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TCOF1 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 6949 Treacher Collins-Franceschetti syndrome 1 chr5 + 149732201 - 149737701 149737201 Transcription Factor Binding Sites   Download all TFBS in the TCOF1 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints FOXB1_forkhead_DBD_dimeric_18_1 SELEX + 149741075 149741092 0.0E+00 TATGCAAATATTGTCACA 18 FOXB1_forkhead_DBD_dimeric_18_1 SELEX - 149741075 149741092 1.0E-06 TGTGACAATATTTGCATA 18 POU3F3_POU_DBD_monomeric_12_1 SELEX - 149737947 149737958 8.0E-06 TTGAATTAATCA 12 FOXC2_forkhead_DBD_monomeric_12_1 SELEX + 149741075 149741086 9.0E-06 TATGCAAATATT 12 ELF4_ETS_full_monomeric_12_1 SELEX + 149737209 149737220 7.0E-06 GAGCCGGAAGTG 12 POU5F1P1_POU_DBD_monomeric_9_1 SELEX + 149741075 149741083 2.0E-06 TATGCAAAT 9 FOXC1_forkhead_DBD_monomeric_11_1 SELEX + 149741075 149741085 6.0E-06 TATGCAAATAT 11 POU2F3_POU_DBD_monomeric_9_1 SELEX + 149741075 149741083 2.0E-06 TATGCAAAT 9 EWSR1-FLI1_MA0149.1 JASPAR - 149741103 149741120 4.0E-06 GGAAAGAAGGAACCATGT 18 ZNF232_C2H2_full_monomeric_19_1 SELEX + 149736948 149736966 3.0E-06 GAGTAAAACGCAGACCCAG 19 POU1F1_POU_DBD_monomeric_14_1 SELEX + 149741073 149741086 7.0E-06 AGTATGCAAATATT 14 POU2F2_POU_DBD_monomeric_11_1 SELEX + 149741074 149741084 2.0E-06 GTATGCAAATA 11 POU3F4_POU_DBD_monomeric_9_1 SELEX + 149741075 149741083 2.0E-06 TATGCAAAT 9 IRF7_IRF_DBD_trimeric_17_1 SELEX + 149738599 149738615 8.0E-06 AAAAAAAAATTTTTTTT 17 Pou2f2_POU_DBD_monomeric_9_1 SELEX + 149741075 149741083 2.0E-06 TATGCAAAT 9 FOXD2_forkhead_DBD_dimeric_14_1 SELEX + 149741077 149741090 7.0E-06 TGCAAATATTGTCA 14 OTX1_homeodomain_DBD_monomeric_8_1 SELEX + 149737962 149737969 1.0E-05 TTAATCCG 8 ESRRG_nuclearreceptor_full_dimeric_18_1 SELEX - 149732492 149732509 5.0E-06 CAGGGCACGGCGAGGTCA 18 POU3F3_POU_DBD_monomeric_13_1 SELEX + 149741073 149741085 1.0E-06 AGTATGCAAATAT 13 FOXD3_forkhead_DBD_dimeric_14_1 SELEX + 149741077 149741090 4.0E-06 TGCAAATATTGTCA 14 ELF3_ETS_full_monomeric_13_1 SELEX + 149737209 149737221 6.0E-06 GAGCCGGAAGTGT 13 Rarb_nuclearreceptor_DBD_dimeric_17_1 SELEX - 149732492 149732508 5.0E-06 AGGGCACGGCGAGGTCA 17 ESR1_MA0112.2 JASPAR - 149738419 149738438 7.0E-06 TGACCAGGGCAATCTGCCAT 20 OTX2_homeodomain_DBD_monomeric_8_1 SELEX - 149737017 149737024 7.0E-06 TTAATCCT 8 HNF4A_nuclearreceptor_full_dimeric_16_1 SELEX - 149737661 149737676 9.0E-06 AATTACAAAGTTCGGC 16 FOXC1_forkhead_DBD_dimeric_14_1 SELEX + 149741077 149741090 1.0E-06 TGCAAATATTGTCA 14 FOXC1_forkhead_DBD_dimeric_14_1 SELEX - 149741077 149741090 1.0E-06 TGACAATATTTGCA 14 RARA_nuclearreceptor_full_dimeric_17_1 SELEX - 149732492 149732508 2.0E-06 AGGGCACGGCGAGGTCA 17 SPDEF_ETS_full_putative-multimer_15_1 SELEX - 149737962 149737976 8.0E-06 TGAGTACCGGATTAA 15 Lhx3_MA0135.1 JASPAR + 149737947 149737959 9.0E-06 TGATTAATTCAAC 13 HNF4A_nuclearreceptor_full_dimeric_15_1 SELEX - 149737662 149737676 7.0E-06 AATTACAAAGTTCGG 15 RFX4_RFX_DBD_dimeric_15_1 SELEX - 149741016 149741030 8.0E-06 GTTTGCTGAGCAACT 15 POU3F1_POU_DBD_monomeric_12_1 SELEX + 149741074 149741085 4.0E-06 GTATGCAAATAT 12 PITX1_homeodomain_full_monomeric_9_1 SELEX - 149737017 149737025 2.0E-06 TTTAATCCT 9 FOXC2_forkhead_DBD_dimeric_14_1 SELEX + 149741077 149741090 1.0E-06 TGCAAATATTGTCA 14 FOXC2_forkhead_DBD_dimeric_14_1 SELEX - 149741077 149741090 2.0E-06 TGACAATATTTGCA 14 POU3F1_POU_DBD_monomeric_12_2 SELEX - 149737947 149737958 6.0E-06 TTGAATTAATCA 12 EHF_ETS_full_monomeric_12_1 SELEX + 149737209 149737220 1.0E-05 GAGCCGGAAGTG 12 DUXA_homeodomain_DBD_dimeric_13_1 SELEX - 149737946 149737958 1.0E-06 TTGAATTAATCAA 13 POU2F1_POU_DBD_monomeric_12_1 SELEX + 149741073 149741084 1.0E-06 AGTATGCAAATA 12 CREB3L1_bZIP_full_dimeric_12_1 SELEX + 149737738 149737749 7.0E-06 CGCCACGTGGCT 12 CREB3L1_bZIP_full_dimeric_12_1 SELEX - 149737738 149737749 6.0E-06 AGCCACGTGGCG 12 GABPA_ETS_full_monomeric_10_1 SELEX + 149737211 149737220 9.0E-06 GCCGGAAGTG 10 RORA_nuclearreceptor_DBD_dimeric_20_1 SELEX - 149732492 149732511 4.0E-06 TGCAGGGCACGGCGAGGTCA 20 ELF3_ETS_DBD_monomeric_12_1 SELEX + 149737209 149737220 7.0E-06 GAGCCGGAAGTG 12 ETV6_ETS_full_dimeric_15_1 SELEX + 149737206 149737220 5.0E-06 GAGGAGCCGGAAGTG 15 POU3F2_POU_DBD_monomeric_12_1 SELEX + 149741074 149741085 5.0E-06 GTATGCAAATAT 12 FOXB1_forkhead_DBD_monomeric_11_1 SELEX + 149741075 149741085 6.0E-06 TATGCAAATAT 11 RXR_RAR_DR5_MA0159.1 JASPAR - 149732492 149732508 7.0E-06 AGGGCACGGCGAGGTCA 17 V_OBOX6_01_M01445 TRANSFAC - 149737960 149737974 8.0E-06 AGTACCGGATTAACA 15 V_HNF3B_01_M00131 TRANSFAC - 149741075 149741089 1.0E-05 GACAATATTTGCATA 15 V_TST1_02_M01316 TRANSFAC - 149737943 149737959 2.0E-06 GTTGAATTAATCAAGTA 17 V_DBX1_01_M01483 TRANSFAC - 149737936 149737952 8.0E-06 TAATCAAGTAAGAAATG 17 V_USF_Q6_M00187 TRANSFAC + 149737739 149737748 9.0E-06 GCCACGTGGC 10 V_USF_Q6_M00187 TRANSFAC - 149737739 149737748 9.0E-06 GCCACGTGGC 10 V_TCF3_01_M01594 TRANSFAC - 149738048 149738060 4.0E-06 TCTTTGATTTGTC 13 V_LEF1_04_M02774 TRANSFAC - 149738048 149738064 7.0E-06 TGATTCTTTGATTTGTC 17 V_POU3F3_01_M03090 TRANSFAC - 149741070 149741086 3.0E-06 AATATTTGCATACTAAG 17 V_DUXL_01_M01390 TRANSFAC - 149737941 149737957 6.0E-06 TGAATTAATCAAGTAAG 17 V_MYB_03_M02883 TRANSFAC - 149741009 149741024 9.0E-06 TGAGCAACTGACAAGC 16 V_ESR1_01_M02261 TRANSFAC - 149738419 149738438 7.0E-06 TGACCAGGGCAATCTGCCAT 20 V_HMGIY_Q3_M01010 TRANSFAC + 149732601 149732615 7.0E-06 AAGGCATTTTCTCTT 15 V_FOXD3_01_M00130 TRANSFAC - 149738599 149738610 9.0E-06 AAATTTTTTTTT 12 V_BCL6_01_M01183 TRANSFAC - 149738602 149738617 3.0E-06 TTAAAAAAAATTTTTT 16 V_COE1_Q6_M01871 TRANSFAC - 149737595 149737608 7.0E-06 GCCCAGGGGAACTG 14 V_SPIB_02_M02041 TRANSFAC - 149737338 149737347 2.0E-06 AGGGGAAGTA 10 V_GABP_B_M00341 TRANSFAC + 149737211 149737222 7.0E-06 GCCGGAAGTGTG 12 V_SP1_Q6_01_M00931 TRANSFAC + 149737139 149737148 4.0E-06 GGGGCGGGGC 10 V_OCT1_Q5_01_M00930 TRANSFAC - 149741075 149741085 2.0E-06 ATATTTGCATA 11 V_OCTAMER_01_M01324 TRANSFAC - 149741070 149741086 3.0E-06 AATATTTGCATACTAAG 17 V_MEIS1AHOXA9_01_M00420 TRANSFAC - 149737951 149737964 5.0E-06 TAACAGTTGAATTA 14 V_OTX_Q1_M01117 TRANSFAC + 149737948 149737955 5.0E-06 GATTAATT 8 V_OCT1_01_M00135 TRANSFAC + 149741070 149741088 0.0E+00 CTTAGTATGCAAATATTGT 19 V_POU2F3_01_M01476 TRANSFAC + 149741072 149741087 0.0E+00 TAGTATGCAAATATTG 16 V_GATA1_03_M00127 TRANSFAC + 149736924 149736937 1.0E-05 ATCCAGATTAGGGA 14 V_OCT_C_M00210 TRANSFAC - 149741074 149741086 2.0E-06 AATATTTGCATAC 13 V_LHX3_01_M01471 TRANSFAC - 149737941 149737957 3.0E-06 TGAATTAATCAAGTAAG 17 V_LHX3A_01_M00510 TRANSFAC - 149737946 149737955 4.0E-06 AATTAATCAA 10 V_TCFAP2E_04_M02926 TRANSFAC + 149738394 149738407 6.0E-06 TGCCTCAAAAAAAA 14 V_TCFAP2E_04_M02926 TRANSFAC + 149738395 149738408 5.0E-06 GCCTCAAAAAAAAA 14 V_TCFAP2E_04_M02926 TRANSFAC + 149738594 149738607 2.0E-06 GTCTCAAAAAAAAA 14 V_TCFAP2E_04_M02926 TRANSFAC + 149738596 149738609 1.0E-05 CTCAAAAAAAAATT 14 V_TCFAP2E_04_M02926 TRANSFAC - 149738607 149738620 1.0E-06 GACTTAAAAAAAAT 14 V_PAX6_02_M01391 TRANSFAC + 149737943 149737958 6.0E-06 TACTTGATTAATTCAA 16 V_CDX_Q5_M00991 TRANSFAC - 149737946 149737963 3.0E-06 AACAGTTGAATTAATCAA 18 V_MEF2A_Q6_M02024 TRANSFAC + 149737715 149737724 6.0E-06 TATTTTAAGT 10 V_RPC155_01_M01798 TRANSFAC - 149737914 149737929 3.0E-06 CCACGAGTTCGAGTAC 16 V_LHX61_01_M01314 TRANSFAC + 149737941 149737957 9.0E-06 CTTACTTGATTAATTCA 17 V_SPIC_01_M02042 TRANSFAC - 149737338 149737347 5.0E-06 AGGGGAAGTA 10 V_ELF4_04_M02850 TRANSFAC + 149738395 149738411 5.0E-06 GCCTCAAAAAAAAAAGA 17 V_ELF4_04_M02850 TRANSFAC + 149738396 149738412 8.0E-06 CCTCAAAAAAAAAAGAG 17 V_ELF4_04_M02850 TRANSFAC + 149738593 149738609 8.0E-06 TGTCTCAAAAAAAAATT 17 V_ELF4_04_M02850 TRANSFAC + 149738594 149738610 0.0E+00 GTCTCAAAAAAAAATTT 17 V_ELF4_04_M02850 TRANSFAC + 149738595 149738611 0.0E+00 TCTCAAAAAAAAATTTT 17 V_ELF4_04_M02850 TRANSFAC + 149738596 149738612 8.0E-06 CTCAAAAAAAAATTTTT 17 V_ELF4_04_M02850 TRANSFAC - 149738602 149738618 3.0E-06 CTTAAAAAAAATTTTTT 17 V_ELF4_04_M02850 TRANSFAC - 149738603 149738619 1.0E-06 ACTTAAAAAAAATTTTT 17 V_ELF4_04_M02850 TRANSFAC - 149738604 149738620 7.0E-06 GACTTAAAAAAAATTTT 17 V_ELF4_04_M02850 TRANSFAC - 149738605 149738621 1.0E-06 GGACTTAAAAAAAATTT 17 V_TAL1_Q6_M00993 TRANSFAC + 149737356 149737365 7.0E-06 ACCATCTGCT 10 V_SOX13_03_M02797 TRANSFAC - 149738602 149738617 2.0E-06 TTAAAAAAAATTTTTT 16 V_GC_01_M00255 TRANSFAC + 149737137 149737150 4.0E-06 GAGGGGCGGGGCCG 14 V_TCF3_04_M02816 TRANSFAC + 149738048 149738064 9.0E-06 GACAAATCAAAGAATCA 17 V_FOXA2_02_M02853 TRANSFAC + 149732591 149732605 8.0E-06 ACCACTAACAAAGGC 15 V_PR_Q2_M00960 TRANSFAC - 149741061 149741070 9.0E-06 GTAAGAACAG 10 V_SPI1_03_M02078 TRANSFAC - 149737338 149737347 6.0E-06 AGGGGAAGTA 10 V_DBX2_01_M01360 TRANSFAC - 149737943 149737958 7.0E-06 TTGAATTAATCAAGTA 16 V_PR_01_M00954 TRANSFAC - 149740983 149741009 1.0E-06 CTGGTGAGAAGCTCTTGTTCTTAAGAG 27 V_ZFP105_03_M02827 TRANSFAC + 149738397 149738411 4.0E-06 CTCAAAAAAAAAAGA 15 V_ZFP105_03_M02827 TRANSFAC + 149738398 149738412 3.0E-06 TCAAAAAAAAAAGAG 15 V_ZFP105_03_M02827 TRANSFAC + 149738596 149738610 3.0E-06 CTCAAAAAAAAATTT 15 V_MRF2_01_M00454 TRANSFAC - 149737098 149737111 5.0E-06 ATCAACAATACCGC 14 V_SP4_03_M02810 TRANSFAC + 149737117 149737133 2.0E-06 GTCTCCGCCCCCTTCGC 17 V_ER81_02_M02065 TRANSFAC + 149737211 149737220 1.0E-05 GCCGGAAGTG 10 V_SP1_Q6_M00196 TRANSFAC + 149737137 149737149 1.0E-06 GAGGGGCGGGGCC 13 V_SOX_Q6_M01014 TRANSFAC - 149738049 149738061 7.0E-06 TTCTTTGATTTGT 13 V_GADP_01_M01258 TRANSFAC - 149737209 149737220 0.0E+00 CACTTCCGGCTC 12 V_PBX1_01_M00096 TRANSFAC - 149737946 149737954 4.0E-06 ATTAATCAA 9 V_DUXBL_01_M02968 TRANSFAC - 149737941 149737957 6.0E-06 TGAATTAATCAAGTAAG 17 V_OCT1_04_M00138 TRANSFAC + 149741068 149741090 2.0E-06 TACTTAGTATGCAAATATTGTCA 23 V_OCT1_08_M01354 TRANSFAC - 149737943 149737958 2.0E-06 TTGAATTAATCAAGTA 16 V_GR_01_M00955 TRANSFAC - 149740983 149741009 1.0E-05 CTGGTGAGAAGCTCTTGTTCTTAAGAG 27 V_SP1SP3_Q4_M01219 TRANSFAC + 149737121 149737131 4.0E-06 CCGCCCCCTTC 11 V_PIT1_01_M01465 TRANSFAC - 149737943 149737959 7.0E-06 GTTGAATTAATCAAGTA 17 V_ERBETA_Q5_M01875 TRANSFAC + 149732485 149732499 1.0E-05 TCCTAAGTGACCTCG 15 V_TCF7_03_M02817 TRANSFAC + 149738048 149738064 1.0E-05 GACAAATCAAAGAATCA 17 V_KLF7_03_M02773 TRANSFAC - 149737136 149737151 9.0E-06 CCGGCCCCGCCCCTCA 16 V_ARID3A_04_M02735 TRANSFAC - 149738605 149738621 8.0E-06 GGACTTAAAAAAAATTT 17 V_LHX3b_01_M01971 TRANSFAC - 149737946 149737955 5.0E-06 AATTAATCAA 10 V_OCT1_B_M00342 TRANSFAC + 149741075 149741084 0.0E+00 TATGCAAATA 10 V_OCT_Q6_M00795 TRANSFAC - 149741075 149741085 1.0E-06 ATATTTGCATA 11 V_HNF4A_02_M02868 TRANSFAC + 149738497 149738512 1.0E-06 GGAGAAAGTCCACTCT 16 V_GATA4_Q3_M00632 TRANSFAC + 149738402 149738413 5.0E-06 AAAAAAAAGAGA 12 V_SP4_Q5_M01273 TRANSFAC - 149737138 149737148 8.0E-06 GCCCCGCCCCT 11 V_OTX2_Q3_M01719 TRANSFAC + 149737014 149737026 5.0E-06 GGAAGGATTAAAA 13 V_POU5F1_01_M01307 TRANSFAC + 149741075 149741084 2.0E-06 TATGCAAATA 10 V_EHF_06_M02745 TRANSFAC + 149737207 149737221 4.0E-06 AGGAGCCGGAAGTGT 15 V_BRN4_01_M01473 TRANSFAC - 149737943 149737959 4.0E-06 GTTGAATTAATCAAGTA 17 V_OCT2_01_M01368 TRANSFAC + 149741072 149741087 0.0E+00 TAGTATGCAAATATTG 16 V_GFI1B_01_M01058 TRANSFAC + 149736991 149737002 9.0E-06 TAAATCTCTTCA 12 V_PITX1_01_M01484 TRANSFAC + 149737012 149737028 3.0E-06 CCGGAAGGATTAAAAGA 17 V_DMRT7_01_M01151 TRANSFAC - 149741080 149741093 5.0E-06 TTGTGACAATATTT 14 V_ZFP161_04_M02933 TRANSFAC - 149737750 149737763 1.0E-06 GCCGCGCAGAGCCT 14 V_OTX2_01_M01387 TRANSFAC - 149736986 149737002 6.0E-06 TGAAGAGATTTATCTTC 17 V_SPIC_02_M02077 TRANSFAC - 149737338 149737347 9.0E-06 AGGGGAAGTA 10 V_ETS1_B_M00339 TRANSFAC - 149737693 149737707 1.0E-05 CCAGGAAGGGCGTGG 15 V_RXR_RAR_01_M02272 TRANSFAC - 149732492 149732508 7.0E-06 AGGGCACGGCGAGGTCA 17 V_IRF1_Q6_01_M01881 TRANSFAC + 149732605 149732618 6.0E-06 CATTTTCTCTTACT 14 V_PBX_Q3_M00998 TRANSFAC + 149738414 149738425 9.0E-06 GATGGATGGCAG 12 V_SOX14_04_M02901 TRANSFAC + 149738464 149738480 4.0E-06 GTGGTGGGAGGGAACTT 17 V_SRF_06_M02916 TRANSFAC + 149738396 149738412 1.0E-06 CCTCAAAAAAAAAAGAG 17 V_SRF_06_M02916 TRANSFAC + 149738397 149738413 2.0E-06 CTCAAAAAAAAAAGAGA 17 V_SRF_06_M02916 TRANSFAC + 149738594 149738610 1.0E-06 GTCTCAAAAAAAAATTT 17 V_SRF_06_M02916 TRANSFAC + 149738595 149738611 2.0E-06 TCTCAAAAAAAAATTTT 17 V_SRF_06_M02916 TRANSFAC + 149738596 149738612 8.0E-06 CTCAAAAAAAAATTTTT 17 V_SRF_06_M02916 TRANSFAC - 149738602 149738618 4.0E-06 CTTAAAAAAAATTTTTT 17 V_SRF_06_M02916 TRANSFAC - 149738603 149738619 3.0E-06 ACTTAAAAAAAATTTTT 17 V_SRF_06_M02916 TRANSFAC - 149738605 149738621 8.0E-06 GGACTTAAAAAAAATTT 17 V_EWSR1FLI1_01_M02252 TRANSFAC - 149741103 149741120 4.0E-06 GGAAAGAAGGAACCATGT 18 V_ZIC1_04_M02835 TRANSFAC - 149737763 149737776 8.0E-06 TGCCCCAGGGGGGG 14 V_SMAD3_Q6_M00701 TRANSFAC - 149741097 149741105 3.0E-06 TGTCTGTCT 9 V_SOX4_01_M01308 TRANSFAC + 149732597 149732604 1.0E-05 AACAAAGG 8 V_GSC_01_M01428 TRANSFAC + 149737957 149737973 6.0E-06 AACTGTTAATCCGGTAC 17 V_SOX2_Q6_M01272 TRANSFAC - 149732593 149732608 3.0E-06 AATGCCTTTGTTAGTG 16 V_PITX2_01_M01447 TRANSFAC - 149736986 149737002 4.0E-06 TGAAGAGATTTATCTTC 17 V_PIT1_Q6_M00802 TRANSFAC + 149737937 149737954 1.0E-05 ATTTCTTACTTGATTAAT 18 V_MEF2_01_M00006 TRANSFAC + 149738596 149738611 9.0E-06 CTCAAAAAAAAATTTT 16 V_SP1_Q2_01_M00933 TRANSFAC - 149737138 149737147 7.0E-06 CCCCGCCCCT 10 V_MEF2A_05_M01301 TRANSFAC + 149737712 149737723 3.0E-06 GGGTATTTTAAG 12 V_SP1_Q4_01_M00932 TRANSFAC + 149737137 149737149 2.0E-06 GAGGGGCGGGGCC 13 V_OBOX5_01_M01381 TRANSFAC + 149737013 149737029 6.0E-06 CGGAAGGATTAAAAGAG 17 V_OBOX6_02_M03068 TRANSFAC - 149737960 149737974 8.0E-06 AGTACCGGATTAACA 15 V_TCF3_05_M02920 TRANSFAC + 149738595 149738609 2.0E-06 TCTCAAAAAAAAATT 15 V_TCF3_05_M02920 TRANSFAC - 149738607 149738621 5.0E-06 GGACTTAAAAAAAAT 15 V_OBOX6_06_M03067 TRANSFAC - 149737013 149737029 6.0E-06 CTCTTTTAATCCTTCCG 17 V_MIF1_01_M00279 TRANSFAC + 149741015 149741032 1.0E-05 CAGTTGCTCAGCAAACGT 18 V_AR_Q2_M00447 TRANSFAC - 149740989 149741003 0.0E+00 AGAAGCTCTTGTTCT 15 V_DMRT5_01_M01150 TRANSFAC - 149738588 149738602 2.0E-06 TTTTGAGACAGTGTC 15 V_SPI1_02_M02043 TRANSFAC - 149737338 149737347 3.0E-06 AGGGGAAGTA 10

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