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SYN1 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 6853 synapsin I chrX - 47478756 - 47484256 47479256 Transcription Factor Binding Sites   Download all TFBS in the SYN1 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints NHLH1_MA0048.1 JASPAR - 47479204 47479215 8.0E-06 GCGCAGCTGTGC 12 NFYA_MA0060.1 JASPAR + 47483310 47483325 1.0E-06 AGTAGCCAATCAGGAA 16 XBP1_bZIP_DBD_dimeric_12_1 SELEX + 47479406 47479417 9.0E-06 AGTGACGTCAGC 12 XBP1_bZIP_DBD_dimeric_12_1 SELEX - 47479406 47479417 5.0E-06 GCTGACGTCACT 12 Creb5_bZIP_DBD_dimeric_12_1 SELEX - 47479406 47479417 6.0E-06 GCTGACGTCACT 12 JDP2_bZIP_full_dimeric_12_1 SELEX - 47479406 47479417 6.0E-06 GCTGACGTCACT 12 SP1_MA0079.2 JASPAR + 47479526 47479535 3.0E-06 CCCCTCCCCC 10 Mafb_bZIP_DBD_dimeric_17_1 SELEX + 47479426 47479442 8.0E-06 AGTGCTGAGGCGGCGGT 17 CREB3_bZIP_full_dimeric_14_1 SELEX + 47479405 47479418 4.0E-06 GAGTGACGTCAGCG 14 REST_MA0138.2 JASPAR - 47479469 47479489 0.0E+00 TTCAGCACCGCGGACAGTGCC 21 PLAG1_MA0163.1 JASPAR + 47483370 47483383 6.0E-06 GAGGCTCTAAGGGG 14 NRF1_NRF_full_dimeric_12_1 SELEX + 47479498 47479509 6.0E-06 TGCGCACGCGCC 12 V_ATF_01_M00017 TRANSFAC - 47479405 47479418 0.0E+00 CGCTGACGTCACTC 14 V_TCFE2A_04_M02927 TRANSFAC + 47479283 47479299 8.0E-06 CAGCGCAGATGGTCGCG 17 V_YY1_02_M00069 TRANSFAC - 47479281 47479300 3.0E-06 GCGCGACCATCTGCGCTGCG 20 V_NRSF_Q4_M01028 TRANSFAC + 47479470 47479488 0.0E+00 GCACTGTCCGCGGTGCTGA 19 V_NFY_Q6_M00185 TRANSFAC + 47483312 47483322 1.0E-06 TAGCCAATCAG 11 V_CREB_Q4_M00178 TRANSFAC + 47479406 47479417 9.0E-06 AGTGACGTCAGC 12 V_CREB_Q4_01_M00917 TRANSFAC - 47479408 47479418 2.0E-06 CGCTGACGTCA 11 V_SP1_03_M02281 TRANSFAC + 47479526 47479535 3.0E-06 CCCCTCCCCC 10 V_HEN1_01_M00068 TRANSFAC + 47479199 47479220 7.0E-06 CAGGAGCACAGCTGCGCTCTCA 22 V_HEN1_01_M00068 TRANSFAC - 47479199 47479220 3.0E-06 TGAGAGCGCAGCTGTGCTCCTG 22 V_NFY_Q6_01_M00775 TRANSFAC + 47483309 47483321 2.0E-06 AAGTAGCCAATCA 13 V_NRSE_B_M00325 TRANSFAC - 47479469 47479489 0.0E+00 TTCAGCACCGCGGACAGTGCC 21 V_WT1_Q6_01_M02036 TRANSFAC - 47479457 47479466 4.0E-06 CGCCCCCGCC 10 V_NFY_C_M00209 TRANSFAC - 47483279 47483292 3.0E-06 CTTGATTGGCCGGC 14 V_NFY_C_M00209 TRANSFAC - 47483310 47483323 0.0E+00 CCTGATTGGCTACT 14 V_GCM1_04_M02862 TRANSFAC + 47479537 47479553 7.0E-06 CTCTGATAGGGGATGCG 17 V_KROX_Q6_M00982 TRANSFAC - 47479173 47479186 9.0E-06 TCCGCCCCCGCGGC 14 V_EGR1_Q6_M01873 TRANSFAC + 47479176 47479185 4.0E-06 GCGGGGGCGG 10 V_PAX5_01_M00143 TRANSFAC + 47479253 47479280 1.0E-06 GACTGAGGCAGCGCTGAGTCGCCGGCGC 28 V_CREBATF_Q6_M00981 TRANSFAC + 47479407 47479415 9.0E-06 GTGACGTCA 9 V_REST_01_M01256 TRANSFAC + 47479465 47479486 0.0E+00 CGAAGGCACTGTCCGCGGTGCT 22 V_ATF3_Q6_M00513 TRANSFAC - 47479405 47479418 2.0E-06 CGCTGACGTCACTC 14 V_PPARA_02_M00518 TRANSFAC + 47479558 47479576 9.0E-06 TTGGGGAATGGGGGTTGGG 19 V_CREB_Q2_01_M00916 TRANSFAC + 47479406 47479419 2.0E-06 AGTGACGTCAGCGC 14 V_MZF1_02_M00084 TRANSFAC - 47479523 47479535 3.0E-06 GGGGGAGGGGAAA 13 V_CREM_Q6_M01820 TRANSFAC + 47479408 47479418 2.0E-06 TGACGTCAGCG 11 V_VJUN_01_M00036 TRANSFAC + 47479404 47479419 3.0E-06 CGAGTGACGTCAGCGC 16 V_CAAT_01_M00254 TRANSFAC + 47483310 47483321 0.0E+00 AGTAGCCAATCA 12 V_ATF1_Q6_M00691 TRANSFAC - 47479408 47479418 5.0E-06 CGCTGACGTCA 11 V_ALPHACP1_01_M00687 TRANSFAC + 47483312 47483322 3.0E-06 TAGCCAATCAG 11 V_MAZR_01_M00491 TRANSFAC - 47479523 47479535 1.0E-05 GGGGGAGGGGAAA 13 V_CREBP1_Q2_M00179 TRANSFAC + 47479406 47479417 5.0E-06 AGTGACGTCAGC 12 V_CREBP1_Q2_M00179 TRANSFAC - 47479406 47479417 1.0E-06 GCTGACGTCACT 12 V_SP4_04_M02914 TRANSFAC - 47483151 47483165 8.0E-06 CAGAGGCGTGGCCGA 15 V_HEN1_02_M00058 TRANSFAC + 47479199 47479220 7.0E-06 CAGGAGCACAGCTGCGCTCTCA 22 V_HEN1_02_M00058 TRANSFAC - 47479199 47479220 4.0E-06 TGAGAGCGCAGCTGTGCTCCTG 22 V_GATA3_01_M00077 TRANSFAC - 47479309 47479317 4.0E-06 GAGATAGGG 9 V_ZFP206_01_M01742 TRANSFAC + 47479498 47479508 3.0E-06 TGCGCACGCGC 11 V_NFY_01_M00287 TRANSFAC + 47483310 47483325 1.0E-06 AGTAGCCAATCAGGAA 16 V_NRSF_01_M00256 TRANSFAC - 47479469 47479489 0.0E+00 TTCAGCACCGCGGACAGTGCC 21 V_P53_05_M01655 TRANSFAC + 47483295 47483314 7.0E-06 GTGCCTGCCAGGACAAGTAG 20 V_NRF1_Q6_M00652 TRANSFAC - 47479498 47479507 6.0E-06 CGCGTGCGCA 10 V_REST_02_M02256 TRANSFAC - 47479469 47479489 0.0E+00 TTCAGCACCGCGGACAGTGCC 21 V_ZFP281_01_M01597 TRANSFAC - 47479526 47479536 3.0E-06 AGGGGGAGGGG 11 V_ZFP281_01_M01597 TRANSFAC + 47479566 47479576 9.0E-06 TGGGGGTTGGG 11 V_NFYA_Q5_M02106 TRANSFAC + 47483281 47483294 9.0E-06 CGGCCAATCAAGAA 14 V_NFYA_Q5_M02106 TRANSFAC + 47483312 47483325 1.0E-06 TAGCCAATCAGGAA 14 V_ATF_B_M00338 TRANSFAC + 47479407 47479418 1.0E-06 GTGACGTCAGCG 12

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.