Search TFs
or Genes
Construction
and Validation
Optimal
Promoter Size
Download Citation and
Contact

XCL2


EntrezDescriptionChrom.StrandPromoter
(Start - Stop)
TSS
6846 chemokine (C motif) ligand 2 chr1 -168512735 - 168518235 168513235

Transcription Factor Binding Sites

 
Download all TFBS in the XCL2 promoter
 
MotifSourceStrandStartStop PValueMatch
Sequence
Overlap w/
Footprints
GMEB2_SAND_DBD_dimeric_8_2 SELEX + 168515436 168515443 7.0E-06 TTACGTAA 8
GMEB2_SAND_DBD_dimeric_8_2 SELEX - 168515436 168515443 7.0E-06 TTACGTAA 8
MSX2_homeodomain_DBD_dimeric_18_1 SELEX + 168515443 168515460 6.0E-06 ATAATTGCTCAACAATTA 18
MSX2_homeodomain_DBD_dimeric_18_1 SELEX - 168515444 168515461 1.0E-06 CTAATTGTTGAGCAATTA 18
MSX2_homeodomain_DBD_dimeric_18_1 SELEX - 168515455 168515472 2.0E-06 TTATTTAAAAACTAATTG 18
POU3F3_POU_DBD_monomeric_12_1 SELEX + 168515473 168515484 4.0E-06 ATGAATTATTTT 12
Arx_homeodomain_DBD_dimeric_13_1 SELEX + 168515469 168515481 4.0E-06 ATAAATGAATTAT 13
POU3F2_POU_DBD_monomeric_13_1 SELEX + 168515472 168515484 7.0E-06 AATGAATTATTTT 13
TEF_bZIP_DBD_dimeric_12_1 SELEX + 168515434 168515445 0.0E+00 TGTTACGTAATA 12
TEF_bZIP_DBD_dimeric_12_1 SELEX - 168515434 168515445 0.0E+00 TATTACGTAACA 12
FOXL1_forkhead_full_dimeric_13_1 SELEX + 168515464 168515476 4.0E-06 TTTAAATAAATGA 13
POU3F4_POU_DBD_monomeric_11_1 SELEX + 168515474 168515484 1.0E-05 TGAATTATTTT 11
HLF_bZIP_full_dimeric_12_1 SELEX + 168515434 168515445 1.0E-06 TGTTACGTAATA 12
HLF_bZIP_full_dimeric_12_1 SELEX - 168515434 168515445 0.0E+00 TATTACGTAACA 12
Alx1_homeodomain_DBD_dimeric_13_1 SELEX + 168515469 168515481 6.0E-06 ATAAATGAATTAT 13
Alx1_homeodomain_DBD_dimeric_13_1 SELEX - 168515469 168515481 7.0E-06 ATAATTCATTTAT 13
NFIL3_MA0025.1 JASPAR - 168515433 168515443 6.0E-06 TTACGTAACAG 11
NFIL3_MA0025.1 JASPAR + 168515436 168515446 3.0E-06 TTACGTAATAA 11
MEF2A_MADS_DBD_dimeric_12_1 SELEX - 168515477 168515488 5.0E-06 TTTAAAAATAAT 12
DBP_bZIP_full_dimeric_12_1 SELEX + 168515434 168515445 0.0E+00 TGTTACGTAATA 12
DBP_bZIP_full_dimeric_12_1 SELEX - 168515434 168515445 0.0E+00 TATTACGTAACA 12
ISX_homeodomain_DBD_dimeric_13_1 SELEX + 168515469 168515481 6.0E-06 ATAAATGAATTAT 13
Creb5_bZIP_DBD_dimeric_12_1 SELEX - 168515434 168515445 5.0E-06 TATTACGTAACA 12
POU4F3_POU_DBD_monomeric_16_1 SELEX - 168515470 168515485 5.0E-06 AAAAATAATTCATTTA 16
POU4F3_POU_DBD_monomeric_16_1 SELEX + 168515473 168515488 1.0E-05 ATGAATTATTTTTAAA 16
PROP1_homeodomain_full_dimeric_11_1 SELEX + 168515470 168515480 4.0E-06 TAAATGAATTA 11
Sox17_HMG_DBD_dimeric_15_2 SELEX - 168515473 168515487 7.0E-06 TTAAAAATAATTCAT 15
MEF2A_MA0052.1 JASPAR + 168515478 168515487 7.0E-06 TTATTTTTAA 10
ALX3_homeodomain_full_dimeric_13_1 SELEX + 168515469 168515481 6.0E-06 ATAAATGAATTAT 13
ALX3_homeodomain_full_dimeric_13_1 SELEX - 168515469 168515481 7.0E-06 ATAATTCATTTAT 13
ATF7_bZIP_DBD_dimeric_14_1 SELEX + 168515433 168515446 9.0E-06 CTGTTACGTAATAA 14
ATF7_bZIP_DBD_dimeric_14_1 SELEX - 168515433 168515446 7.0E-06 TTATTACGTAACAG 14
DRGX_homeodomain_DBD_dimeric_13_1 SELEX + 168515469 168515481 6.0E-06 ATAAATGAATTAT 13
Alx4_homeodomain_DBD_dimeric_13_1 SELEX + 168515469 168515481 4.0E-06 ATAAATGAATTAT 13
Alx4_homeodomain_DBD_dimeric_13_1 SELEX - 168515469 168515481 8.0E-06 ATAATTCATTTAT 13
Gata1_MA0035.2 JASPAR - 168515398 168515408 1.0E-05 AGAGATAACAA 11
Mycn_MA0104.2 JASPAR + 168510306 168510315 8.0E-06 CCCACGTGGC 10
NFIL3_bZIP_DBD_dimeric_12_1 SELEX + 168515434 168515445 1.0E-06 TGTTACGTAATA 12
NFIL3_bZIP_DBD_dimeric_12_1 SELEX - 168515434 168515445 0.0E+00 TATTACGTAACA 12
Msx3_homeodomain_DBD_dimeric_18_1 SELEX + 168515443 168515460 1.0E-06 ATAATTGCTCAACAATTA 18
Msx3_homeodomain_DBD_dimeric_18_1 SELEX - 168515444 168515461 0.0E+00 CTAATTGTTGAGCAATTA 18
Msx3_homeodomain_DBD_dimeric_18_1 SELEX - 168515455 168515472 4.0E-06 TTATTTAAAAACTAATTG 18
VENTX_homeodomain_DBD_dimeric_21_1 SELEX + 168515441 168515461 1.0E-06 TAATAATTGCTCAACAATTAG 21
VENTX_homeodomain_DBD_dimeric_21_1 SELEX - 168515443 168515463 4.0E-06 AACTAATTGTTGAGCAATTAT 21
PRRX1_homeodomain_full_dimeric_11_1 SELEX + 168515470 168515480 8.0E-06 TAAATGAATTA 11
Uncx_homeodomain_DBD_dimeric_13_1 SELEX + 168515469 168515481 3.0E-06 ATAAATGAATTAT 13
EN1_homeodomain_full_dimeric_14_1 SELEX + 168515444 168515457 6.0E-06 TAATTGCTCAACAA 14
POU3F1_POU_DBD_monomeric_12_2 SELEX + 168515473 168515484 3.0E-06 ATGAATTATTTT 12
POU3F1_POU_DBD_monomeric_12_2 SELEX - 168515474 168515485 8.0E-06 AAAAATAATTCA 12
HLF_MA0043.1 JASPAR + 168515434 168515445 0.0E+00 TGTTACGTAATA 12
HLF_MA0043.1 JASPAR - 168515434 168515445 6.0E-06 TATTACGTAACA 12
GBX2_homeodomain_DBD_dimeric_14_1 SELEX + 168515444 168515457 3.0E-06 TAATTGCTCAACAA 14
GBX2_homeodomain_DBD_dimeric_14_1 SELEX - 168515444 168515457 1.0E-06 TTGTTGAGCAATTA 14
REST_MA0138.2 JASPAR - 168510274 168510294 1.0E-06 GTCAGGAGCATGGACAGGAAA 21
MSX1_homeodomain_DBD_dimeric_18_1 SELEX + 168515443 168515460 2.0E-06 ATAATTGCTCAACAATTA 18
MSX1_homeodomain_DBD_dimeric_18_1 SELEX - 168515444 168515461 0.0E+00 CTAATTGTTGAGCAATTA 18
MSX1_homeodomain_DBD_dimeric_18_1 SELEX - 168515455 168515472 2.0E-06 TTATTTAAAAACTAATTG 18
POU4F1_POU_DBD_monomeric_14_1 SELEX - 168515472 168515485 6.0E-06 AAAAATAATTCATT 14
HMX1_homeodomain_DBD_monomeric_11_1 SELEX - 168515441 168515451 7.0E-06 AGCAATTATTA 11
V_CEBPG_Q6_M00622 TRANSFAC - 168515461 168515473 2.0E-06 TTTATTTAAAAAC 13
V_TST1_02_M01316 TRANSFAC + 168515464 168515480 8.0E-06 TTTAAATAAATGAATTA 17
V_TST1_02_M01316 TRANSFAC - 168515467 168515483 1.0E-06 AAATAATTCATTTATTT 17
V_TST1_02_M01316 TRANSFAC + 168515468 168515484 4.0E-06 AATAAATGAATTATTTT 17
V_TST1_02_M01316 TRANSFAC - 168515471 168515487 9.0E-06 TTAAAAATAATTCATTT 17
V_DBX1_01_M01483 TRANSFAC + 168515455 168515471 5.0E-06 CAATTAGTTTTTAAATA 17
V_DBX1_01_M01483 TRANSFAC + 168515459 168515475 4.0E-06 TAGTTTTTAAATAAATG 17
V_DBX1_01_M01483 TRANSFAC - 168515459 168515475 2.0E-06 CATTTATTTAAAAACTA 17
V_DBX1_01_M01483 TRANSFAC + 168515463 168515479 1.0E-05 TTTTAAATAAATGAATT 17
V_DBX1_01_M01483 TRANSFAC - 168515463 168515479 5.0E-06 AATTCATTTATTTAAAA 17
V_DBX1_01_M01483 TRANSFAC - 168515464 168515480 6.0E-06 TAATTCATTTATTTAAA 17
V_DBX1_01_M01483 TRANSFAC + 168515467 168515483 7.0E-06 AAATAAATGAATTATTT 17
V_DBX1_01_M01483 TRANSFAC + 168515471 168515487 4.0E-06 AAATGAATTATTTTTAA 17
V_FREAC7_01_M00293 TRANSFAC + 168515464 168515479 5.0E-06 TTTAAATAAATGAATT 16
V_POU3F3_01_M03090 TRANSFAC + 168515468 168515484 9.0E-06 AATAAATGAATTATTTT 17
V_AR_02_M00953 TRANSFAC + 168515313 168515339 8.0E-06 CAACGAATCTCATTGTGTTCTCCTACT 27
V_GATA2_02_M00348 TRANSFAC - 168515399 168515408 2.0E-06 AGAGATAACA 10
V_MAX_Q6_M01830 TRANSFAC - 168510307 168510318 7.0E-06 CAAGCCACGTGG 12
V_NRSF_Q4_M01028 TRANSFAC + 168510275 168510293 4.0E-06 TTCCTGTCCATGCTCCTGA 19
V_HMGIY_Q3_M01010 TRANSFAC - 168515465 168515479 3.0E-06 AATTCATTTATTTAA 15
V_HMGIY_Q3_M01010 TRANSFAC + 168515471 168515485 8.0E-06 AAATGAATTATTTTT 15
V_MMEF2_Q6_M00405 TRANSFAC - 168515476 168515491 0.0E+00 CGTTTTAAAAATAATT 16
V_PROP1_01_M01294 TRANSFAC - 168515470 168515480 2.0E-06 TAATTCATTTA 11
V_MEF2_02_M00231 TRANSFAC - 168515473 168515494 1.0E-06 TGGCGTTTTAAAAATAATTCAT 22
V_OCTAMER_01_M01324 TRANSFAC + 168515468 168515484 9.0E-06 AATAAATGAATTATTTT 17
V_ISL2_01_M01328 TRANSFAC - 168515467 168515482 1.0E-06 AATAATTCATTTATTT 16
V_ISL2_01_M01328 TRANSFAC + 168515469 168515484 9.0E-06 ATAAATGAATTATTTT 16
V_POU1F1_Q6_M00744 TRANSFAC + 168515473 168515482 4.0E-06 ATGAATTATT 10
V_P50P50_Q3_M01223 TRANSFAC - 168515387 168515399 6.0E-06 AAGGGAATCTCCT 13
V_HFH4_01_M00742 TRANSFAC - 168515466 168515478 2.0E-06 ATTCATTTATTTA 13
V_DLX2_01_M01468 TRANSFAC + 168515440 168515455 1.0E-05 GTAATAATTGCTCAAC 16
V_LHX3_01_M01471 TRANSFAC - 168515460 168515476 9.0E-06 TCATTTATTTAAAAACT 17
V_SOX21_03_M02803 TRANSFAC + 168515473 168515488 2.0E-06 ATGAATTATTTTTAAA 16
V_SOX21_03_M02803 TRANSFAC - 168515473 168515488 4.0E-06 TTTAAAAATAATTCAT 16
V_MEF2A_Q6_M02024 TRANSFAC - 168515462 168515471 4.0E-06 TATTTAAAAA 10
V_MEF2A_Q6_M02024 TRANSFAC + 168515479 168515488 1.0E-06 TATTTTTAAA 10
V_ELF4_04_M02850 TRANSFAC - 168515473 168515489 6.0E-06 TTTTAAAAATAATTCAT 17
V_ELF4_04_M02850 TRANSFAC - 168515474 168515490 4.0E-06 GTTTTAAAAATAATTCA 17
V_ELF4_04_M02850 TRANSFAC - 168515475 168515491 7.0E-06 CGTTTTAAAAATAATTC 17
V_SOX13_03_M02797 TRANSFAC - 168515472 168515487 4.0E-06 TTAAAAATAATTCATT 16
V_SOX7_03_M02807 TRANSFAC + 168515446 168515467 1.0E-06 ATTGCTCAACAATTAGTTTTTA 22
V_SOX7_03_M02807 TRANSFAC - 168515468 168515489 4.0E-06 TTTTAAAAATAATTCATTTATT 22
V_FOXA2_02_M02853 TRANSFAC - 168515394 168515408 1.0E-05 AGAGATAACAAGGGA 15
V_POU3F2_01_M00463 TRANSFAC + 168515465 168515478 9.0E-06 TTAAATAAATGAAT 14
V_DBX2_01_M01360 TRANSFAC + 168515465 168515480 1.0E-06 TTAAATAAATGAATTA 16
V_LMX1_01_M01409 TRANSFAC - 168515460 168515476 2.0E-06 TCATTTATTTAAAAACT 17
V_E4BP4_01_M00045 TRANSFAC + 168515434 168515445 2.0E-06 TGTTACGTAATA 12
V_E4BP4_01_M00045 TRANSFAC - 168515434 168515445 1.0E-06 TATTACGTAACA 12
V_GMEB1_03_M02761 TRANSFAC + 168515432 168515448 2.0E-06 CCTGTTACGTAATAATT 17
V_RSRFC4_Q2_M00407 TRANSFAC - 168515474 168515490 2.0E-06 GTTTTAAAAATAATTCA 17
V_AMEF2_Q6_M00403 TRANSFAC - 168515474 168515491 0.0E+00 CGTTTTAAAAATAATTCA 18
V_NFKB_Q6_M00194 TRANSFAC - 168515386 168515399 3.0E-06 AAGGGAATCTCCTA 14
V_LHX2_01_M01325 TRANSFAC - 168515449 168515465 4.0E-06 AAAACTAATTGTTGAGC 17
V_HNF1_Q6_01_M01011 TRANSFAC - 168515457 168515477 8.0E-06 TTCATTTATTTAAAAACTAAT 21
V_MEF2_03_M00232 TRANSFAC - 168515473 168515494 3.0E-06 TGGCGTTTTAAAAATAATTCAT 22
V_SOX18_03_M02801 TRANSFAC + 168515473 168515488 4.0E-06 ATGAATTATTTTTAAA 16
V_REST_01_M01256 TRANSFAC + 168510270 168510291 5.0E-06 TGGATTTCCTGTCCATGCTCCT 22
V_OCT1_04_M00138 TRANSFAC - 168515456 168515478 2.0E-06 ATTCATTTATTTAAAAACTAATT 23
V_OCT1_08_M01354 TRANSFAC + 168515465 168515480 1.0E-05 TTAAATAAATGAATTA 16
V_HBP1_03_M02762 TRANSFAC + 168515466 168515481 2.0E-06 TAAATAAATGAATTAT 16
V_PIT1_01_M01465 TRANSFAC - 168515467 168515483 4.0E-06 AAATAATTCATTTATTT 17
V_PIT1_01_M01465 TRANSFAC + 168515468 168515484 5.0E-06 AATAAATGAATTATTTT 17
V_GATA1_09_M02254 TRANSFAC - 168515398 168515408 1.0E-05 AGAGATAACAA 11
V_NCX_02_M01420 TRANSFAC - 168515459 168515475 1.0E-06 CATTTATTTAAAAACTA 17
V_NCX_02_M01420 TRANSFAC + 168515467 168515483 4.0E-06 AAATAAATGAATTATTT 17
V_NCX_02_M01420 TRANSFAC + 168515471 168515487 7.0E-06 AAATGAATTATTTTTAA 17
V_ARID3A_04_M02735 TRANSFAC - 168515460 168515476 3.0E-06 TCATTTATTTAAAAACT 17
V_ARID3A_04_M02735 TRANSFAC + 168515461 168515477 2.0E-06 GTTTTTAAATAAATGAA 17
V_MYCN_01_M02259 TRANSFAC + 168510306 168510315 8.0E-06 CCCACGTGGC 10
V_TBP_06_M02814 TRANSFAC + 168515460 168515475 3.0E-06 AGTTTTTAAATAAATG 16
V_TBP_06_M02814 TRANSFAC - 168515462 168515477 6.0E-06 TTCATTTATTTAAAAA 16
V_LIM1_01_M01418 TRANSFAC - 168515460 168515476 6.0E-06 TCATTTATTTAAAAACT 17
V_VBP_01_M00228 TRANSFAC + 168515435 168515444 1.0E-06 GTTACGTAAT 10
V_SOX15_03_M02799 TRANSFAC + 168515448 168515464 3.0E-06 TGCTCAACAATTAGTTT 17
V_SOX15_03_M02799 TRANSFAC - 168515471 168515487 7.0E-06 TTAAAAATAATTCATTT 17
V_BRN4_01_M01473 TRANSFAC - 168515467 168515483 3.0E-06 AAATAATTCATTTATTT 17
V_BRN4_01_M01473 TRANSFAC + 168515468 168515484 2.0E-06 AATAAATGAATTATTTT 17
V_CEBPA_01_M00116 TRANSFAC + 168515444 168515457 6.0E-06 TAATTGCTCAACAA 14
V_GATA3_02_M00350 TRANSFAC - 168515399 168515408 2.0E-06 AGAGATAACA 10
V_MSX2_01_M01393 TRANSFAC + 168515449 168515465 9.0E-06 GCTCAACAATTAGTTTT 17
V_ATF1_03_M02738 TRANSFAC - 168515432 168515447 8.0E-06 ATTATTACGTAACAGG 16
V_TCF7_04_M02921 TRANSFAC - 168515478 168515492 4.0E-06 GCGTTTTAAAAATAA 15
V_MSX1_02_M01412 TRANSFAC - 168515451 168515466 6.0E-06 AAAAACTAATTGTTGA 16
V_LMX1B_01_M01363 TRANSFAC + 168515460 168515476 3.0E-06 AGTTTTTAAATAAATGA 17
V_BARX2_01_M01431 TRANSFAC + 168515451 168515466 3.0E-06 TCAACAATTAGTTTTT 16
V_REST_02_M02256 TRANSFAC - 168510274 168510294 1.0E-06 GTCAGGAGCATGGACAGGAAA 21
V_RSRFC4_01_M00026 TRANSFAC + 168515475 168515490 3.0E-06 GAATTATTTTTAAAAC 16
V_BBX_03_M02739 TRANSFAC + 168515466 168515480 0.0E+00 TAAATAAATGAATTA 15
V_BBX_03_M02739 TRANSFAC - 168515466 168515480 1.0E-06 TAATTCATTTATTTA 15
V_SOX21_04_M02907 TRANSFAC - 168515447 168515463 3.0E-06 AACTAATTGTTGAGCAA 17
V_CREBP1_01_M00040 TRANSFAC + 168515436 168515443 7.0E-06 TTACGTAA 8
V_CREBP1_01_M00040 TRANSFAC - 168515436 168515443 7.0E-06 TTACGTAA 8
V_SOX8_03_M02808 TRANSFAC + 168515471 168515487 0.0E+00 AAATGAATTATTTTTAA 17
V_GATA2_03_M00349 TRANSFAC - 168515399 168515408 2.0E-06 AGAGATAACA 10
V_FOXJ2_01_M00422 TRANSFAC + 168515463 168515480 5.0E-06 TTTTAAATAAATGAATTA 18
V_SATB1_01_M01232 TRANSFAC - 168515478 168515489 6.0E-06 TTTTAAAAATAA 12
V_HLF_01_M00260 TRANSFAC + 168515435 168515444 0.0E+00 GTTACGTAAT 10
V_SOX1_03_M02802 TRANSFAC - 168515468 168515483 0.0E+00 AAATAATTCATTTATT 16
V_HOMEZ_01_M01429 TRANSFAC + 168515453 168515469 8.0E-06 AACAATTAGTTTTTAAA 17
V_SRY_05_M02917 TRANSFAC + 168515447 168515463 9.0E-06 TTGCTCAACAATTAGTT 17
V_MEF2_01_M00006 TRANSFAC - 168515474 168515489 1.0E-06 TTTTAAAAATAATTCA 16
V_HMEF2_Q6_M00406 TRANSFAC - 168515474 168515489 0.0E+00 TTTTAAAAATAATTCA 16
V_LHX5_01_M01353 TRANSFAC - 168515460 168515476 7.0E-06 TCATTTATTTAAAAACT 17
V_SOX5_07_M02909 TRANSFAC - 168515448 168515464 7.0E-06 AAACTAATTGTTGAGCA 17
V_SOX5_07_M02909 TRANSFAC + 168515471 168515487 5.0E-06 AAATGAATTATTTTTAA 17
V_BARX1_01_M01340 TRANSFAC - 168515449 168515464 8.0E-06 AAACTAATTGTTGAGC 16
V_BARX1_01_M01340 TRANSFAC + 168515451 168515466 8.0E-06 TCAACAATTAGTTTTT 16
V_LTF_Q6_M01692 TRANSFAC + 168515417 168515425 6.0E-06 GGCACTTGC 9
V_CEBPE_01_M01772 TRANSFAC + 168515435 168515444 7.0E-06 GTTACGTAAT 10
V_CEBPE_01_M01772 TRANSFAC - 168515435 168515444 7.0E-06 ATTACGTAAC 10
V_GLIS2_04_M02863 TRANSFAC + 168515477 168515490 3.0E-06 ATTATTTTTAAAAC 14
V_GBX1_01_M01371 TRANSFAC + 168515449 168515465 7.0E-06 GCTCAACAATTAGTTTT 17
V_SOX14_03_M02798 TRANSFAC + 168515473 168515488 5.0E-06 ATGAATTATTTTTAAA 16
V_SOX14_03_M02798 TRANSFAC - 168515473 168515488 8.0E-06 TTTAAAAATAATTCAT 16
V_CEBPA_Q6_M01866 TRANSFAC - 168515445 168515457 3.0E-06 TTGTTGAGCAATT 13
V_GATA1_06_M00347 TRANSFAC - 168515399 168515408 8.0E-06 AGAGATAACA 10
Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns.
Developed at the Institute for Systems Biology in the Baliga Lab.
A Django site.   Powered by PostgreSQL