Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

TCEB1 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 6921 transcription elongation factor B (SIII), polypeptide 1 (15kDa, elongin C) chr8 - 74883643 - 74889522 74884143 Transcription Factor Binding Sites   Download all TFBS in the TCEB1 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints POU4F2_POU_full_monomeric_16_1 SELEX + 74883476 74883491 6.0E-06 ACTAATAATAGATTAG 16 BARX1_homeodomain_DBD_dimeric_17_1 SELEX + 74883642 74883658 1.0E-06 CCCTTAAAAAAGAATTT 17 RARA_nuclearreceptor_full_dimeric_18_1 SELEX + 74883414 74883431 7.0E-06 GCGGATCACTTGAGGTCA 18 MEF2D_MADS_DBD_dimeric_12_1 SELEX + 74883476 74883487 0.0E+00 ACTAATAATAGA 12 MEF2D_MADS_DBD_dimeric_12_1 SELEX - 74883476 74883487 9.0E-06 TCTATTATTAGT 12 SOX8_HMG_DBD_dimeric_16_1 SELEX + 74888089 74888104 2.0E-06 AACAGTTTTTAGTGAT 16 ZNF435_C2H2_full_dimeric_18_1 SELEX + 74885036 74885053 1.0E-06 AATGTTAACTGAAAACTA 18 ZNF232_C2H2_full_monomeric_19_1 SELEX + 74883721 74883739 8.0E-06 CAGTTATATGTTACTTAAC 19 ZNF232_C2H2_full_monomeric_19_1 SELEX + 74885037 74885055 0.0E+00 ATGTTAACTGAAAACTAAC 19 STAT1_MA0137.2 JASPAR + 74885245 74885259 2.0E-06 CCTTTCCAGGAAGGC 15 STAT1_MA0137.2 JASPAR - 74888200 74888214 7.0E-06 TCCTTCCTAGAATTT 15 MEF2A_MADS_DBD_dimeric_12_1 SELEX + 74883476 74883487 1.0E-06 ACTAATAATAGA 12 MEF2A_MADS_DBD_dimeric_12_1 SELEX - 74883476 74883487 9.0E-06 TCTATTATTAGT 12 Spz1_MA0111.1 JASPAR + 74884177 74884187 7.0E-06 AGGTTAACAGC 11 FOXK1_forkhead_DBD_putatively-multimeric_10_1 SELEX - 74888582 74888591 7.0E-06 CGCACACAAT 10 POU4F3_POU_DBD_monomeric_16_1 SELEX + 74883476 74883491 1.0E-05 ACTAATAATAGATTAG 16 MEF2B_MADS_full_dimeric_12_1 SELEX + 74883476 74883487 0.0E+00 ACTAATAATAGA 12 MEF2B_MADS_full_dimeric_12_1 SELEX - 74883476 74883487 9.0E-06 TCTATTATTAGT 12 FOXD3_forkhead_DBD_dimeric_14_1 SELEX - 74885032 74885045 7.0E-06 AGTTAACATTGAAT 14 MYBL2_MYB_DBD_monomeric_11_1 SELEX + 74885155 74885165 8.0E-06 CAAACCGTTAC 11 ELF3_ETS_full_monomeric_13_1 SELEX - 74884510 74884522 8.0E-06 CAGACGGAAGTGA 13 MEF2A_MA0052.1 JASPAR - 74883477 74883486 3.0E-06 CTATTATTAG 10 SP1_MA0079.2 JASPAR + 74884141 74884150 3.0E-06 CCCCTCCCCC 10 znf143_MA0088.1 JASPAR + 74884617 74884636 1.0E-06 GGATTCCCAGCATGCAGCGC 20 BCL6B_C2H2_DBD_monomeric_17_1 SELEX - 74884616 74884632 5.0E-06 TGCATGCTGGGAATCCA 17 NFATC1_NFAT_full_dimeric_15_1 SELEX + 74888076 74888090 0.0E+00 TTTCCGCAAAGGAAA 15 NFATC1_NFAT_full_dimeric_15_1 SELEX - 74888076 74888090 1.0E-06 TTTCCTTTGCGGAAA 15 SOX7_HMG_full_dimeric_16_1 SELEX + 74888089 74888104 1.0E-06 AACAGTTTTTAGTGAT 16 ZNF143_C2H2_DBD_monomeric_16_1 SELEX + 74884620 74884635 4.0E-06 TTCCCAGCATGCAGCG 16 ZNF143_C2H2_DBD_monomeric_16_1 SELEX - 74884699 74884714 4.0E-06 ATCCCAGAATGCAGTG 16 TEAD3_TEA_DBD_dimeric_17_1 SELEX - 74885305 74885321 1.0E-06 ACATTCTCTTCATGCCA 17 RFX5_RFX_DBD_dimeric_16_3 SELEX - 74884896 74884911 7.0E-06 CGTTAGCAAAGAAACC 16 Stat3_MA0144.1 JASPAR - 74885247 74885256 4.0E-06 TTCCTGGAAA 10 Stat3_MA0144.1 JASPAR + 74885248 74885257 1.0E-06 TTCCAGGAAG 10 Stat3_MA0144.1 JASPAR + 74888203 74888212 7.0E-06 TTCTAGGAAG 10 PRDM1_C2H2_full_monomeric-or-dimeric_15_1 SELEX + 74883990 74884004 7.0E-06 AGAAAGGAAAAGCGA 15 SOX21_HMG_DBD_dimeric_16_1 SELEX + 74888089 74888104 6.0E-06 AACAGTTTTTAGTGAT 16 Rhox11_homeodomain_DBD_monomeric_9_1 SELEX + 74884652 74884660 4.0E-06 TGCTGTAAA 9 MYBL1_MYB_DBD_monomeric_11_1 SELEX + 74885155 74885165 9.0E-06 CAAACCGTTAC 11 Zfp740_C2H2_DBD_monomeric_10_1 SELEX + 74884376 74884385 1.0E-05 GCCCCCCCAC 10 ETV6_ETS_full_monomeric_10_1 SELEX - 74884430 74884439 2.0E-06 AGCGGAAGTA 10 PLAG1_MA0163.1 JASPAR + 74883401 74883414 4.0E-06 GAGGCCGACGGGGG 14 NRF1_NRF_full_dimeric_12_1 SELEX + 74888374 74888385 3.0E-06 TGCGCACGCGCA 12 NRF1_NRF_full_dimeric_12_1 SELEX - 74888374 74888385 4.0E-06 TGCGCGTGCGCA 12 PAX7_PAX_full_dimeric_10_1 SELEX + 74883481 74883490 8.0E-06 TAATAGATTA 10 V_KLF15_Q2_M01714 TRANSFAC - 74885193 74885206 5.0E-06 GAAGCGGGGCGTGG 14 V_STAT5A_Q6_M01890 TRANSFAC + 74885244 74885256 8.0E-06 ACCTTTCCAGGAA 13 V_DBX1_01_M01483 TRANSFAC - 74883474 74883490 0.0E+00 TAATCTATTATTAGTAG 17 V_FOXP3_Q4_M00992 TRANSFAC + 74888514 74888530 2.0E-06 GTGATGCTGTTTCTGGC 17 V_GEN_INI_B_M00315 TRANSFAC + 74885007 74885014 1.0E-05 CCTCATTT 8 V_BCL6_Q3_01_M02085 TRANSFAC - 74888203 74888212 2.0E-06 CTTCCTAGAA 10 V_OSF2_Q6_M00731 TRANSFAC - 74888969 74888976 1.0E-05 ACCACAAA 8 V_MAFK_03_M02776 TRANSFAC + 74888929 74888943 4.0E-06 GGAAAGTGCTTACTT 15 V_HNF1_02_M01379 TRANSFAC + 74885034 74885050 8.0E-06 TCAATGTTAACTGAAAA 17 V_HMGIY_Q3_M01010 TRANSFAC - 74883346 74883360 4.0E-06 CCTTGAAATTCTTTA 15 V_HP1SITEFACTOR_Q6_M00725 TRANSFAC - 74884944 74884955 3.0E-06 ACTTTTCACCAG 12 V_MAFB_05_M02775 TRANSFAC + 74888930 74888946 9.0E-06 GAAAGTGCTTACTTTTA 17 V_LRH1_Q5_01_M02098 TRANSFAC + 74883353 74883363 2.0E-06 TTTCAAGGCCA 11 V_SPIB_02_M02041 TRANSFAC - 74884430 74884439 1.0E-06 AGCGGAAGTA 10 V_IK_Q5_M01169 TRANSFAC + 74883396 74883405 3.0E-06 TTTGGGAGGC 10 V_MEF2_02_M00231 TRANSFAC + 74883470 74883491 1.0E-06 GTCTCTACTAATAATAGATTAG 22 V_ZTA_Q2_M00711 TRANSFAC + 74885156 74885168 6.0E-06 AAACCGTTACTCA 13 V_AP2_Q6_01_M00915 TRANSFAC - 74888784 74888796 1.0E-05 GGCTCCCCAGGCC 13 V_SP1_03_M02281 TRANSFAC + 74884141 74884150 3.0E-06 CCCCTCCCCC 10 V_DLX2_01_M01468 TRANSFAC - 74884642 74884657 1.0E-05 ACAGCAATTGGATCAG 16 V_SP1_02_M01303 TRANSFAC - 74884378 74884388 5.0E-06 GGGGTGGGGGG 11 V_PU1_Q4_M01172 TRANSFAC + 74885004 74885022 2.0E-06 TGGCCTCATTTCCTCTCTT 19 V_PU1_Q4_M01172 TRANSFAC + 74888983 74889001 4.0E-06 TATATGTAGTTCCTTTTCT 19 V_LYF1_01_M00141 TRANSFAC + 74883396 74883404 9.0E-06 TTTGGGAGG 9 V_STAT4_Q4_M01666 TRANSFAC + 74883753 74883766 9.0E-06 TTAAGAGAAACTCA 14 V_LXRB_RXRA_Q5_M02021 TRANSFAC + 74883424 74883438 2.0E-06 TGAGGTCAGGAGTTC 15 V_RPC155_01_M01798 TRANSFAC + 74883429 74883444 0.0E+00 TCAGGAGTTCCAGACC 16 V_SPIC_01_M02042 TRANSFAC - 74884430 74884439 1.0E-06 AGCGGAAGTA 10 V_GEN_INI3_B_M00314 TRANSFAC + 74885007 74885014 1.0E-05 CCTCATTT 8 V_GCM1_04_M02862 TRANSFAC - 74884546 74884562 9.0E-06 CTACTATAGGGGAAAAG 17 V_IRF2_01_M00063 TRANSFAC + 74883996 74884008 4.0E-06 GAAAAGCGACAGG 13 V_ERF_01_M01984 TRANSFAC - 74884430 74884439 5.0E-06 AGCGGAAGTA 10 V_ZBP89_Q4_M01816 TRANSFAC + 74884142 74884151 4.0E-06 CCCTCCCCCA 10 V_RSRFC4_Q2_M00407 TRANSFAC + 74883474 74883490 0.0E+00 CTACTAATAATAGATTA 17 V_IRF3_Q3_M01279 TRANSFAC - 74883992 74884004 5.0E-06 TCGCTTTTCCTTT 13 V_MYBL1_03_M02780 TRANSFAC + 74885152 74885168 2.0E-06 TGCCAAACCGTTACTCA 17 V_MAZ_Q6_01_M02023 TRANSFAC - 74884137 74884150 3.0E-06 GGGGGAGGGGAGAA 14 V_LXR_DR4_Q3_M00766 TRANSFAC - 74883416 74883431 6.0E-06 TGACCTCAAGTGATCC 16 V_TTF1_Q6_M00794 TRANSFAC - 74883418 74883429 7.0E-06 ACCTCAAGTGAT 12 V_MEF2_03_M00232 TRANSFAC + 74883470 74883491 2.0E-06 GTCTCTACTAATAATAGATTAG 22 V_ELF5_01_M01197 TRANSFAC - 74888989 74888999 7.0E-06 AAAAGGAACTA 11 V_BBX_04_M02843 TRANSFAC - 74885033 74885049 7.0E-06 TTTCAGTTAACATTGAA 17 V_BBX_04_M02843 TRANSFAC + 74885034 74885050 8.0E-06 TCAATGTTAACTGAAAA 17 V_ELK1_02_M00025 TRANSFAC - 74884510 74884523 7.0E-06 CCAGACGGAAGTGA 14 V_NCX_02_M01420 TRANSFAC - 74883474 74883490 3.0E-06 TAATCTATTATTAGTAG 17 V_HB24_01_M01399 TRANSFAC + 74883478 74883492 3.0E-06 TAATAATAGATTAGT 15 V_STAT4_Q5_M02117 TRANSFAC + 74883753 74883762 8.0E-06 TTAAGAGAAA 10 V_STAF_02_M00264 TRANSFAC + 74884618 74884638 1.0E-06 GATTCCCAGCATGCAGCGCAG 21 V_STAF_02_M00264 TRANSFAC - 74884757 74884777 6.0E-06 AAGTCCCAGGATGCAGGGCTG 21 V_STAT3_03_M01595 TRANSFAC - 74885243 74885258 9.0E-06 CCTTCCTGGAAAGGTG 16 V_STAT3_03_M01595 TRANSFAC + 74885246 74885261 5.0E-06 CTTTCCAGGAAGGCTG 16 V_STAT3_03_M01595 TRANSFAC + 74888201 74888216 7.0E-06 AATTCTAGGAAGGAGG 16 V_ISGF4G_04_M02875 TRANSFAC - 74885284 74885297 4.0E-06 GGAAAACAGTAGAA 14 V_LRH1_Q5_M01142 TRANSFAC - 74883353 74883364 3.0E-06 CTGGCCTTGAAA 12 V_GABPBETA_Q3_M01876 TRANSFAC - 74884429 74884439 4.0E-06 AGCGGAAGTAA 11 V_GABPBETA_Q3_M01876 TRANSFAC - 74885009 74885019 8.0E-06 AGAGGAAATGA 11 V_TAL1_01_M01591 TRANSFAC + 74888991 74889003 6.0E-06 GTTCCTTTTCTGC 13 V_ZBTB3_03_M02825 TRANSFAC + 74884694 74884710 0.0E+00 GAGAGCACTGCATTCTG 17 V_GEN_INI2_B_M00313 TRANSFAC + 74885007 74885014 1.0E-05 CCTCATTT 8 V_TCF1_06_M02815 TRANSFAC + 74885034 74885050 7.0E-06 TCAATGTTAACTGAAAA 17 V_ZFP206_01_M01742 TRANSFAC + 74888374 74888384 3.0E-06 TGCGCACGCGC 11 V_ZFP206_01_M01742 TRANSFAC - 74888375 74888385 7.0E-06 TGCGCGTGCGC 11 V_STAT1STAT1_Q3_M01212 TRANSFAC + 74885246 74885258 6.0E-06 CTTTCCAGGAAGG 13 V_NRF1_Q6_M00652 TRANSFAC - 74888374 74888383 6.0E-06 CGCGTGCGCA 10 V_RSRFC4_01_M00026 TRANSFAC + 74883474 74883489 3.0E-06 CTACTAATAATAGATT 16 V_RSRFC4_01_M00026 TRANSFAC - 74883474 74883489 0.0E+00 AATCTATTATTAGTAG 16 V_PLZF_02_M01075 TRANSFAC + 74883334 74883362 8.0E-06 GTTTTAAGACACTAAAGAATTTCAAGGCC 29 V_T3RBETA_Q6_01_M02119 TRANSFAC + 74883416 74883432 2.0E-06 GGATCACTTGAGGTCAG 17 V_ETS1_B_M00339 TRANSFAC - 74885005 74885019 1.0E-05 AGAGGAAATGAGGCC 15 V_ZFP281_01_M01597 TRANSFAC - 74884141 74884151 1.0E-06 TGGGGGAGGGG 11 V_ZFP281_01_M01597 TRANSFAC - 74884380 74884390 1.0E-06 TGGGGGTGGGG 11 V_RARA_03_M02787 TRANSFAC + 74885270 74885285 8.0E-06 AAATAAAGTTCACCTT 16 V_LXRA_RXRA_Q3_M00647 TRANSFAC + 74883422 74883436 1.0E-06 CTTGAGGTCAGGAGT 15 V_SOX8_03_M02808 TRANSFAC - 74883474 74883490 6.0E-06 TAATCTATTATTAGTAG 17 V_ZFP281_04_M02831 TRANSFAC + 74885204 74885218 6.0E-06 TTCCCACCCCCCCGC 15 V_FOXO1_04_M01969 TRANSFAC - 74884797 74884816 3.0E-06 GTAACCACCAAAATCTTAAC 20 V_HOXD8_01_M01432 TRANSFAC - 74883474 74883490 5.0E-06 TAATCTATTATTAGTAG 17 V_IRF1_01_M00062 TRANSFAC + 74883996 74884008 4.0E-06 GAAAAGCGACAGG 13 V_BSX_01_M01442 TRANSFAC - 74884642 74884657 6.0E-06 ACAGCAATTGGATCAG 16 V_UF1H3BETA_Q6_M01068 TRANSFAC - 74884140 74884153 0.0E+00 TTTGGGGGAGGGGA 14 V_GLIS2_04_M02863 TRANSFAC - 74883471 74883484 3.0E-06 ATTATTAGTAGAGA 14 V_STAT1_05_M01260 TRANSFAC + 74888200 74888221 9.0E-06 AAATTCTAGGAAGGAGGAGCCG 22 V_PAX4_04_M00380 TRANSFAC + 74885046 74885075 0.0E+00 GAAAACTAACCACGTCCCCCACTCCACCCG 30 V_SPI1_02_M02043 TRANSFAC - 74884430 74884439 3.0E-06 AGCGGAAGTA 10 V_SPI1_02_M02043 TRANSFAC - 74888989 74888998 1.0E-05 AAAGGAACTA 10 V_T3RALPHA_Q6_M01724 TRANSFAC + 74883422 74883432 1.0E-06 CTTGAGGTCAG 11 V_HSF1_Q6_01_M02017 TRANSFAC + 74888198 74888211 5.0E-06 TAAAATTCTAGGAA 14

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.