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T Entrez Description Chrom. Strand Promoter (Start - Stop) TSS Motifs 6862 T, brachyury homolog (mouse) chr6 - 166581657 - 166587157 166582157 T_TBX_full_dimeric_16_1 T_MA0009.1 V_BRACH_01_M00150 Transcription Factor Binding Sites   Download all TFBS in the T promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints ESRRG_nuclearreceptor_full_dimeric_17_1 SELEX + 166582256 166582272 1.0E-06 AAGGTGGGAGAAGGTCG 17 NFYA_MA0060.1 JASPAR - 166581439 166581454 4.0E-06 CTCGGCCAATGGGAGG 16 HOXD11_homeodomain_DBD_monomeric_10_2 SELEX - 166582356 166582365 1.0E-06 GGTAATAAAA 10 Esrra_nuclearreceptor_DBD_dimeric_17_1 SELEX + 166582256 166582272 6.0E-06 AAGGTGGGAGAAGGTCG 17 MEF2A_MA0052.1 JASPAR - 166581364 166581373 5.0E-06 CTATTTATGG 10 HOXD13_homeodomain_DBD_monomeric_10_1 SELEX + 166582165 166582174 9.0E-06 CTTATAAAAA 10 FOXO4_forkhead_DBD_putatively-multimeric_12_1 SELEX + 166581969 166581980 2.0E-06 TGTCCCCACACG 12 HOXC11_homeodomain_full_monomeric_11_2 SELEX - 166582355 166582365 2.0E-06 GGTAATAAAAC 11 SP1_MA0079.2 JASPAR - 166581261 166581270 3.0E-06 CCCCTCCCCC 10 FOXB1_forkhead_DBD_putative-multimer_14_1 SELEX - 166582233 166582246 2.0E-06 CAATGACACAGCAG 14 SPDEF_ETS_full_putative-multimer_15_1 SELEX - 166581532 166581546 3.0E-06 GGGGCCCCGGATTTA 15 HOXA13_homeodomain_full_monomeric_10_1 SELEX + 166582165 166582174 7.0E-06 CTTATAAAAA 10 ID4_bHLH_DBD_dimeric_10_1 SELEX + 166581963 166581972 3.0E-06 TGCACCTGTC 10 HOXA13_homeodomain_full_monomeric_11_1 SELEX + 166582164 166582174 4.0E-06 TCTTATAAAAA 11 ELF1_ETS_full_monomeric_12_1 SELEX + 166586207 166586218 9.0E-06 AACACGGAAATG 12 HOXC13_homeodomain_DBD_monomeric_10_1 SELEX + 166582165 166582174 6.0E-06 CTTATAAAAA 10 FOXO3_forkhead_full_putatively-multimeric_11_1 SELEX + 166581969 166581979 4.0E-06 TGTCCCCACAC 11 ELF3_ETS_DBD_monomeric_12_1 SELEX + 166586207 166586218 1.0E-05 AACACGGAAATG 12 FOXO6_forkhead_DBD_putatively-multimeric_14_1 SELEX + 166581969 166581982 1.0E-06 TGTCCCCACACGTC 14 FOXO1_forkhead_DBD_putatively-multimeric_12_1 SELEX + 166581969 166581980 2.0E-06 TGTCCCCACACG 12 Hoxa11_homeodomain_DBD_monomeric_11_1 SELEX - 166582355 166582365 1.0E-06 GGTAATAAAAC 11 NFE2L2_MA0150.1 JASPAR - 166582234 166582244 1.0E-06 ATGACACAGCA 11 HOXA10_homeodomain_DBD_monomeric_11_1 SELEX - 166582355 166582365 1.0E-06 GGTAATAAAAC 11 Irx3_homeodomain_DBD_dimeric_12_1 SELEX - 166581523 166581534 1.0E-06 TTACATGAAACA 12 V_CDX2_Q5_01_M01659 TRANSFAC + 166581363 166581373 8.0E-06 CCCATAAATAG 11 V_MYOD_Q6_M00184 TRANSFAC + 166581963 166581972 7.0E-06 TGCACCTGTC 10 V_EBF_Q6_M00977 TRANSFAC - 166581335 166581345 9.0E-06 GTCCCCAGAGA 11 V_FXR_Q3_M00631 TRANSFAC - 166581294 166581307 1.0E-06 CAAGTGGAATAACT 14 V_AR_02_M00953 TRANSFAC - 166586796 166586822 4.0E-06 ACAGTGATCACAGCATGTTCTGATTAG 27 V_E2F4_Q6_M02090 TRANSFAC - 166581046 166581055 3.0E-06 GCGGGAAAGA 10 V_BCL6B_03_M02740 TRANSFAC + 166586229 166586244 5.0E-06 TCTATCTAAGAAACAG 16 V_ETS_B_M00340 TRANSFAC - 166586978 166586991 4.0E-06 AACAGGAAGCGCTA 14 V_SP1_03_M02281 TRANSFAC - 166581261 166581270 3.0E-06 CCCCTCCCCC 10 V_AREB6_04_M00415 TRANSFAC + 166581522 166581530 8.0E-06 CTGTTTCAT 9 V_AREB6_04_M00415 TRANSFAC - 166586236 166586244 8.0E-06 CTGTTTCTT 9 V_NKX24_01_M01350 TRANSFAC + 166581297 166581312 1.0E-06 TATTCCACTTGAACTC 16 V_SP1_02_M01303 TRANSFAC + 166581282 166581292 5.0E-06 GGGGTGGGGAG 11 V_HOXD13_01_M01404 TRANSFAC + 166582162 166582177 9.0E-06 TCTCTTATAAAAACAG 16 V_HOXC13_01_M01317 TRANSFAC + 166582161 166582176 9.0E-06 CTCTCTTATAAAAACA 16 V_AR_03_M00956 TRANSFAC - 166586796 166586822 1.0E-05 ACAGTGATCACAGCATGTTCTGATTAG 27 V_GC_01_M00255 TRANSFAC + 166586942 166586955 4.0E-06 GAGGGGTGGGGCTT 14 V_PR_01_M00954 TRANSFAC - 166586796 166586822 1.0E-05 ACAGTGATCACAGCATGTTCTGATTAG 27 V_FKLF_Q5_M01837 TRANSFAC + 166586893 166586902 2.0E-06 GGGGTGGGAG 10 V_BEL1_B_M00312 TRANSFAC - 166581794 166581821 6.0E-06 GGACAGGTGAGGCCGCGCGAACGTTCCA 28 V_HOXB13_01_M01467 TRANSFAC - 166582352 166582367 9.0E-06 AAGGTAATAAAACAAC 16 V_NKX26_01_M01322 TRANSFAC + 166581297 166581312 4.0E-06 TATTCCACTTGAACTC 16 V_HOXB9_01_M01426 TRANSFAC - 166582352 166582367 3.0E-06 AAGGTAATAAAACAAC 16 V_CDX2_01_M01449 TRANSFAC - 166582353 166582368 0.0E+00 AAAGGTAATAAAACAA 16 V_NKX25_Q5_M01043 TRANSFAC + 166581299 166581308 7.0E-06 TTCCACTTGA 10 V_CDX1_01_M01373 TRANSFAC - 166582353 166582368 0.0E+00 AAAGGTAATAAAACAA 16 V_ZIC3_05_M02941 TRANSFAC - 166586803 166586817 7.0E-06 GATCACAGCATGTTC 15 V_MEF2_Q6_01_M00941 TRANSFAC - 166581366 166581377 1.0E-05 GGCTCTATTTAT 12 V_HOXA11_01_M01378 TRANSFAC - 166582353 166582368 9.0E-06 AAAGGTAATAAAACAA 16 V_ISGF4G_04_M02875 TRANSFAC + 166582169 166582182 1.0E-06 TAAAAACAGGACTT 14 V_MAF_Q6_01_M00983 TRANSFAC + 166582234 166582244 4.0E-06 TGCTGTGTCAT 11 V_KAISO_01_M01119 TRANSFAC - 166586769 166586778 1.0E-06 TTCCTGCTAA 10 V_BCL6B_04_M02844 TRANSFAC + 166581355 166581370 1.0E-05 GTGCCCTCCCCATAAA 16 V_ZFP187_04_M02934 TRANSFAC - 166586991 166587006 2.0E-06 GTACCCTTGTTCTTCA 16 V_NKX25_03_M01414 TRANSFAC + 166581297 166581312 1.0E-06 TATTCCACTTGAACTC 16 V_NFY_01_M00287 TRANSFAC - 166581439 166581454 5.0E-06 CTCGGCCAATGGGAGG 16 V_NRF2_Q4_M00821 TRANSFAC + 166582233 166582245 0.0E+00 CTGCTGTGTCATT 13 V_ASCL2_04_M02841 TRANSFAC - 166581279 166581294 6.0E-06 TTCTCCCCACCCCTCT 16 V_STAT1STAT1_Q3_M01212 TRANSFAC + 166582247 166582259 8.0E-06 CTTTCACGGAAGG 13 V_ZFP281_01_M01597 TRANSFAC + 166581260 166581270 2.0E-06 GGGGGGAGGGG 11 V_NFE2_01_M00037 TRANSFAC - 166586170 166586180 8.0E-06 TGCTGAGTCCC 11 V_NFE2L2_01_M02263 TRANSFAC - 166582234 166582244 1.0E-06 ATGACACAGCA 11 V_HOXA10_01_M01464 TRANSFAC - 166582352 166582367 2.0E-06 AAGGTAATAAAACAAC 16 V_NFYA_Q5_M02106 TRANSFAC - 166581439 166581452 3.0E-06 CGGCCAATGGGAGG 14 V_HOXD10_01_M01375 TRANSFAC - 166582351 166582367 1.0E-06 AAGGTAATAAAACAACC 17 V_TCF11MAFG_01_M00284 TRANSFAC - 166582228 166582249 1.0E-06 AAGCAATGACACAGCAGAAACC 22 V_NKX21_01_M01312 TRANSFAC + 166581297 166581312 1.0E-06 TATTCCACTTGAACTC 16 V_HOXC9_01_M01416 TRANSFAC - 166582353 166582368 3.0E-06 AAAGGTAATAAAACAA 16 V_OCT4_01_M01125 TRANSFAC + 166581522 166581536 6.0E-06 CTGTTTCATGTAAAT 15

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.