Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

C1QC Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 714 complement component 1, q subcomponent, C chain chr1 + 22965117 - 22970617 22970117 Transcription Factor Binding Sites   Download all TFBS in the C1QC promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints CTCF_MA0139.1 JASPAR - 22968691 22968709 0.0E+00 TGTCCAGCAGGTGGCAGCC 19 SP8_C2H2_DBD_monomeric_12_1 SELEX - 22968655 22968666 5.0E-06 GCCCCGCCCACT 12 KLF14_C2H2_DBD_monomeric_14_1 SELEX - 22968654 22968667 4.0E-06 TGCCCCGCCCACTT 14 STAT1_MA0137.2 JASPAR + 22966063 22966077 5.0E-06 CTCTTCCTGGAATAA 15 ZNF238_C2H2_full_monomeric_13_1 SELEX - 22966076 22966088 6.0E-06 GACACAGATGTTT 13 Foxq1_MA0040.1 JASPAR - 22966073 22966083 5.0E-06 AGATGTTTATT 11 SP1_MA0079.2 JASPAR + 22965914 22965923 3.0E-06 CCCCTCCCCC 10 SP1_C2H2_DBD_monomeric_11_1 SELEX - 22968656 22968666 1.0E-05 GCCCCGCCCAC 11 Stat3_MA0144.1 JASPAR - 22966065 22966074 1.0E-06 TTCCAGGAAG 10 V_BTEB3_Q5_M01865 TRANSFAC + 22966131 22966143 9.0E-06 GAGAGGGAGGCCT 13 V_ALX4_01_M00619 TRANSFAC + 22966141 22966153 1.0E-06 CCTAAGAATAATA 13 V_HOXA13_02_M01297 TRANSFAC + 22972978 22972986 7.0E-06 ATATAAAAC 9 V_RP58_01_M00532 TRANSFAC + 22966075 22966086 3.0E-06 TAAACATCTGTG 12 V_SP1_03_M02281 TRANSFAC + 22965914 22965923 3.0E-06 CCCCTCCCCC 10 V_AR_03_M00956 TRANSFAC + 22973084 22973110 8.0E-06 TGGGTGAAGAGTCCCTGTTCTTTTGTT 27 V_FOXA2_02_M02853 TRANSFAC + 22966147 22966161 2.0E-06 AATAATAACAATCCA 15 V_E2F1_01_M01250 TRANSFAC + 22966051 22966058 1.0E-05 CGTTTCTT 8 V_E12_Q6_M00693 TRANSFAC - 22968694 22968704 8.0E-06 AGCAGGTGGCA 11 V_ZBP89_Q4_M01816 TRANSFAC + 22965915 22965924 4.0E-06 CCCTCCCCCA 10 V_FOXK1_04_M02856 TRANSFAC + 22966145 22966159 2.0E-06 AGAATAATAACAATC 15 V_MAZ_Q6_01_M02023 TRANSFAC + 22968738 22968751 1.0E-06 GAGGGAGGAGAGGA 14 V_CTCF_02_M01259 TRANSFAC - 22968693 22968712 1.0E-06 GCTTGTCCAGCAGGTGGCAG 20 V_STAT3_03_M01595 TRANSFAC - 22966061 22966076 7.0E-06 TATTCCAGGAAGAGGT 16 V_CTCF_01_M01200 TRANSFAC - 22968691 22968710 0.0E+00 TTGTCCAGCAGGTGGCAGCC 20 V_TFIII_Q6_M00706 TRANSFAC + 22966132 22966140 6.0E-06 AGAGGGAGG 9 V_TFIII_Q6_M00706 TRANSFAC + 22968737 22968745 6.0E-06 AGAGGGAGG 9 V_SP4_Q5_M01273 TRANSFAC - 22968656 22968666 9.0E-06 GCCCCGCCCAC 11 V_E2F6_01_M01252 TRANSFAC + 22966051 22966058 1.0E-05 CGTTTCTT 8 V_ZFP281_01_M01597 TRANSFAC - 22965914 22965924 1.0E-06 TGGGGGAGGGG 11 V_ZFP281_04_M02831 TRANSFAC + 22965912 22965926 0.0E+00 ACCCCCTCCCCCACC 15 V_UF1H3BETA_Q6_M01068 TRANSFAC - 22965913 22965926 1.0E-06 GGTGGGGGAGGGGG 14 V_SP1_Q4_01_M00932 TRANSFAC + 22968655 22968667 4.0E-06 AGTGGGCGGGGCA 13 V_ATATA_B_M00311 TRANSFAC + 22972996 22973005 8.0E-06 CTACATAAGC 10 V_STAT1_05_M01260 TRANSFAC - 22966056 22966077 7.0E-06 TTATTCCAGGAAGAGGTCTAAG 22

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.