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TCF20 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 6942 transcription factor 20 (AR1) chr22 - 42610945 - 42616445 42611445 Transcription Factor Binding Sites   Download all TFBS in the TCF20 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints EOMES_TBX_DBD_dimeric_20_1 SELEX + 42613570 42613589 3.0E-06 TCACACCGGAGTCTGTGTGA 20 EOMES_TBX_DBD_dimeric_20_1 SELEX - 42613570 42613589 3.0E-06 TCACACAGACTCCGGTGTGA 20 SOX10_HMG_full_dimeric_16_1 SELEX - 42611302 42611317 5.0E-06 AACAGTATGCAGTCCT 16 NR4A2_nuclearreceptor_full_monomeric_11_1 SELEX + 42613524 42613534 9.0E-06 CTTAAAGGGCA 11 SOX9_HMG_full_dimeric_16_1 SELEX - 42611302 42611317 7.0E-06 AACAGTATGCAGTCCT 16 RFX4_RFX_DBD_dimeric_16_1 SELEX - 42611272 42611287 5.0E-06 AGTTACCACGGAAACC 16 POU5F1P1_POU_DBD_monomeric_9_1 SELEX + 42614080 42614088 6.0E-06 TATTCAAAT 9 SOX8_HMG_DBD_dimeric_16_1 SELEX - 42611302 42611317 5.0E-06 AACAGTATGCAGTCCT 16 POU2F3_POU_DBD_monomeric_9_1 SELEX + 42614080 42614088 6.0E-06 TATTCAAAT 9 FOXO1_forkhead_DBD_monomeric_8_1 SELEX - 42613483 42613490 7.0E-06 GTAAACAA 8 XBP1_bZIP_DBD_dimeric_12_1 SELEX - 42613560 42613571 1.0E-05 GATGACGTGAGG 12 Pou2f2_POU_DBD_monomeric_9_1 SELEX + 42614080 42614088 4.0E-06 TATTCAAAT 9 Barhl1_homeodomain_DBD_monomeric_10_1 SELEX + 42613593 42613602 7.0E-06 ATTAAATGGT 10 Rfx3_RFX_DBD_dimeric_16_1 SELEX + 42611272 42611287 3.0E-06 GGTTTCCGTGGTAACT 16 Rfx3_RFX_DBD_dimeric_16_1 SELEX - 42611272 42611287 5.0E-06 AGTTACCACGGAAACC 16 FOXJ3_forkhead_DBD_dimeric_14_1 SELEX - 42613484 42613497 6.0E-06 ACAGACAGTAAACA 14 HNF1A_homeodomain_full_dimeric_15_1 SELEX + 42613585 42613599 2.0E-06 TGTGAATGATTAAAT 15 HNF1A_homeodomain_full_dimeric_15_1 SELEX - 42613585 42613599 4.0E-06 ATTTAATCATTCACA 15 OTX2_homeodomain_DBD_monomeric_8_1 SELEX + 42614140 42614147 7.0E-06 TTAATCCT 8 BARHL2_homeodomain_full_monomeric_10_1 SELEX + 42613593 42613602 5.0E-06 ATTAAATGGT 10 RFX2_RFX_DBD_dimeric_16_1 SELEX + 42611272 42611287 4.0E-06 GGTTTCCGTGGTAACT 16 RFX2_RFX_DBD_dimeric_16_1 SELEX - 42611272 42611287 5.0E-06 AGTTACCACGGAAACC 16 HNF1B_homeodomain_full_dimeric_13_1 SELEX + 42613586 42613598 3.0E-06 GTGAATGATTAAA 13 HNF1B_homeodomain_full_dimeric_13_1 SELEX - 42613586 42613598 6.0E-06 TTTAATCATTCAC 13 RFX5_RFX_DBD_dimeric_16_3 SELEX + 42611272 42611287 3.0E-06 GGTTTCCGTGGTAACT 16 RFX5_RFX_DBD_dimeric_16_3 SELEX - 42611272 42611287 2.0E-06 AGTTACCACGGAAACC 16 PITX1_homeodomain_full_monomeric_9_1 SELEX + 42614139 42614147 2.0E-06 TTTAATCCT 9 Myf_MA0055.1 JASPAR - 42610778 42610789 4.0E-06 CAGCAGCAGCAG 12 Myf_MA0055.1 JASPAR - 42610781 42610792 4.0E-06 CAGCAGCAGCAG 12 Mafb_bZIP_DBD_dimeric_18_1 SELEX - 42613557 42613574 7.0E-06 TGTGATGACGTGAGGATT 18 FOXB1_forkhead_full_monomeric_9_1 SELEX - 42613483 42613491 7.0E-06 AGTAAACAA 9 FOXO3_forkhead_full_monomeric_8_1 SELEX - 42613483 42613490 7.0E-06 GTAAACAA 8 HNF1B_homeodomain_full_dimeric_15_1 SELEX + 42613585 42613599 3.0E-06 TGTGAATGATTAAAT 15 HNF1B_homeodomain_full_dimeric_15_1 SELEX - 42613585 42613599 3.0E-06 ATTTAATCATTCACA 15 V_OBOX5_05_M03066 TRANSFAC - 42614135 42614151 2.0E-06 TGTGAGGATTAAATGAG 17 V_FOXA2_04_M02749 TRANSFAC - 42613479 42613495 8.0E-06 AGACAGTAAACAAGTAG 17 V_NRSF_Q4_M01028 TRANSFAC + 42610775 42610793 4.0E-06 TTGCTGCTGCTGCTGCTGG 19 V_EBOX_Q6_01_M01034 TRANSFAC + 42610903 42610912 8.0E-06 CCACATGACC 10 V_POU1F1_Q6_M00744 TRANSFAC + 42613590 42613599 3.0E-06 ATGATTAAAT 10 V_GATA1_03_M00127 TRANSFAC - 42613552 42613565 1.0E-05 GTGAGGATTACAGC 14 V_FOXO3A_Q1_M01137 TRANSFAC - 42613480 42613491 2.0E-06 AGTAAACAAGTA 12 V_PU1_Q4_M01172 TRANSFAC - 42614173 42614191 2.0E-06 TGCTTCTGTTTCCTCATCT 19 V_PAX_Q6_M00808 TRANSFAC + 42613630 42613640 7.0E-06 CTAGAACTCAC 11 V_OBOX5_02_M01480 TRANSFAC - 42614135 42614151 2.0E-06 TGTGAGGATTAAATGAG 17 V_MYF_01_M01302 TRANSFAC - 42610778 42610789 4.0E-06 CAGCAGCAGCAG 12 V_MYF_01_M01302 TRANSFAC - 42610781 42610792 4.0E-06 CAGCAGCAGCAG 12 V_FREAC3_01_M00291 TRANSFAC - 42613480 42613495 3.0E-06 AGACAGTAAACAAGTA 16 V_FOXO1_02_M00474 TRANSFAC + 42613480 42613493 2.0E-06 TACTTGTTTACTGT 14 V_OLF1_01_M00261 TRANSFAC + 42613516 42613537 7.0E-06 GTAAACTCCTTAAAGGGCAGAA 22 V_OBOX2_01_M01364 TRANSFAC - 42614136 42614152 4.0E-06 TTGTGAGGATTAAATGA 17 V_XFD2_01_M00268 TRANSFAC - 42613480 42613493 8.0E-06 ACAGTAAACAAGTA 14 V_NEUROD_02_M01288 TRANSFAC + 42610784 42610795 6.0E-06 CTGCTGCTGGCT 12 V_OBOX2_02_M03064 TRANSFAC - 42614136 42614152 4.0E-06 TTGTGAGGATTAAATGA 17 V_TAL1_01_M01591 TRANSFAC - 42614171 42614183 4.0E-06 TTTCCTCATCTGT 13 V_OSR2_04_M02889 TRANSFAC + 42613474 42613489 0.0E+00 ATATGCTACTTGTTTA 16 V_PITX1_01_M01484 TRANSFAC - 42614136 42614152 3.0E-06 TTGTGAGGATTAAATGA 17 V_XBP1_01_M00251 TRANSFAC - 42613557 42613573 3.0E-06 GTGATGACGTGAGGATT 17 V_NRF2_Q4_M00821 TRANSFAC - 42614051 42614063 1.0E-05 CTGCAGATTCACT 13 V_OTX2_01_M01387 TRANSFAC - 42614135 42614151 7.0E-06 TGTGAGGATTAAATGAG 17 V_OSR1_04_M02888 TRANSFAC + 42613474 42613489 0.0E+00 ATATGCTACTTGTTTA 16 V_HNF1A_Q5_M02013 TRANSFAC - 42613589 42613599 4.0E-06 ATTTAATCATT 11 V_SMAD3_Q6_M00701 TRANSFAC + 42613491 42613499 3.0E-06 TGTCTGTCT 9 V_FOXO1_01_M00473 TRANSFAC - 42613482 42613491 7.0E-06 AGTAAACAAG 10 V_HNF3B_Q6_M02014 TRANSFAC + 42613483 42613491 2.0E-06 TTGTTTACT 9 V_CREB_02_M00113 TRANSFAC - 42613562 42613573 1.0E-05 GTGATGACGTGA 12 V_FOXO4_01_M00472 TRANSFAC - 42613480 42613490 6.0E-06 GTAAACAAGTA 11 V_TCF11MAFG_01_M00284 TRANSFAC - 42614123 42614144 4.0E-06 ATTAAATGAGTTAGTGTATGTG 22 V_OBOX5_01_M01381 TRANSFAC - 42614135 42614151 3.0E-06 TGTGAGGATTAAATGAG 17 V_OBOX3_02_M03065 TRANSFAC - 42614136 42614152 8.0E-06 TTGTGAGGATTAAATGA 17 V_OTX1_01_M01366 TRANSFAC - 42614135 42614151 1.0E-06 TGTGAGGATTAAATGAG 17 V_OBOX6_06_M03067 TRANSFAC + 42614135 42614151 3.0E-06 CTCATTTAATCCTCACA 17 V_OBOX3_01_M01466 TRANSFAC - 42614136 42614152 8.0E-06 TTGTGAGGATTAAATGA 17 V_RFX1_02_M00281 TRANSFAC - 42611271 42611288 3.0E-06 CAGTTACCACGGAAACCA 18 V_OCT4_01_M01125 TRANSFAC + 42614080 42614094 6.0E-06 TATTCAAATGGTGAT 15 V_OTX3_01_M01403 TRANSFAC - 42614136 42614152 9.0E-06 TTGTGAGGATTAAATGA 17

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.