Search TFs
or Genes
Construction
and Validation
Optimal
Promoter Size
Download Citation and
Contact

TNR


EntrezDescriptionChrom.StrandPromoter
(Start - Stop)
TSS
7143 tenascin R chr1 -175712252 - 175717752 175712752

Transcription Factor Binding Sites

 
Download all TFBS in the TNR promoter
 
MotifSourceStrandStartStop PValueMatch
Sequence
Overlap w/
Footprints
CTCF_MA0139.1 JASPAR - 175712892 175712910 5.0E-06 TGTCCACTAGGGGGCTGCT 19
ZNF232_C2H2_full_monomeric_19_1 SELEX + 175713623 175713641 2.0E-06 TTGTAAAATGTGGATAATG 19
Spz1_MA0111.1 JASPAR - 175712232 175712242 4.0E-06 AGGGTTACATC 11
Ar_MA0007.1 JASPAR + 175712702 175712723 4.0E-06 CTTAGCACAGTCGGTTCCTGCC 22
Tcf7_HMG_DBD_monomeric_12_1 SELEX + 175712330 175712341 9.0E-06 GAAAATCAAAGG 12
FOXI1_forkhead_full_dimeric_17_1 SELEX + 175712902 175712918 9.0E-06 TAGTGGACAGAAAAGAA 17
REST_MA0138.2 JASPAR - 175712296 175712316 0.0E+00 TTCAGCACCAAGGAGAGCTAT 21
NFIA_NFI_full_monomeric_10_1 SELEX + 175712243 175712252 1.0E-06 AGTGCCAAAT 10
V_HSF2_01_M00147 TRANSFAC - 175712408 175712417 5.0E-06 AGAATTTTCT 10
V_TCF3_01_M01594 TRANSFAC - 175712329 175712341 0.0E+00 CCTTTGATTTTCT 13
V_NRSF_Q4_M01028 TRANSFAC + 175712297 175712315 3.0E-06 TAGCTCTCCTTGGTGCTGA 19
V_CEBP_C_M00201 TRANSFAC - 175712250 175712267 1.0E-06 TGTGTTCTGCAAGGCATT 18
V_PU1_Q4_M01172 TRANSFAC + 175712817 175712835 6.0E-06 CTCTCTCTTTTCCCCTCTT 19
V_NFAT2_01_M01748 TRANSFAC - 175712874 175712882 3.0E-06 ATGGAAAAA 9
V_ELF4_04_M02850 TRANSFAC - 175712851 175712867 1.0E-06 GCTTAAAAAAATCATGC 17
V_TST1_01_M00133 TRANSFAC - 175712921 175712935 8.0E-06 GAGGATTTAGGATGC 15
V_FKLF_Q5_M01837 TRANSFAC + 175712370 175712379 5.0E-06 GGGGTGGGCG 10
V_HSF1_01_M00146 TRANSFAC - 175712408 175712417 7.0E-06 AGAATTTTCT 10
V_REST_01_M01256 TRANSFAC + 175712292 175712313 0.0E+00 TCTCATAGCTCTCCTTGGTGCT 22
V_CTCF_02_M01259 TRANSFAC - 175712894 175712913 3.0E-06 TTCTGTCCACTAGGGGGCTG 20
V_CTCF_01_M01200 TRANSFAC - 175712892 175712911 6.0E-06 CTGTCCACTAGGGGGCTGCT 20
V_ATF1_Q6_M00691 TRANSFAC - 175712726 175712736 2.0E-06 CTTTCACGTCA 11
V_TAL1_01_M01591 TRANSFAC - 175712735 175712747 2.0E-06 CTTCCTCCTCTCT 13
V_TAL1_01_M01591 TRANSFAC - 175712908 175712920 3.0E-06 TTTTCTTTTCTGT 13
V_CBF_01_M01079 TRANSFAC + 175713626 175713641 9.0E-06 TAAAATGTGGATAATG 16
V_NRSF_01_M00256 TRANSFAC - 175712296 175712316 0.0E+00 TTCAGCACCAAGGAGAGCTAT 21
V_REST_02_M02256 TRANSFAC - 175712296 175712316 0.0E+00 TTCAGCACCAAGGAGAGCTAT 21
V_PLZF_02_M01075 TRANSFAC + 175713614 175713642 5.0E-06 TTTTACTGTTTGTAAAATGTGGATAATGC 29
V_SRF_06_M02916 TRANSFAC - 175712851 175712867 3.0E-06 GCTTAAAAAAATCATGC 17
V_TCF3_05_M02920 TRANSFAC - 175712855 175712869 2.0E-06 AGGCTTAAAAAAATC 15
Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns.
Developed at the Institute for Systems Biology in the Baliga Lab.
A Django site.   Powered by PostgreSQL