Search TFs
or Genes
Construction
and Validation
Optimal
Promoter Size
Download Citation and
Contact

NKX2-1


EntrezDescriptionChrom.StrandPromoter
(Start - Stop)
TSSMotifs
7080 NK2 homeobox 1 chr14 -36988403 - 36994430 36988903 V_TITF1_Q3_M00432
V_NKX21_01_M01312

Transcription Factor Binding Sites

 
Download all TFBS in the NKX2-1 promoter
 
MotifSourceStrandStartStop PValueMatch
Sequence
Overlap w/
Footprints
LBX2_homeodomain_DBD_dimeric_13_1 SELEX - 36988726 36988738 3.0E-06 CTCAAGCCAATTA 13
CTCF_MA0139.1 JASPAR + 36989974 36989992 8.0E-06 TGGCCAGGAGGGGGCGAAT 19
CTCF_MA0139.1 JASPAR - 36994150 36994168 8.0E-06 TTCCCGCCAGAGGGCGCCC 19
Foxa2_MA0047.2 JASPAR - 36988880 36988891 3.0E-06 TGTTTACCTTGT 12
EVX2_homeodomain_DBD_monomeric_10_1 SELEX + 36988857 36988866 1.0E-06 GATAATTAGC 10
VSX1_homeodomain_full_monomeric_11_1 SELEX - 36988724 36988734 9.0E-06 AGCCAATTAAG 11
VSX1_homeodomain_full_monomeric_11_1 SELEX - 36988857 36988867 1.0E-06 AGCTAATTATC 11
SOX10_HMG_full_dimeric_14_1 SELEX - 36992792 36992805 6.0E-06 TGAATTTTCAGGCC 14
POU2F1_POU_DBD_dimeric_14_1 SELEX + 36992794 36992807 4.0E-06 CCTGAAAATTCAAA 14
VSX2_homeodomain_DBD_monomeric_8_1 SELEX - 36988858 36988865 5.0E-06 CTAATTAT 8
DLX1_homeodomain_DBD_monomeric_10_1 SELEX - 36988857 36988866 1.0E-05 GCTAATTATC 10
FOXA1_MA0148.1 JASPAR - 36988881 36988891 4.0E-06 TGTTTACCTTG 11
EVX1_homeodomain_DBD_monomeric_10_1 SELEX + 36988857 36988866 1.0E-06 GATAATTAGC 10
EVX1_homeodomain_DBD_monomeric_10_1 SELEX - 36988857 36988866 6.0E-06 GCTAATTATC 10
EBF1_EBF_full_dimeric_14_1 SELEX - 36984166 36984179 9.0E-06 ATTCCCAAGAGGAT 14
LHX2_homeodomain_DBD_dimeric_15_1 SELEX - 36988859 36988873 4.0E-06 CATGTAAGCTAATTA 15
EWSR1-FLI1_MA0149.1 JASPAR + 36989114 36989131 5.0E-06 GGTTGAGAGGAAGGAAGG 18
EWSR1-FLI1_MA0149.1 JASPAR + 36989118 36989135 2.0E-06 GAGAGGAAGGAAGGTGAA 18
ISX_homeodomain_DBD_dimeric_13_1 SELEX - 36988858 36988870 1.0E-06 GTAAGCTAATTAT 13
MSX1_homeodomain_full_monomeric_8_1 SELEX - 36988725 36988732 7.0E-06 CCAATTAA 8
MSX2_homeodomain_DBD_monomeric_8_1 SELEX - 36988725 36988732 7.0E-06 CCAATTAA 8
RFX2_RFX_DBD_dimeric_15_1 SELEX - 36989136 36989150 3.0E-06 GGTTGCAAAGCAGCA 15
RFX2_RFX_DBD_dimeric_15_1 SELEX + 36991072 36991086 8.0E-06 GGTGGCTAAGCAAGG 15
PROP1_homeodomain_full_dimeric_11_1 SELEX - 36988859 36988869 7.0E-06 TAAGCTAATTA 11
HOXD8_homeodomain_DBD_monomeric_10_1 SELEX + 36988857 36988866 4.0E-06 GATAATTAGC 10
Pou2f2_POU_DBD_dimeric_14_1 SELEX + 36992794 36992807 3.0E-06 CCTGAAAATTCAAA 14
Pou2f2_POU_DBD_dimeric_14_1 SELEX - 36992794 36992807 7.0E-06 TTTGAATTTTCAGG 14
SP1_MA0079.2 JASPAR + 36989475 36989484 7.0E-06 CCCCGCCCCC 10
PHOX2B_homeodomain_full_dimeric_11_1 SELEX - 36988859 36988869 6.0E-06 TAAGCTAATTA 11
CTCF_C2H2_full_monomeric_17_1 SELEX + 36994151 36994167 9.0E-06 GGCGCCCTCTGGCGGGA 17
MZF1_5-13_MA0057.1 JASPAR - 36989486 36989495 1.0E-06 GTAGGGGGAA 10
HESX1_homeodomain_DBD_monomeric_10_1 SELEX + 36988857 36988866 9.0E-06 GATAATTAGC 10
BSX_homeodomain_DBD_monomeric_8_1 SELEX - 36988725 36988732 7.0E-06 CCAATTAA 8
PRRX1_homeodomain_full_dimeric_11_1 SELEX - 36988859 36988869 1.0E-06 TAAGCTAATTA 11
TBX15_TBX_DBD_dimeric_19_1 SELEX - 36988664 36988682 6.0E-06 CGGCGTTAAGGTAACACCA 19
CART1_homeodomain_DBD_dimeric_13_1 SELEX - 36988858 36988870 4.0E-06 GTAAGCTAATTAT 13
Uncx_homeodomain_DBD_dimeric_13_1 SELEX - 36988858 36988870 4.0E-06 GTAAGCTAATTAT 13
Msx3_homeodomain_DBD_monomeric_8_1 SELEX - 36988725 36988732 7.0E-06 CCAATTAA 8
ZNF282_C2H2_DBD_monomeric_17_1 SELEX + 36989484 36989500 2.0E-06 CTTTCCCCCTACCGGAG 17
MEOX1_homeodomain_full_monomeric_10_1 SELEX - 36988857 36988866 4.0E-06 GCTAATTATC 10
FOXO3_forkhead_full_putatively-multimeric_11_1 SELEX + 36984348 36984358 7.0E-06 TTTCCTCACAA 11
PHOX2A_homeodomain_DBD_dimeric_11_1 SELEX - 36988859 36988869 5.0E-06 TAAGCTAATTA 11
NFIA_NFI_full_monomeric_10_1 SELEX + 36988650 36988659 5.0E-06 TTTGCCAAAT 10
Irx3_homeodomain_DBD_dimeric_12_1 SELEX + 36988824 36988835 9.0E-06 CAACAAGACAAT 12
IRF2_MA0051.1 JASPAR - 36988893 36988910 5.0E-06 GACAAGTGAAACTTAAAG 18
V_MINI20_B_M00324 TRANSFAC + 36984266 36984286 0.0E+00 TTAAGGCACCACGCCAGAGGA 21
V_KLF15_Q2_M01714 TRANSFAC + 36988801 36988814 5.0E-06 GAGGCGGGGCGTAA 14
V_MSX3_01_M01341 TRANSFAC - 36988722 36988737 9.0E-06 TCAAGCCAATTAAGGA 16
V_E2F4_Q6_M02090 TRANSFAC + 36984374 36984383 1.0E-05 GCGGGAGAGA 10
V_OSF2_Q6_M00731 TRANSFAC - 36992653 36992660 1.0E-05 ACCACAAA 8
V_ATF5_01_M01295 TRANSFAC + 36988642 36988652 4.0E-06 TTTCTCCCTTT 11
V_XFD1_01_M00267 TRANSFAC - 36992749 36992762 3.0E-06 TGAATAAATACTGT 14
V_SMAD3_Q6_01_M01888 TRANSFAC - 36989429 36989441 1.0E-06 AGGCAGACAGACT 13
V_CEBP_Q3_M00770 TRANSFAC - 36988650 36988661 1.0E-06 ATATTTGGCAAA 12
V_DLX3_01_M01400 TRANSFAC + 36988853 36988869 5.0E-06 CCGAGATAATTAGCTTA 17
V_DEAF1_02_M01002 TRANSFAC - 36988699 36988723 1.0E-05 GAGGACTCGGTCCACTCCGTTACGT 25
V_COE1_Q6_M01871 TRANSFAC + 36984168 36984181 1.0E-05 CCTCTTGGGAATCT 14
V_ZFP740_03_M02834 TRANSFAC + 36988986 36989001 1.0E-06 CCCCCACCCCCATTTT 16
V_IRF2_Q6_M01882 TRANSFAC - 36988896 36988911 8.0E-06 TGACAAGTGAAACTTA 16
V_CEBP_01_M00159 TRANSFAC - 36984296 36984308 9.0E-06 TCTTTGTTAACTT 13
V_HOXD1_01_M01448 TRANSFAC - 36988853 36988869 2.0E-06 TAAGCTAATTATCTCGG 17
V_CART1_02_M01362 TRANSFAC + 36988854 36988870 7.0E-06 CGAGATAATTAGCTTAC 17
V_HNF3_Q6_01_M01012 TRANSFAC + 36992748 36992765 9.0E-06 GACAGTATTTATTCAGCT 18
V_SP1_03_M02281 TRANSFAC + 36989475 36989484 7.0E-06 CCCCGCCCCC 10
V_HOXA2_01_M01402 TRANSFAC - 36988853 36988868 3.0E-06 AAGCTAATTATCTCGG 16
V_HOXA2_01_M01402 TRANSFAC + 36988855 36988870 1.0E-06 GAGATAATTAGCTTAC 16
V_DLX2_01_M01468 TRANSFAC + 36988855 36988870 1.0E-06 GAGATAATTAGCTTAC 16
V_SP1_02_M01303 TRANSFAC - 36989473 36989483 3.0E-06 GGGGCGGGGAG 11
V_NKX62_Q2_M00489 TRANSFAC + 36988855 36988866 7.0E-06 GAGATAATTAGC 12
V_LHX8_01_M01440 TRANSFAC - 36988853 36988869 9.0E-06 TAAGCTAATTATCTCGG 17
V_TGIF2_01_M01407 TRANSFAC - 36985847 36985862 1.0E-05 AAAACGCTGTCAAAAG 16
V_EVX2_01_M01386 TRANSFAC + 36988853 36988869 6.0E-06 CCGAGATAATTAGCTTA 17
V_ZNF219_01_M01122 TRANSFAC + 36988984 36988995 8.0E-06 CACCCCCACCCC 12
V_ZNF219_01_M01122 TRANSFAC - 36989084 36989095 1.0E-05 CTCCCCCACCCC 12
V_HOXA6_01_M01392 TRANSFAC + 36988855 36988870 3.0E-06 GAGATAATTAGCTTAC 16
V_TGIF_02_M01346 TRANSFAC + 36985846 36985862 9.0E-06 ACTTTTGACAGCGTTTT 17
V_TEF_Q6_M00672 TRANSFAC + 36988693 36988704 6.0E-06 ATGTACACGTAA 12
V_NKX61_01_M00424 TRANSFAC + 36988722 36988734 9.0E-06 TCCTTAATTGGCT 13
V_IRF2_01_M00063 TRANSFAC - 36988898 36988910 1.0E-06 GACAAGTGAAACT 13
V_SP4_03_M02810 TRANSFAC + 36989473 36989489 1.0E-06 CTCCCCGCCCCCTTTCC 17
V_HOXA1_01_M01487 TRANSFAC + 36988853 36988868 2.0E-06 CCGAGATAATTAGCTT 16
V_HOXA1_01_M01487 TRANSFAC - 36988855 36988870 1.0E-06 GTAAGCTAATTATCTC 16
V_HNF3_Q6_M00791 TRANSFAC - 36992751 36992763 6.0E-06 CTGAATAAATACT 13
V_NKX25_02_M00241 TRANSFAC + 36988724 36988731 7.0E-06 CTTAATTG 8
V_HNF3ALPHA_Q6_M00724 TRANSFAC + 36992753 36992763 1.0E-05 TATTTATTCAG 11
V_IRF_Q6_M00772 TRANSFAC + 36988895 36988909 4.0E-06 TTAAGTTTCACTTGT 15
V_LHX2_01_M01325 TRANSFAC - 36988853 36988869 6.0E-06 TAAGCTAATTATCTCGG 17
V_SOX_Q6_M01014 TRANSFAC - 36984297 36984309 1.0E-06 CTCTTTGTTAACT 13
V_GSH2_01_M01326 TRANSFAC - 36988853 36988868 9.0E-06 AAGCTAATTATCTCGG 16
V_GSH2_01_M01326 TRANSFAC + 36988855 36988870 3.0E-06 GAGATAATTAGCTTAC 16
V_OCT1_08_M01354 TRANSFAC + 36988853 36988868 9.0E-06 CCGAGATAATTAGCTT 16
V_PAX8_01_M00717 TRANSFAC - 36992740 36992754 6.0E-06 TACTGTCGAGTGAAT 15
V_ISGF3G_03_M02771 TRANSFAC - 36988896 36988910 6.0E-06 GACAAGTGAAACTTA 15
V_TGIF1_01_M03111 TRANSFAC + 36985846 36985862 9.0E-06 ACTTTTGACAGCGTTTT 17
V_CTCF_02_M01259 TRANSFAC - 36994152 36994171 1.0E-05 CCCTTCCCGCCAGAGGGCGC 20
V_CTCF_01_M01200 TRANSFAC - 36994150 36994169 5.0E-06 CTTCCCGCCAGAGGGCGCCC 20
V_SP4_Q5_M01273 TRANSFAC + 36989474 36989484 9.0E-06 TCCCCGCCCCC 11
V_HFH8_01_M00294 TRANSFAC + 36992750 36992762 9.0E-06 CAGTATTTATTCA 13
V_DLX7_01_M01486 TRANSFAC + 36988853 36988869 5.0E-06 CCGAGATAATTAGCTTA 17
V_S8_01_M00099 TRANSFAC - 36988722 36988737 9.0E-06 TCAAGCCAATTAAGGA 16
V_MINI19_B_M00323 TRANSFAC + 36984266 36984286 1.0E-06 TTAAGGCACCACGCCAGAGGA 21
V_POU6F1_02_M01462 TRANSFAC + 36988854 36988870 3.0E-06 CGAGATAATTAGCTTAC 17
V_CEBPA_01_M00116 TRANSFAC + 36985817 36985830 8.0E-06 AGATTACTAAAAAC 14
V_AREB6_02_M00413 TRANSFAC + 36988887 36988898 1.0E-05 AAACACCTTTAA 12
V_BARHL1_01_M01332 TRANSFAC - 36988722 36988737 5.0E-06 TCAAGCCAATTAAGGA 16
V_FOXO3_01_M00477 TRANSFAC - 36984295 36984308 7.0E-06 TCTTTGTTAACTTC 14
V_FOXO3_01_M00477 TRANSFAC - 36988882 36988895 8.0E-06 AAGGTGTTTACCTT 14
V_TCF4_Q5_M00671 TRANSFAC + 36994239 36994246 1.0E-05 CCTTTGAA 8
V_FOXA2_03_M02260 TRANSFAC - 36988880 36988891 3.0E-06 TGTTTACCTTGT 12
V_ZFP281_01_M01597 TRANSFAC - 36988987 36988997 1.0E-06 TGGGGGTGGGG 11
V_CHX10_01_M00437 TRANSFAC + 36988856 36988869 0.0E+00 AGATAATTAGCTTA 14
V_IRF1_Q6_01_M01881 TRANSFAC + 36988897 36988910 5.0E-06 AAGTTTCACTTGTC 14
V_ZFP281_04_M02831 TRANSFAC - 36984365 36984379 1.0E-05 TCCCGCTCCCCCACC 15
V_SRF_06_M02916 TRANSFAC - 36988632 36988648 4.0E-06 GGAGAAAAAAAAAGCAG 17
V_SRF_06_M02916 TRANSFAC - 36988633 36988649 2.0E-06 GGGAGAAAAAAAAAGCA 17
V_POU6F1_03_M01479 TRANSFAC + 36988854 36988870 2.0E-06 CGAGATAATTAGCTTAC 17
V_VAX1_01_M01397 TRANSFAC + 36988855 36988870 6.0E-06 GAGATAATTAGCTTAC 16
V_EWSR1FLI1_01_M02252 TRANSFAC + 36989114 36989131 5.0E-06 GGTTGAGAGGAAGGAAGG 18
V_EWSR1FLI1_01_M02252 TRANSFAC + 36989118 36989135 2.0E-06 GAGAGGAAGGAAGGTGAA 18
V_VDR_Q3_M00444 TRANSFAC + 36989120 36989134 4.0E-06 GAGGAAGGAAGGTGA 15
V_SMAD3_Q6_M00701 TRANSFAC + 36989433 36989441 1.0E-05 TGTCTGCCT 9
V_PLAGL1_03_M02786 TRANSFAC - 36994146 36994161 4.0E-06 CAGAGGGCGCCCCTGG 16
V_HOXB3_01_M01330 TRANSFAC - 36988853 36988869 2.0E-06 TAAGCTAATTATCTCGG 17
V_ALX3_01_M01355 TRANSFAC - 36988853 36988869 3.0E-06 TAAGCTAATTATCTCGG 17
V_IRF1_01_M00062 TRANSFAC - 36988898 36988910 8.0E-06 GACAAGTGAAACT 13
V_MOX1_01_M01443 TRANSFAC - 36988853 36988868 7.0E-06 AAGCTAATTATCTCGG 16
V_MOX1_01_M01443 TRANSFAC + 36988855 36988870 1.0E-06 GAGATAATTAGCTTAC 16
V_BSX_01_M01442 TRANSFAC + 36988855 36988870 5.0E-06 GAGATAATTAGCTTAC 16
V_BARHL2_01_M01446 TRANSFAC - 36988722 36988737 3.0E-06 TCAAGCCAATTAAGGA 16
V_SRY_05_M02917 TRANSFAC + 36988824 36988840 8.0E-06 CAACAAGACAATAGAAG 17
V_SP1_Q2_01_M00933 TRANSFAC + 36989475 36989484 4.0E-06 CCCCGCCCCC 10
V_LHX4_01_M01421 TRANSFAC - 36988853 36988869 2.0E-06 TAAGCTAATTATCTCGG 17
V_MAFK_04_M02880 TRANSFAC - 36992726 36992740 2.0E-06 TCAAAAATTGCGATA 15
V_DLX1_01_M01439 TRANSFAC + 36988853 36988866 3.0E-06 CCGAGATAATTAGC 14
V_DLX1_01_M01439 TRANSFAC - 36988857 36988870 7.0E-06 GTAAGCTAATTATC 14
V_SP1_Q4_01_M00932 TRANSFAC - 36989473 36989485 5.0E-06 AGGGGGCGGGGAG 13
V_ALX3_02_M02943 TRANSFAC - 36988853 36988869 3.0E-06 TAAGCTAATTATCTCGG 17
V_TCF3_05_M02920 TRANSFAC - 36988635 36988649 7.0E-06 GGGAGAAAAAAAAAG 15
V_TCF3_05_M02920 TRANSFAC - 36988636 36988650 3.0E-06 AGGGAGAAAAAAAAA 15
V_TCF3_05_M02920 TRANSFAC - 36988637 36988651 3.0E-06 AAGGGAGAAAAAAAA 15
V_HOXB5_01_M01319 TRANSFAC - 36988853 36988868 8.0E-06 AAGCTAATTATCTCGG 16
V_HOXB5_01_M01319 TRANSFAC + 36988855 36988870 3.0E-06 GAGATAATTAGCTTAC 16
V_RFX1_02_M00281 TRANSFAC + 36988812 36988829 1.0E-06 TAAGCGCTAAAGCAACAA 18
V_HOXA4_Q2_M00640 TRANSFAC + 36988858 36988865 5.0E-06 ATAATTAG 8
V_HOX13_02_M01452 TRANSFAC - 36988853 36988868 2.0E-06 AAGCTAATTATCTCGG 16
V_HOX13_02_M01452 TRANSFAC + 36988855 36988870 5.0E-06 GAGATAATTAGCTTAC 16
V_NANOG_02_M01247 TRANSFAC + 36988823 36988842 3.0E-06 GCAACAAGACAATAGAAGCC 20
V_IPF1_06_M01438 TRANSFAC - 36988853 36988868 5.0E-06 AAGCTAATTATCTCGG 16
V_IPF1_06_M01438 TRANSFAC + 36988855 36988870 4.0E-06 GAGATAATTAGCTTAC 16
Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns.
Developed at the Institute for Systems Biology in the Baliga Lab.
A Django site.   Powered by PostgreSQL