Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

SUPT6H Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 6830 suppressor of Ty 6 homolog (S. cerevisiae) chr17 + 26984301 - 26989801 26989301 Transcription Factor Binding Sites   Download all TFBS in the SUPT6H promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints PKNOX1_MEIS_DBD_dimeric_12_1 SELEX + 26989093 26989104 8.0E-06 TGACAGCTGCCT 12 LHX6_homeodomain_full_dimeric_16_1 SELEX + 26984973 26984988 4.0E-06 CAATGAGTCGTAATTG 16 LHX6_homeodomain_full_dimeric_16_1 SELEX - 26984973 26984988 5.0E-06 CAATTACGACTCATTG 16 PDX1_homeodomain_DBD_dimeric_18_1 SELEX + 26984972 26984989 7.0E-06 GCAATGAGTCGTAATTGT 18 PDX1_homeodomain_DBD_dimeric_18_1 SELEX - 26984972 26984989 7.0E-06 ACAATTACGACTCATTGC 18 TGIF2_MEIS_DBD_dimeric_12_1 SELEX + 26989093 26989104 7.0E-06 TGACAGCTGCCT 12 TGIF2_MEIS_DBD_dimeric_12_1 SELEX - 26989093 26989104 9.0E-06 AGGCAGCTGTCA 12 TCF7L1_HMG_full_monomeric_12_1 SELEX + 26989860 26989871 4.0E-06 AAAGATCGAAGG 12 THRB_nuclearreceptor_DBD_dimeric_18_1 SELEX + 26984950 26984967 7.0E-06 TTGAGCCCAGGAGGTCAA 18 POU6F2_POU_DBD_dimeric_16_1 SELEX + 26985035 26985050 9.0E-06 TTCATGACTTTATTAT 16 SREBF2_bHLH_DBD_dimeric_10_1 SELEX - 26989699 26989708 5.0E-06 ATCACCTGAT 10 SP4_C2H2_full_monomeric_17_1 SELEX + 26988678 26988694 2.0E-06 TAGGCCCCGCCCCTCCA 17 Srebf1_bHLH_DBD_dimeric_10_1 SELEX - 26989699 26989708 4.0E-06 ATCACCTGAT 10 Lhx3_MA0135.1 JASPAR - 26984878 26984890 1.0E-06 TGATTAATTTTTT 13 Tcf7_HMG_DBD_monomeric_12_1 SELEX + 26989860 26989871 5.0E-06 AAAGATCGAAGG 12 HNF1B_homeodomain_full_dimeric_13_1 SELEX + 26984876 26984888 9.0E-06 GCAAAAAATTAAT 13 ELK1_MA0028.1 JASPAR + 26989202 26989211 5.0E-06 GAGCCGGAAA 10 Evi1_MA0029.1 JASPAR - 26989275 26989288 7.0E-06 GGGAAAAGATAGTA 14 DUXA_homeodomain_DBD_dimeric_13_1 SELEX + 26984879 26984891 4.0E-06 AAAAATTAATCAG 13 Myf_MA0055.1 JASPAR + 26988868 26988879 7.0E-06 CAACAACAGCAG 12 ETV6_ETS_full_dimeric_15_1 SELEX + 26988945 26988959 0.0E+00 CCGGAACCGGAAGCT 15 RREB1_MA0073.1 JASPAR + 26988856 26988875 3.0E-06 CCACAAACCCCCCAACAACA 20 RREB1_MA0073.1 JASPAR + 26988860 26988879 6.0E-06 AAACCCCCCAACAACAGCAG 20 RREB1_MA0073.1 JASPAR + 26988863 26988882 2.0E-06 CCCCCCAACAACAGCAGAGG 20 HNF1A_MA0046.1 JASPAR - 26984876 26984889 5.0E-06 GATTAATTTTTTGC 14 V_MEIS1BHOXA9_02_M00421 TRANSFAC - 26984980 26984993 3.0E-06 TGACACAATTACGA 14 V_AREB6_01_M00412 TRANSFAC - 26989355 26989367 1.0E-06 ACTTTACCTGTCT 13 V_TST1_02_M01316 TRANSFAC + 26984878 26984894 7.0E-06 AAAAAATTAATCAGGTG 17 V_ELK1_04_M01165 TRANSFAC + 26988949 26988959 5.0E-06 AACCGGAAGCT 11 V_PREP1_01_M01459 TRANSFAC - 26989089 26989104 9.0E-06 AGGCAGCTGTCACTGA 16 V_EVI1_05_M00082 TRANSFAC - 26985044 26985054 5.0E-06 AGATATAATAA 11 V_E2F4_Q6_M02090 TRANSFAC + 26989157 26989166 1.0E-05 GCGGGAGAGA 10 V_DMRT3_01_M01148 TRANSFAC - 26985010 26985024 7.0E-06 AGTTGGCTACATTTA 15 V_EVI1_04_M00081 TRANSFAC - 26985045 26985059 2.0E-06 AAAAAAGATATAATA 15 V_MAFB_05_M02775 TRANSFAC + 26989799 26989815 9.0E-06 CATATTGCTGAATAATA 17 V_HOXA3_01_M00395 TRANSFAC + 26984981 26984989 4.0E-06 CGTAATTGT 9 V_GATA3_03_M00351 TRANSFAC - 26985047 26985056 2.0E-06 AAAGATATAA 10 V_HOXA13_02_M01297 TRANSFAC - 26989013 26989021 3.0E-06 AAATAAACC 9 V_EBOX_Q6_01_M01034 TRANSFAC - 26989396 26989405 6.0E-06 CCACCTGACT 10 V_MAFB_03_M02879 TRANSFAC + 26984871 26984885 1.0E-06 AAGATGCAAAAAATT 15 V_SP1_Q6_01_M00931 TRANSFAC - 26988681 26988690 4.0E-06 GGGGCGGGGC 10 V_OTX_Q1_M01117 TRANSFAC - 26984882 26984889 5.0E-06 GATTAATT 8 V_CEBP_Q2_M00190 TRANSFAC + 26989800 26989813 3.0E-06 ATATTGCTGAATAA 14 V_PU1_Q4_M01172 TRANSFAC - 26988976 26988994 3.0E-06 CTTCTTCACTTCCTTCTCT 19 V_PAX6_02_M01391 TRANSFAC - 26984875 26984890 1.0E-06 TGATTAATTTTTTGCA 16 V_HMGA2_01_M01300 TRANSFAC + 26989800 26989814 1.0E-06 ATATTGCTGAATAAT 15 V_GC_01_M00255 TRANSFAC - 26988679 26988692 2.0E-06 GAGGGGCGGGGCCT 14 V_MYF_01_M01302 TRANSFAC + 26988868 26988879 7.0E-06 CAACAACAGCAG 12 V_TGIF_02_M01346 TRANSFAC + 26989088 26989104 7.0E-06 CTCAGTGACAGCTGCCT 17 V_HNF3G_Q4_M02015 TRANSFAC + 26989714 26989721 7.0E-06 TGTTTGTT 8 V_SREBP1_01_M00220 TRANSFAC - 26989699 26989709 2.0E-06 GATCACCTGAT 11 V_HNF1_Q6_M00790 TRANSFAC - 26984873 26984890 2.0E-06 TGATTAATTTTTTGCATC 18 V_HOXA3_07_M02869 TRANSFAC - 26989006 26989019 7.0E-06 ATAAACCATAAAGA 14 V_SP1_Q6_M00196 TRANSFAC - 26988680 26988692 1.0E-06 GAGGGGCGGGGCC 13 V_MAZ_Q6_01_M02023 TRANSFAC + 26989507 26989520 7.0E-06 GGGGGAGGAAAGCG 14 V_HNF3_Q6_M00791 TRANSFAC + 26989811 26989823 6.0E-06 TAATACAAATAGA 13 V_HNF3ALPHA_Q6_M00724 TRANSFAC + 26989714 26989724 3.0E-06 TGTTTGTTCTG 11 V_HNF3ALPHA_Q6_M00724 TRANSFAC - 26989811 26989821 4.0E-06 TATTTGTATTA 11 V_HNF1_Q6_01_M01011 TRANSFAC + 26984872 26984892 2.0E-06 AGATGCAAAAAATTAATCAGG 21 V_ZBTB7B_03_M02826 TRANSFAC + 26988860 26988874 4.0E-06 AAACCCCCCAACAAC 15 V_E4F1_Q6_01_M02091 TRANSFAC + 26989211 26989220 5.0E-06 ATGACGTAGC 10 V_GADP_01_M01258 TRANSFAC - 26989202 26989213 8.0E-06 CATTTCCGGCTC 12 V_OCT1_04_M00138 TRANSFAC + 26989805 26989827 8.0E-06 GCTGAATAATACAAATAGAACTT 23 V_RREB1_01_M00257 TRANSFAC + 26988856 26988869 3.0E-06 CCACAAACCCCCCA 14 V_KLF7_03_M02773 TRANSFAC + 26988678 26988693 8.0E-06 TAGGCCCCGCCCCTCC 16 V_TGIF1_01_M03111 TRANSFAC + 26989088 26989104 7.0E-06 CTCAGTGACAGCTGCCT 17 V_ELK1_01_M00007 TRANSFAC + 26988947 26988962 4.0E-06 GGAACCGGAAGCTAAT 16 V_SP4_Q5_M01273 TRANSFAC + 26988681 26988691 8.0E-06 GCCCCGCCCCT 11 V_SP4_Q5_M01273 TRANSFAC + 26988937 26988947 7.0E-06 GCCCCTCCCCG 11 V_MYOD_Q6_02_M02100 TRANSFAC - 26989093 26989101 4.0E-06 CAGCTGTCA 9 V_LBP9_01_M01592 TRANSFAC - 26989039 26989055 7.0E-06 CCAGGCTCAGCCGGTTT 17 V_POU5F1_01_M01307 TRANSFAC + 26984873 26984882 6.0E-06 GATGCAAAAA 10 V_EHF_06_M02745 TRANSFAC + 26989200 26989214 1.0E-05 GGGAGCCGGAAATGA 15 V_TAL1_01_M01591 TRANSFAC - 26988974 26988986 0.0E+00 CTTCCTTCTCTCC 13 V_PKNOX2_01_M01411 TRANSFAC - 26989089 26989104 5.0E-06 AGGCAGCTGTCACTGA 16 V_HNF1_01_M00132 TRANSFAC - 26984875 26984889 5.0E-06 GATTAATTTTTTGCA 15 V_CAAT_C_M00200 TRANSFAC - 26989643 26989667 3.0E-06 CCCAATCCTTTTGCGTGGCCCAGTT 25 V_LUN1_01_M00480 TRANSFAC + 26984914 26984930 9.0E-06 TCCCAGCTACTCAGGAC 17 V_TFIIA_Q6_M00707 TRANSFAC - 26985029 26985040 9.0E-06 CATGAAAGGAGC 12 V_TCF7_04_M02921 TRANSFAC + 26985042 26985056 9.0E-06 CTTTATTATATCTTT 15 V_MYB_Q3_M00773 TRANSFAC + 26984993 26985003 2.0E-06 ACTGCCAGTTA 11 V_MTATA_B_M00320 TRANSFAC + 26989635 26989651 7.0E-06 GTTTTTAAAACTGGGCC 17 V_FOX_Q2_M00809 TRANSFAC + 26989010 26989022 8.0E-06 TATGGTTTATTTG 13 V_SOX8_03_M02808 TRANSFAC - 26989804 26989820 7.0E-06 ATTTGTATTATTCAGCA 17 V_DMRT2_01_M01147 TRANSFAC - 26985010 26985025 1.0E-06 TAGTTGGCTACATTTA 16 V_HFH3_01_M00289 TRANSFAC - 26989812 26989824 9.0E-06 TTCTATTTGTATT 13 V_FOXJ2_01_M00422 TRANSFAC + 26989809 26989826 5.0E-06 AATAATACAAATAGAACT 18 V_E4F1_Q6_M00694 TRANSFAC - 26989211 26989220 8.0E-06 GCTACGTCAT 10 V_HNF3B_Q6_M02014 TRANSFAC + 26989713 26989721 1.0E-05 TTGTTTGTT 9 V_SP1_Q2_01_M00933 TRANSFAC + 26988682 26988691 7.0E-06 CCCCGCCCCT 10 V_LHX4_01_M01421 TRANSFAC + 26984880 26984896 6.0E-06 AAAATTAATCAGGTGTG 17 V_UF1H3BETA_Q6_M01068 TRANSFAC + 26989246 26989259 2.0E-06 GGCGGCGGAGGGGC 14 V_SP1_Q4_01_M00932 TRANSFAC - 26988680 26988692 2.0E-06 GAGGGGCGGGGCC 13 V_HNF1A_01_M02162 TRANSFAC - 26984876 26984889 5.0E-06 GATTAATTTTTTGC 14 V_PAX6_01_M00097 TRANSFAC + 26989004 26989024 3.0E-06 GATCTTTATGGTTTATTTGAC 21

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.