Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

SPRR1B Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 6699 small proline-rich protein 1B chr1 + 152998678 - 153004178 153003678 Transcription Factor Binding Sites   Download all TFBS in the SPRR1B promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints NFE2_bZIP_DBD_dimeric_11_1 SELEX - 153005619 153005629 5.0E-06 CATGACTCACT 11 CTCF_MA0139.1 JASPAR - 153005553 153005571 2.0E-06 CAGCCTCTAGGTGGCATTA 19 FOXO4_forkhead_DBD_dimeric_14_1 SELEX + 153006146 153006159 8.0E-06 ATCAACATGTTTCA 14 NEUROD2_bHLH_full_dimeric_10_1 SELEX + 153001430 153001439 8.0E-06 GCCATATGGC 10 NEUROD2_bHLH_full_dimeric_10_1 SELEX - 153001430 153001439 8.0E-06 GCCATATGGC 10 FOXO3_MA0157.1 JASPAR + 153003440 153003447 7.0E-06 TGTAAACA 8 GRHL1_CP2_full_dimeric_12_1 SELEX + 153007915 153007926 7.0E-06 GAAACCTGTTTT 12 GRHL1_CP2_full_dimeric_12_1 SELEX - 153007915 153007926 2.0E-06 AAAACAGGTTTC 12 HLF_bZIP_full_dimeric_12_1 SELEX - 153005546 153005557 6.0E-06 CATTACACAACC 12 STAT1_MA0137.2 JASPAR + 153003433 153003447 4.0E-06 CCCTTCCTGTAAACA 15 SCRT2_C2H2_DBD_monomeric_13_1 SELEX + 153003540 153003552 3.0E-06 AGTCAACAGGTGG 13 TEAD1_TEA_full_monomeric_10_1 SELEX - 153003587 153003596 3.0E-06 TACATTCCTT 10 LEF1_HMG_DBD_monomeric_15_1 SELEX + 153005317 153005331 1.0E-06 TAAGATGAAAGCAAA 15 FOXI1_MA0042.1 JASPAR + 153005730 153005741 4.0E-06 TCCTGTTTATTT 12 NFAT5_NFAT_DBD_dimeric_14_1 SELEX - 153006639 153006652 5.0E-06 GTGGAAAGTAACTT 14 NFATC1_NFAT_full_dimeric_20_1 SELEX - 153006634 153006653 2.0E-06 AGTGGAAAGTAACTTTTACT 20 CTCF_C2H2_full_monomeric_17_1 SELEX + 153005554 153005570 9.0E-06 AATGCCACCTAGAGGCT 17 Tcf7_HMG_DBD_monomeric_12_1 SELEX + 153005317 153005328 1.0E-05 TAAGATGAAAGC 12 SCRT1_C2H2_DBD_monomeric_15_1 SELEX + 153003540 153003554 1.0E-06 AGTCAACAGGTGGGT 15 NFIL3_bZIP_DBD_dimeric_12_1 SELEX - 153005546 153005557 9.0E-06 CATTACACAACC 12 PRDM1_C2H2_full_monomeric-or-dimeric_15_1 SELEX - 153005362 153005376 3.0E-06 TGGAATTGAAAGTGA 15 JDP2_bZIP_full_dimeric_9_1 SELEX - 153005620 153005628 7.0E-06 ATGACTCAC 9 JDP2_bZIP_full_dimeric_9_1 SELEX - 153007905 153007913 7.0E-06 ATGACTCAC 9 GRHL1_CP2_DBD_dimeric_10_1 SELEX + 153007916 153007925 7.0E-06 AAACCTGTTT 10 GRHL1_CP2_DBD_dimeric_10_1 SELEX - 153007916 153007925 8.0E-06 AAACAGGTTT 10 FOXO3_forkhead_full_dimeric_14_1 SELEX - 153006146 153006159 6.0E-06 TGAAACATGTTGAT 14 TEAD4_TEA_DBD_monomeric_10_1 SELEX - 153003587 153003596 4.0E-06 TACATTCCTT 10 TP53_MA0106.1 JASPAR - 153007867 153007886 8.0E-06 GGAAACATGTCTGGGAAGGC 20 IRF3_IRF_full_trimeric_21_1 SELEX - 153005357 153005377 4.0E-06 GTGGAATTGAAAGTGAATTTA 21 FOXO6_forkhead_DBD_dimeric_14_1 SELEX - 153006146 153006159 4.0E-06 TGAAACATGTTGAT 14 FOXO1_forkhead_DBD_dimeric_14_1 SELEX + 153006146 153006159 3.0E-06 ATCAACATGTTTCA 14 V_FOXP1_01_M00987 TRANSFAC - 153005987 153006006 0.0E+00 ATATGTGTGTATGTGTGTTT 20 V_FOXP1_01_M00987 TRANSFAC - 153005991 153006010 3.0E-06 TTGTATATGTGTGTATGTGT 20 V_FOXP1_01_M00987 TRANSFAC - 153005995 153006014 5.0E-06 GTGGTTGTATATGTGTGTAT 20 V_FOXP1_01_M00987 TRANSFAC - 153006003 153006022 2.0E-06 TTGTGTGTGTGGTTGTATAT 20 V_HNF3B_01_M00131 TRANSFAC - 153005324 153005338 4.0E-06 TGAATCATTTGCTTT 15 V_DBX1_01_M01483 TRANSFAC - 153007922 153007938 1.0E-05 TAATTTATAAAGAAAAC 17 V_FREAC7_01_M00293 TRANSFAC - 153005729 153005744 1.0E-06 TTGAAATAAACAGGAA 16 V_TCF3_01_M01594 TRANSFAC - 153005898 153005910 1.0E-06 CCTTTGTTCTGTT 13 V_LEF1_04_M02774 TRANSFAC - 153005316 153005332 9.0E-06 ATTTGCTTTCATCTTAA 17 V_CDX2_Q5_01_M01659 TRANSFAC + 153007928 153007938 1.0E-05 TTTATAAATTA 11 V_APOLYA_B_M00310 TRANSFAC - 153005726 153005740 3.0E-06 AATAAACAGGAATTG 15 V_EVI1_05_M00082 TRANSFAC + 153006169 153006179 7.0E-06 AAACAAGATAG 11 V_FOXO3_02_M02270 TRANSFAC + 153003440 153003447 7.0E-06 TGTAAACA 8 V_AREB6_03_M00414 TRANSFAC + 153003448 153003459 4.0E-06 CTACACCTGGGA 12 V_ZEC_01_M01081 TRANSFAC - 153005802 153005814 9.0E-06 AAATCTAGGTTGT 13 V_EVI1_04_M00081 TRANSFAC + 153006164 153006178 2.0E-06 AAATTAAACAAGATA 15 V_BCL6_01_M01183 TRANSFAC + 153003734 153003749 3.0E-06 TTACTTGGAACTCTTT 16 V_ETS_B_M00340 TRANSFAC - 153007877 153007890 1.0E-06 TACAGGAAACATGT 14 V_ZTA_Q2_M00711 TRANSFAC + 153005658 153005670 1.0E-06 TGACTCTGACTCA 13 V_EGR_Q6_M00807 TRANSFAC - 153005510 153005520 6.0E-06 GTGGGGGCAGC 11 V_IRF2_Q6_M01882 TRANSFAC - 153005356 153005371 2.0E-06 TTGAAAGTGAATTTAA 16 V_IRF2_Q6_M01882 TRANSFAC - 153005362 153005377 1.0E-06 GTGGAATTGAAAGTGA 16 V_CEBP_01_M00159 TRANSFAC - 153005809 153005821 7.0E-06 TGTTTGGAAATCT 13 V_POU1F1_Q6_M00744 TRANSFAC + 153003646 153003655 6.0E-06 ATGCATAAAA 10 V_GABPA_04_M02858 TRANSFAC - 153003470 153003485 1.0E-05 GCTTTATCCCCCTGAA 16 V_PRX2_Q2_M02115 TRANSFAC + 153006162 153006170 2.0E-06 TCAAATTAA 9 V_CACCCBINDINGFACTOR_Q6_M00721 TRANSFAC + 153003543 153003558 0.0E+00 CAACAGGTGGGTGAGG 16 V_CACCCBINDINGFACTOR_Q6_M00721 TRANSFAC + 153005493 153005508 8.0E-06 CATTAGGAGGGTGAAG 16 V_ZFP281_05_M02935 TRANSFAC + 153005344 153005360 1.0E-06 CTTATACCCCCATTAAA 17 V_SOX21_03_M02803 TRANSFAC - 153007956 153007971 1.0E-05 TTGCATTACTATAAAG 16 V_BRN2_01_M00145 TRANSFAC + 153003643 153003658 5.0E-06 TCCATGCATAAAAAGC 16 V_TCFAP2E_04_M02926 TRANSFAC - 153005734 153005747 7.0E-06 TACTTGAAATAAAC 14 V_TCFAP2E_04_M02926 TRANSFAC + 153006542 153006555 4.0E-06 AAGCAGAAAAAAAA 14 V_TCFAP2E_04_M02926 TRANSFAC + 153006543 153006556 6.0E-06 AGCAGAAAAAAAAG 14 V_LDSPOLYA_B_M00317 TRANSFAC + 153005381 153005396 8.0E-06 TGACTGTGTGTCATTG 16 V_P53_02_M00272 TRANSFAC + 153007875 153007884 2.0E-06 AGACATGTTT 10 V_P53_02_M00272 TRANSFAC - 153007875 153007884 9.0E-06 AAACATGTCT 10 V_CEBPB_01_M00109 TRANSFAC - 153005809 153005822 4.0E-06 GTGTTTGGAAATCT 14 V_BARBIE_01_M00238 TRANSFAC + 153003650 153003664 5.0E-06 ATAAAAAGCCAGTTG 15 V_BACH1_01_M00495 TRANSFAC + 153005617 153005631 3.0E-06 TCAGTGAGTCATGCT 15 V_BACH1_01_M00495 TRANSFAC + 153007902 153007916 8.0E-06 ACTGTGAGTCATTGA 15 V_TCF3_04_M02816 TRANSFAC + 153005316 153005332 2.0E-06 TTAAGATGAAAGCAAAT 17 V_CEBPE_Q6_M01868 TRANSFAC + 153005807 153005820 5.0E-06 CTAGATTTCCAAAC 14 V_POLY_C_M00212 TRANSFAC + 153005354 153005371 5.0E-06 CATTAAATTCACTTTCAA 18 V_CEBPD_Q6_M00621 TRANSFAC - 153001474 153001485 8.0E-06 AATTTCCTCATC 12 V_AP1_Q4_M00188 TRANSFAC - 153005856 153005866 3.0E-06 AATGACTAACT 11 V_FOXK1_04_M02856 TRANSFAC + 153006596 153006610 9.0E-06 GCTATAACAACACCC 15 V_IRF_Q6_M00772 TRANSFAC + 153005361 153005375 0.0E+00 TTCACTTTCAATTCC 15 V_ZBTB7B_03_M02826 TRANSFAC + 153005347 153005361 7.0E-06 ATACCCCCATTAAAT 15 V_ELF5_01_M01197 TRANSFAC + 153001475 153001485 6.0E-06 ATGAGGAAATT 11 V_JUNDM2_04_M02876 TRANSFAC - 153007902 153007917 6.0E-06 TTCAATGACTCACAGT 16 V_OCT1_04_M00138 TRANSFAC + 153006152 153006174 4.0E-06 ATGTTTCAAGTCAAATTAAACAA 23 V_MEF2_04_M00233 TRANSFAC - 153007949 153007970 5.0E-06 TGCATTACTATAAAGAACTACC 22 V_DAX1_01_M01248 TRANSFAC + 153005253 153005272 5.0E-06 GAAGCTGAAGGTCTTAGTAC 20 V_TCF7_03_M02817 TRANSFAC + 153005316 153005332 0.0E+00 TTAAGATGAAAGCAAAT 17 V_HFH1_01_M00129 TRANSFAC + 153005730 153005741 3.0E-06 TCCTGTTTATTT 12 V_HB24_01_M01399 TRANSFAC + 153007926 153007940 7.0E-06 TCTTTATAAATTACC 15 V_ISGF3G_03_M02771 TRANSFAC - 153005362 153005376 9.0E-06 TGGAATTGAAAGTGA 15 V_TBP_06_M02814 TRANSFAC - 153007924 153007939 7.0E-06 GTAATTTATAAAGAAA 16 V_CTCF_02_M01259 TRANSFAC - 153005555 153005574 4.0E-06 CAACAGCCTCTAGGTGGCAT 20 V_OCT4_02_M01124 TRANSFAC + 153005360 153005374 1.0E-05 ATTCACTTTCAATTC 15 V_SOX11_03_M02795 TRANSFAC + 153005898 153005914 2.0E-06 AACAGAACAAAGGGGAT 17 V_CTCF_01_M01200 TRANSFAC - 153005553 153005572 5.0E-06 ACAGCCTCTAGGTGGCATTA 20 V_BLIMP1_Q6_M01066 TRANSFAC - 153005356 153005371 2.0E-06 TTGAAAGTGAATTTAA 16 V_AP1_Q2_01_M00924 TRANSFAC - 153003533 153003544 9.0E-06 TGACTCAACTTT 12 V_AP1_Q2_01_M00924 TRANSFAC - 153007901 153007912 1.0E-06 TGACTCACAGTT 12 V_IRX5_01_M01472 TRANSFAC - 153006144 153006160 1.0E-05 TTGAAACATGTTGATAC 17 V_IRX5_01_M01472 TRANSFAC + 153006145 153006161 8.0E-06 TATCAACATGTTTCAAG 17 V_PAX8_B_M00328 TRANSFAC - 153005370 153005387 6.0E-06 ACAGTCAAGAGTGGAATT 18 V_PAX8_B_M00328 TRANSFAC - 153005777 153005794 6.0E-06 AGAGAAATGAGTGAGAAG 18 V_EVI1_06_M00011 TRANSFAC + 153006171 153006179 4.0E-06 ACAAGATAG 9 V_AP1_Q4_01_M00926 TRANSFAC + 153005621 153005628 1.0E-05 TGAGTCAT 8 V_AP1_Q4_01_M00926 TRANSFAC + 153007906 153007913 1.0E-05 TGAGTCAT 8 V_CETS1P54_03_M01078 TRANSFAC - 153007877 153007892 9.0E-06 TGTACAGGAAACATGT 16 V_HOXD9_Q2_M01834 TRANSFAC + 153001382 153001391 4.0E-06 AGACATAAAA 10 V_GATA4_Q3_M00632 TRANSFAC - 153005790 153005801 1.0E-06 AGATATCAGAGA 12 V_GCNF_01_M00526 TRANSFAC - 153001477 153001494 1.0E-05 AGAAAGCTCAATTTCCTC 18 V_GCNF_01_M00526 TRANSFAC + 153005355 153005372 8.0E-06 ATTAAATTCACTTTCAAT 18 V_TBP_01_M00471 TRANSFAC + 153007930 153007937 8.0E-06 TATAAATT 8 V_TAL1_01_M01591 TRANSFAC + 153005681 153005693 5.0E-06 TTGCCTTCTCTCC 13 V_FRA1_Q5_M01267 TRANSFAC + 153005621 153005628 1.0E-05 TGAGTCAT 8 V_FRA1_Q5_M01267 TRANSFAC + 153007906 153007913 1.0E-05 TGAGTCAT 8 V_P53_05_M01655 TRANSFAC + 153007865 153007884 8.0E-06 AGGCCTTCCCAGACATGTTT 20 V_STAT1STAT1_Q3_M01212 TRANSFAC - 153003434 153003446 1.0E-05 GTTTACAGGAAGG 13 V_STAT1STAT1_Q3_M01212 TRANSFAC + 153006154 153006166 8.0E-06 GTTTCAAGTCAAA 13 V_P53_01_M00034 TRANSFAC + 153007865 153007884 4.0E-06 AGGCCTTCCCAGACATGTTT 20 V_P53_01_M00034 TRANSFAC - 153007865 153007884 3.0E-06 AAACATGTCTGGGAAGGCCT 20 V_SMAD_Q6_01_M00974 TRANSFAC + 153003499 153003509 4.0E-06 TTGTCAGACAG 11 V_IRX2_01_M01405 TRANSFAC - 153006144 153006160 9.0E-06 TTGAAACATGTTGATAC 17 V_SOX4_01_M01308 TRANSFAC + 153005903 153005910 1.0E-05 AACAAAGG 8 V_SOX2_Q6_M01272 TRANSFAC - 153005899 153005914 2.0E-06 ATCCCCTTTGTTCTGT 16 V_PIT1_Q6_M00802 TRANSFAC + 153005727 153005744 1.0E-06 AATTCCTGTTTATTTCAA 18 V_FREAC4_01_M00292 TRANSFAC + 153003536 153003551 8.0E-06 GTTGAGTCAACAGGTG 16 V_HMEF2_Q6_M00406 TRANSFAC + 153007927 153007942 1.0E-06 CTTTATAAATTACCCA 16 V_HMEF2_Q6_M00406 TRANSFAC - 153007950 153007965 5.0E-06 TACTATAAAGAACTAC 16 V_CEBP_Q2_01_M00912 TRANSFAC - 153005545 153005556 8.0E-06 ATTACACAACCT 12 V_TAACC_B_M00331 TRANSFAC + 153003492 153003514 9.0E-06 GACATCCTTGTCAGACAGCAAGT 23 V_LTF_Q6_M01692 TRANSFAC - 153003509 153003517 6.0E-06 GGCACTTGC 9 V_TCF3_05_M02920 TRANSFAC + 153006543 153006557 4.0E-06 AGCAGAAAAAAAAGT 15 V_STAT1_05_M01260 TRANSFAC - 153003426 153003447 1.0E-05 TGTTTACAGGAAGGGTGGTGTG 22 V_SMAD1_01_M01590 TRANSFAC + 153005900 153005911 3.0E-06 CAGAACAAAGGG 12 V_PPARA_01_M00242 TRANSFAC + 153005894 153005913 1.0E-05 CTGAAACAGAACAAAGGGGA 20 V_NANOG_02_M01247 TRANSFAC + 153005896 153005915 2.0E-06 GAAACAGAACAAAGGGGATT 20 V_OTX3_01_M01403 TRANSFAC - 153005667 153005683 5.0E-06 CAATCAGGATTAGTGAG 17

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.