50RELAP65_Q5_01_M01224 TRANSFAC + 45776705 45776716 7.0E-06 GGGATTTCCCAG 12 V_NERF_Q2_M00531 TRANSFAC + 45775410 45775427 0.0E+00 TACCAGGAAGTGAGCTTC 18 V_PU1_Q4_M01172 TRANSFAC - 45773041 45773059 1.0E-06 TTCTTTTTCTTCTTGTTTT 19 V_PU1_Q4_M01172 TRANSFAC + 45775300 45775318 9.0E-06 GCCACACGCTTCCTCCTTT 19 V_PU1_Q4_M01172 TRANSFAC + 45776715 45776733 1.0E-06 AGAACTGATTTCCTCTTTC 19 V_HOXD13_01_M01404 TRANSFAC - 45776683 45776698 2.0E-06 TTTCCCATAAAACTCA 16 V_AP4_Q6_01_M00927 TRANSFAC - 45773175 45773183 6.0E-06 ACCAGCTGC 9 V_BRN2_01_M00145 TRANSFAC + 45772875 45772890 1.0E-05 TACATACAAAAAAAAT 16 V_BRN2_01_M00145 TRANSFAC - 45776671 45776686 7.0E-06 CTCATGAATAATCCAC 16 V_TCFAP2E_04_M02926 TRANSFAC + 45772875 45772888 1.0E-05 TACATACAAAAAAA 14 V_TCFAP2E_04_M02926 TRANSFAC + 45773043 45773056 3.0E-06 AACAAGAAGAAAAA 14 V_TCFAP2E_04_M02926 TRANSFAC + 45773084 45773097 2.0E-06 TATTTAAAAAAATT 14 V_MEF2A_Q6_M02024 TRANSFAC + 45773084 45773093 4.0E-06 TATTTAAAAA 10 V_CETS1P54_02_M00074 TRANSFAC - 45773058 45773070 4.0E-06 ACAAAGGAAGTTT 13 V_BARBIE_01_M00238 TRANSFAC - 45775308 45775322 8.0E-06 AGTAAAAGGAGGAAG 15 V_NFY_C_M00209 TRANSFAC + 45773959 45773972 7.0E-06 TCTGATTGGGAAAT 14 V_RPC155_01_M01798 TRANSFAC + 45772826 45772841 0.0E+00 TCAGGAGTTTGAGACC 16 V_ETS_Q4_M00771 TRANSFAC - 45774318 45774329 5.0E-06 AATCATTTCCTC 12 V_ELF4_04_M02850 TRANSFAC + 45772878 45772894 8.0E-06 ATACAAAAAAAATTAGC 17 V_ELF4_04_M02850 TRANSFAC + 45773082 45773098 1.0E-06 GCTATTTAAAAAAATTT 17 V_TCF3_04_M02816 TRANSFAC - 45775447 45775463 9.0E-06 CTGGGATCAAAGAGAAA 17 V_MYF_01_M01302 TRANSFAC + 45773688 45773699 3.0E-06 CAGCAACAGCAG 12 V_ZFP105_03_M02827 TRANSFAC + 45772875 45772889 4.0E-06 TACATACAAAAAAAA 15 V_ZFP105_03_M02827 TRANSFAC + 45772879 45772893 0.0E+00 TACAAAAAAAATTAG 15 V_ZFP105_03_M02827 TRANSFAC + 45773036 45773050 1.0E-06 CTCAAAAAACAAGAA 15 V_ZFP105_03_M02827 TRANSFAC + 45773039 45773053 3.0E-06 AAAAAACAAGAAGAA 15 V_OCT1_03_M00137 TRANSFAC + 45774037 45774049 2.0E-06 TGCATAATGATTT 13 V_GATA3_05_M02859 TRANSFAC - 45774552 45774573 9.0E-06 TCTTCTTGATGTTTTCAGGAAT 22 V_CREL_01_M00053 TRANSFAC + 45776704 45776713 1.0E-06 GGGGATTTCC 10 V_DOBOX4_01_M01359 TRANSFAC - 45776744 45776760 7.0E-06 ATCAGAAATACCCTGTA 17 V_ZBP89_Q4_M01816 TRANSFAC - 45773232 45773241 4.0E-06 CCCTCCCCCA 10 V_CEBPB_02_M00117 TRANSFAC + 45774033 45774046 7.0E-06 TTGTTGCATAATGA 14 V_IRF_Q6_M00772 TRANSFAC - 45773051 45773065 4.0E-06 GGAAGTTTCTTTTTC 15 V_SOX_Q6_M01014 TRANSFAC + 45775450 45775462 6.0E-06 CTCTTTGATCCCA 13 V_MEF2_03_M00232 TRANSFAC - 45773078 45773099 1.0E-06 AAAATTTTTTTAAATAGCCCTC 22 V_MATH1_Q2_M01716 TRANSFAC + 45773175 45773184 3.0E-06 GCAGCTGGTG 10 V_ISRE_01_M00258 TRANSFAC - 45773049 45773063 1.0E-06 AAGTTTCTTTTTCTT 15 V_NFE4_Q5_M02105 TRANSFAC - 45773899 45773910 5.0E-06 CACCCTCCCCAG 12 V_IK2_01_M00087 TRANSFAC + 45773962 45773973 3.0E-06 GATTGGGAAATC 12 V_NFKAPPAB50_01_M00051 TRANSFAC + 45776704 45776713 6.0E-06 GGGGATTTCC 10 V_TEL2_Q6_M00678 TRANSFAC - 45775413 45775422 4.0E-06 TCACTTCCTG 10 V_TCF7_03_M02817 TRANSFAC - 45775447 45775463 7.0E-06 CTGGGATCAAAGAGAAA 17 V_MEF2_Q6_01_M00941 TRANSFAC + 45773081 45773092 3.0E-06 GGCTATTTAAAA 12 V_STAT4_Q5_M02117 TRANSFAC + 45776689 45776698 4.0E-06 TTATGGGAAA 10 V_STAT4_Q5_M02117 TRANSFAC - 45776709 45776718 7.0E-06 TTCTGGGAAA 10 V_SP3_Q3_M00665 TRANSFAC + 45773895 45773908 2.0E-06 AGAACTGGGGAGGG 14 V_TBP_06_M02814 TRANSFAC + 45773082 45773097 2.0E-06 GCTATTTAAAAAAATT 16 V_FOXO1_Q5_M01216 TRANSFAC + 45773040 45773048 8.0E-06 AAAAACAAG 9 V_MAF_Q6_01_M00983 TRANSFAC + 45775238 45775248 9.0E-06 TGTTGATTCAT 11 V_IRF7_01_M00453 TRANSFAC + 45773098 45773115 1.0E-06 TTGGAATATGAAAGTAGT 18 V_SF1_Q6_01_M01132 TRANSFAC + 45773854 45773862 7.0E-06 TGACCTTGG 9 V_PTF1BETA_Q6_M00657 TRANSFAC - 45774179 45774192 7.0E-06 GGAAAAAGGGCAGC 14 V_ELF1_Q6_M00746 TRANSFAC - 45776722 45776733 0.0E+00 GAAAGAGGAAAT 12 V_MTF1_06_M02882 TRANSFAC + 45772876 45772889 2.0E-06 ACATACAAAAAAAA 14 V_GABPBETA_Q3_M01876 TRANSFAC + 45774317 45774327 8.0E-06 AGAGGAAATGA 11 V_CAAT_C_M00200 TRANSFAC - 45772887 45772911 0.0E+00 GCCAATCACCACACCCTGCTAATTT 25 V_NANOG_01_M01123 TRANSFAC - 45774320 45774331 6.0E-06 GAAATCATTTCC 12 V_HDX_01_M01333 TRANSFAC - 45774039 45774055 3.0E-06 GATGTGAAATCATTATG 17 V_HDX_01_M01333 TRANSFAC - 45774320 45774336 2.0E-06 TCTAAGAAATCATTTCC 17 V_HDX_01_M01333 TRANSFAC - 45776715 45776731 8.0E-06 AAGAGGAAATCAGTTCT 17 V_ERR2_01_M01589 TRANSFAC - 45773851 45773862 9.0E-06 CCAAGGTCAGCA 12 V_TFIIA_Q6_M00707 TRANSFAC - 45773435 45773446 8.0E-06 TCTGAGAGGACC 12 V_GATA6_01_M00462 TRANSFAC - 45774385 45774394 9.0E-06 AAAGATTAGA 10 V_DMRT7_01_M01151 TRANSFAC + 45773274 45773287 3.0E-06 TTGTTACCATTATG 14 V_ZBTB12_03_M02824 TRANSFAC - 45773497 45773513 8.0E-06 CTGGGGTTCTAGAGACA 17 V_STAT1STAT1_Q3_M01212 TRANSFAC - 45776687 45776699 3.0E-06 CTTTCCCATAAAA 13 V_STAT1STAT1_Q3_M01212 TRANSFAC + 45776708 45776720 4.0E-06 ATTTCCCAGAACT 13 V_STAT6_02_M00500 TRANSFAC + 45776721 45776728 1.0E-05 GATTTCCT 8 V_ETS1_B_M00339 TRANSFAC + 45774317 45774331 1.0E-06 AGAGGAAATGATTTC 15 V_ZFP281_01_M01597 TRANSFAC + 45773232 45773242 9.0E-06 TGGGGGAGGGA 11 V_IRF1_Q6_01_M01881 TRANSFAC - 45773050 45773063 2.0E-06 AAGTTTCTTTTTCT 14 V_IRF1_Q6_01_M01881 TRANSFAC - 45773100 45773113 8.0E-06 TACTTTCATATTCC 14 V_NFKAPPAB_01_M00054 TRANSFAC + 45776704 45776713 4.0E-06 GGGGATTTCC 10 V_STAT5A_01_M00457 TRANSFAC + 45776707 45776721 6.0E-06 GATTTCCCAGAACTG 15 V_STAT5A_01_M00457 TRANSFAC - 45776707 45776721 2.0E-06 CAGTTCTGGGAAATC 15 V_SRF_06_M02916 TRANSFAC + 45772876 45772892 3.0E-06 ACATACAAAAAAAATTA 17 V_SRF_06_M02916 TRANSFAC + 45773083 45773099 1.0E-05 CTATTTAAAAAAATTTT 17 V_EWSR1FLI1_01_M02252 TRANSFAC - 45774408 45774425 3.0E-06 TGAAGGAAGGAAGCCTGC 18 V_FOXO1_04_M01969 TRANSFAC + 45774236 45774255 5.0E-06 TTCCACCACACCATGTTGTT 20 V_FOXO1_01_M00473 TRANSFAC + 45773039 45773048 5.0E-06 AAAAAACAAG 10 V_PAX4_02_M00377 TRANSFAC + 45772884 45772894 2.0E-06 AAAAAATTAGC 11 V_CTF1_01_M01196 TRANSFAC - 45773776 45773789 2.0E-06 TGGCCACGTGCCAA 14 V_MEF2A_05_M01301 TRANSFAC + 45773081 45773092 2.0E-06 GGCTATTTAAAA 12 V_AP2ALPHA_02_M01045 TRANSFAC - 45773813 45773827 7.0E-06 ACAGCCTCAAGCTAT 15 V_TFE_Q6_M01029 TRANSFAC - 45773412 45773419 1.0E-05 TCATGTGA 8 V_ELF5_04_M02241 TRANSFAC + 45773059 45773067 9.0E-06 AACTTCCTT 9 TLX1_NFIC_MA0119.1 JASPAR - 45773776 45773789 2.0E-06 TGGCCACGTGCCAA 14 V_STAT1_Q6_M01823 TRANSFAC + 45776689 45776698 4.0E-06 TTATGGGAAA 10 V_STAT1_Q6_M01823 TRANSFAC - 45776709 45776718 2.0E-06 TTCTGGGAAA 10 V_DEC_Q1_M00997 TRANSFAC - 45773409 45773421 6.0E-06 CCTCATGTGAAGC 13 V_CEBPG_Q6_01_M01869 TRANSFAC + 45773962 45773973 0.0E+00 GATTGGGAAATC 12 V_STAT1_05_M01260 TRANSFAC + 45776686 45776707 0.0E+00 GTTTTATGGGAAAGGAGCGGGG 22 V_SMAD1_01_M01590 TRANSFAC + 45774567 45774578 4.0E-06 AAGAAGAAAGAA 12 V_CEBPA_Q6_M01866 TRANSFAC + 45773093 45773105 7.0E-06 AAATTTTGGAATA 13

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.