Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

SPP2 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 6694 secreted phosphoprotein 2, 24kDa chr2 + 234954345 - 234959845 234959345 Transcription Factor Binding Sites   Download all TFBS in the SPP2 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints FOXB1_forkhead_DBD_dimeric_18_1 SELEX + 234957704 234957721 9.0E-06 AAAGAAAACATTTATGCA 18 Sox1_HMG_DBD_dimeric_14_1 SELEX + 234959681 234959694 2.0E-06 TGAATTCCCAGTCA 14 Sox1_HMG_DBD_dimeric_14_1 SELEX - 234959681 234959694 2.0E-06 TGACTGGGAATTCA 14 MSX2_homeodomain_DBD_dimeric_18_1 SELEX + 234956862 234956879 0.0E+00 CCAATTGTTGAGCAATTA 18 MSX2_homeodomain_DBD_dimeric_18_1 SELEX + 234956873 234956890 3.0E-06 GCAATTAATTGCCAAGTA 18 SOX10_HMG_full_dimeric_14_1 SELEX + 234959681 234959694 2.0E-06 TGAATTCCCAGTCA 14 SPIC_ETS_full_monomeric_14_1 SELEX + 234959733 234959746 3.0E-06 AAAAAGAGTAAGTG 14 SOX21_HMG_DBD_dimeric_13_2 SELEX - 234956837 234956849 8.0E-06 AGAATTCAATTCA 13 ESR2_MA0258.1 JASPAR - 234956237 234956254 2.0E-06 CCAGGTCATGATGCTCTC 18 FOXC2_forkhead_DBD_monomeric_12_1 SELEX + 234957704 234957715 7.0E-06 AAAGAAAACATT 12 SOX8_HMG_full_dimeric_17_1 SELEX + 234956830 234956846 2.0E-06 TATCTATTGAATTGAAT 17 EWSR1-FLI1_MA0149.1 JASPAR + 234956042 234956059 8.0E-06 GTGGGGAAGGGAGGATGG 18 SOX7_HMG_full_dimeric_17_2 SELEX + 234956835 234956851 5.0E-06 ATTGAATTGAATTCTTA 17 SOX7_HMG_full_dimeric_17_2 SELEX - 234956835 234956851 9.0E-06 TAAGAATTCAATTCAAT 17 STAT1_MA0137.2 JASPAR - 234960104 234960118 3.0E-06 TATTTCCAGTAAGTA 15 SOX8_HMG_DBD_dimeric_14_1 SELEX + 234959681 234959694 5.0E-06 TGAATTCCCAGTCA 14 FOXD2_forkhead_DBD_dimeric_14_1 SELEX + 234957706 234957719 1.0E-06 AGAAAACATTTATG 14 FOXD2_forkhead_DBD_dimeric_14_1 SELEX - 234957706 234957719 4.0E-06 CATAAATGTTTTCT 14 SPIB_ETS_DBD_monomeric_14_1 SELEX + 234959733 234959746 7.0E-06 AAAAAGAGTAAGTG 14 HMX3_homeodomain_DBD_monomeric_11_1 SELEX + 234956872 234956882 7.0E-06 AGCAATTAATT 11 FOXD3_forkhead_DBD_dimeric_14_1 SELEX + 234957706 234957719 2.0E-06 AGAAAACATTTATG 14 FOXD3_forkhead_DBD_dimeric_14_1 SELEX - 234957706 234957719 7.0E-06 CATAAATGTTTTCT 14 POU6F2_POU_DBD_dimeric_16_1 SELEX + 234959719 234959734 7.0E-06 TTCAGAAGCTCATTAA 16 Sox17_HMG_DBD_dimeric_15_2 SELEX + 234956836 234956850 2.0E-06 TTGAATTGAATTCTT 15 Sox17_HMG_DBD_dimeric_15_2 SELEX - 234956836 234956850 2.0E-06 AAGAATTCAATTCAA 15 SOX2_HMG_full_dimeric_15_1 SELEX + 234956836 234956850 4.0E-06 TTGAATTGAATTCTT 15 SOX2_HMG_full_dimeric_15_1 SELEX - 234956836 234956850 6.0E-06 AAGAATTCAATTCAA 15 Pou2f2_POU_DBD_dimeric_14_1 SELEX - 234956157 234956170 1.0E-05 CAGGCATATTTAAA 14 FOXC1_forkhead_DBD_dimeric_14_1 SELEX + 234957706 234957719 6.0E-06 AGAAAACATTTATG 14 FOXC1_forkhead_DBD_dimeric_14_1 SELEX - 234957706 234957719 7.0E-06 CATAAATGTTTTCT 14 NRL_bZIP_DBD_monomeric_11_1 SELEX + 234956175 234956185 8.0E-06 AAAGTGCTGAT 11 Msx3_homeodomain_DBD_dimeric_18_1 SELEX + 234956862 234956879 0.0E+00 CCAATTGTTGAGCAATTA 18 Msx3_homeodomain_DBD_dimeric_18_1 SELEX + 234956873 234956890 6.0E-06 GCAATTAATTGCCAAGTA 18 VENTX_homeodomain_DBD_dimeric_21_1 SELEX - 234956862 234956882 5.0E-06 AATTAATTGCTCAACAATTGG 21 POU1F1_POU_DBD_monomeric_17_1 SELEX - 234956223 234956239 7.0E-06 CTCATGAGTATTTACTG 17 HESX1_homeodomain_DBD_dimeric_15_1 SELEX - 234956877 234956891 1.0E-06 GTACTTGGCAATTAA 15 Foxd3_MA0041.1 JASPAR - 234957705 234957716 3.0E-06 AAATGTTTTCTT 12 LHX9_homeodomain_DBD_dimeric_13_1 SELEX + 234956878 234956890 2.0E-06 TAATTGCCAAGTA 13 EN1_homeodomain_full_dimeric_14_1 SELEX - 234956866 234956879 6.0E-06 TAATTGCTCAACAA 14 FOXC2_forkhead_DBD_dimeric_14_1 SELEX + 234957706 234957719 6.0E-06 AGAAAACATTTATG 14 FOXC2_forkhead_DBD_dimeric_14_1 SELEX - 234957706 234957719 9.0E-06 CATAAATGTTTTCT 14 Hltf_MA0109.1 JASPAR + 234957709 234957718 1.0E-05 AAACATTTAT 10 POU6F2_POU_full_monomeric_10_1 SELEX + 234959726 234959735 8.0E-06 GCTCATTAAA 10 HOXB13_homeodomain_DBD_monomeric_11_1 SELEX + 234959726 234959736 1.0E-05 GCTCATTAAAA 11 SOX18_HMG_full_dimeric_15_3 SELEX - 234956836 234956850 1.0E-06 AAGAATTCAATTCAA 15 SOX18_HMG_full_dimeric_15_3 SELEX + 234960260 234960274 8.0E-06 AAAAATATCCTTCAA 15 NR3C1_MA0113.1 JASPAR + 234956237 234956254 4.0E-06 GAGAGCATCATGACCTGG 18 Sox3_HMG_DBD_dimeric_17_3 SELEX + 234956835 234956851 9.0E-06 ATTGAATTGAATTCTTA 17 Sox3_HMG_DBD_dimeric_17_3 SELEX - 234956835 234956851 7.0E-06 TAAGAATTCAATTCAAT 17 HMX2_homeodomain_DBD_monomeric_11_1 SELEX + 234956872 234956882 6.0E-06 AGCAATTAATT 11 GBX2_homeodomain_DBD_dimeric_14_1 SELEX + 234956866 234956879 1.0E-06 TTGTTGAGCAATTA 14 GBX2_homeodomain_DBD_dimeric_14_1 SELEX - 234956866 234956879 3.0E-06 TAATTGCTCAACAA 14 SPI1_ETS_full_monomeric_14_1 SELEX + 234959733 234959746 4.0E-06 AAAAAGAGTAAGTG 14 EMX1_homeodomain_DBD_dimeric_14_1 SELEX - 234960157 234960170 8.0E-06 CTATTACCAAATTG 14 MSX1_homeodomain_DBD_dimeric_18_1 SELEX + 234956862 234956879 0.0E+00 CCAATTGTTGAGCAATTA 18 MSX1_homeodomain_DBD_dimeric_18_1 SELEX + 234956873 234956890 1.0E-06 GCAATTAATTGCCAAGTA 18 Nobox_MA0125.1 JASPAR - 234961120 234961127 7.0E-06 TAATTGGT 8 Foxj3_forkhead_DBD_dimeric_13_1 SELEX + 234960283 234960295 8.0E-06 AGAAACATAAGCA 13 NFIA_NFI_full_monomeric_10_1 SELEX + 234956880 234956889 5.0E-06 ATTGCCAAGT 10 Sox1_HMG_DBD_dimeric_15_2 SELEX + 234956836 234956850 2.0E-06 TTGAATTGAATTCTT 15 Sox1_HMG_DBD_dimeric_15_2 SELEX - 234956836 234956850 5.0E-06 AAGAATTCAATTCAA 15 HMX1_homeodomain_DBD_monomeric_11_1 SELEX + 234956872 234956882 1.0E-06 AGCAATTAATT 11 V_DMRT4_01_M01149 TRANSFAC + 234956936 234956948 5.0E-06 AATGTGTCAACTT 13 V_RUSH1A_02_M01107 TRANSFAC + 234957709 234957718 1.0E-05 AAACATTTAT 10 V_CEBPG_Q6_M00622 TRANSFAC + 234959727 234959739 5.0E-06 CTCATTAAAAAGA 13 V_ER_Q6_02_M00959 TRANSFAC - 234956243 234956253 8.0E-06 CAGGTCATGAT 11 V_AP1_Q2_M00173 TRANSFAC + 234960224 234960234 3.0E-06 AATGACTAAGT 11 V_MSX3_01_M01341 TRANSFAC + 234961116 234961131 9.0E-06 GAGAACCAATTACTGA 16 V_CEBP_Q3_M00770 TRANSFAC + 234960157 234960168 4.0E-06 CAATTTGGTAAT 12 V_HMGIY_Q3_M01010 TRANSFAC - 234960134 234960148 7.0E-06 AGGTGAATTTCTTTG 15 V_EVI1_04_M00081 TRANSFAC + 234960252 234960266 1.0E-06 AGAAATGTAAAAATA 15 V_FOXD3_01_M00130 TRANSFAC - 234957705 234957716 3.0E-06 AAATGTTTTCTT 12 V_BCL6_01_M01183 TRANSFAC - 234960250 234960265 3.0E-06 ATTTTTACATTTCTTT 16 V_BCL6_01_M01183 TRANSFAC - 234960260 234960275 1.0E-06 TTTGAAGGATATTTTT 16 V_ERR3_Q2_01_M02094 TRANSFAC + 234956027 234956039 7.0E-06 ACTCAAGGACACC 13 V_MAFB_05_M02775 TRANSFAC + 234956174 234956190 9.0E-06 CAAAGTGCTGATGAGTA 17 V_MMEF2_Q6_M00405 TRANSFAC + 234956154 234956169 6.0E-06 GATTTTAAATATGCCT 16 V_STAT_Q6_M00777 TRANSFAC + 234956889 234956901 2.0E-06 TACTCTTCTGAGA 13 V_SPDEF_04_M02915 TRANSFAC + 234960260 234960275 3.0E-06 AAAAATATCCTTCAAA 16 V_MAFB_03_M02879 TRANSFAC + 234960253 234960267 5.0E-06 GAAATGTAAAAATAT 15 V_YY1_Q6_M00793 TRANSFAC + 234961204 234961212 7.0E-06 GCCATCTTG 9 V_HNF3_Q6_01_M01012 TRANSFAC - 234957701 234957718 6.0E-06 ATAAATGTTTTCTTTTGA 18 V_STAT6_01_M00494 TRANSFAC - 234960111 234960118 7.0E-06 TATTTCCA 8 V_NR3C1_01_M02219 TRANSFAC + 234956237 234956254 4.0E-06 GAGAGCATCATGACCTGG 18 V_TCFAP2E_04_M02926 TRANSFAC + 234957698 234957711 1.0E-05 TTCTCAAAAGAAAA 14 V_PAX6_02_M01391 TRANSFAC + 234956870 234956885 8.0E-06 TGAGCAATTAATTGCC 16 V_LDSPOLYA_B_M00317 TRANSFAC - 234960201 234960216 8.0E-06 CAAGTGATTACTCTTT 16 V_DLX5_01_M01388 TRANSFAC - 234961116 234961131 2.0E-06 TCAGTAATTGGTTCTC 16 V_HOXC13_01_M01317 TRANSFAC + 234959723 234959738 8.0E-06 GAAGCTCATTAAAAAG 16 V_MEF2A_Q6_M02024 TRANSFAC - 234956155 234956164 9.0E-06 TATTTAAAAT 10 V_MEF2A_Q6_M02024 TRANSFAC - 234960257 234960266 5.0E-06 TATTTTTACA 10 V_HNF1_C_M00206 TRANSFAC - 234956870 234956886 5.0E-06 TGGCAATTAATTGCTCA 17 V_AP1_Q6_M00174 TRANSFAC + 234960224 234960234 5.0E-06 AATGACTAAGT 11 V_SOX7_03_M02807 TRANSFAC - 234956856 234956877 9.0E-06 ATTGCTCAACAATTGGTAACCA 22 V_TCF3_04_M02816 TRANSFAC + 234960265 234960281 1.0E-06 TATCCTTCAAAGGAAAT 17 V_EN1_02_M01365 TRANSFAC + 234961116 234961131 5.0E-06 GAGAACCAATTACTGA 16 V_FREAC3_01_M00291 TRANSFAC + 234956220 234956235 2.0E-06 AGGCAGTAAATACTCA 16 V_ZFP105_03_M02827 TRANSFAC - 234956901 234956915 1.0E-06 ATTAAATAACAAGCT 15 V_SOX7_04_M02911 TRANSFAC + 234960161 234960182 3.0E-06 TTGGTAATAGTCTGTTTCCTCT 22 V_NKX61_01_M00424 TRANSFAC - 234959725 234959737 6.0E-06 TTTTTAATGAGCT 13 V_AP1_Q4_M00188 TRANSFAC + 234960224 234960234 1.0E-06 AATGACTAAGT 11 V_OCT1_04_M00138 TRANSFAC + 234960248 234960270 5.0E-06 GGAAAGAAATGTAAAAATATCCT 23 V_HMX1_02_M01481 TRANSFAC + 234956869 234956885 6.0E-06 TTGAGCAATTAATTGCC 17 V_TCF7_03_M02817 TRANSFAC + 234960265 234960281 1.0E-06 TATCCTTCAAAGGAAAT 17 V_EN2_01_M01455 TRANSFAC + 234961117 234961133 9.0E-06 AGAACCAATTACTGACA 17 V_ELF1_Q6_M00746 TRANSFAC - 234960311 234960322 9.0E-06 GGAACAGGAAGA 12 V_SOX15_03_M02799 TRANSFAC - 234956859 234956875 8.0E-06 TGCTCAACAATTGGTAA 17 V_POU6F1_02_M01462 TRANSFAC - 234959722 234959738 5.0E-06 CTTTTTAATGAGCTTCT 17 V_CEBPA_01_M00116 TRANSFAC - 234956866 234956879 6.0E-06 TAATTGCTCAACAA 14 V_IPF1_05_M01255 TRANSFAC + 234959726 234959737 1.0E-06 GCTCATTAAAAA 12 V_AREB6_02_M00413 TRANSFAC + 234960141 234960152 4.0E-06 ATTCACCTTTCC 12 V_MSX2_01_M01393 TRANSFAC + 234961116 234961132 8.0E-06 GAGAACCAATTACTGAC 17 V_NCX_01_M00484 TRANSFAC - 234961121 234961130 1.0E-05 CAGTAATTGG 10 V_NKX61_02_M01469 TRANSFAC - 234956870 234956885 3.0E-06 GGCAATTAATTGCTCA 16 V_NKX61_02_M01469 TRANSFAC + 234956872 234956887 9.0E-06 AGCAATTAATTGCCAA 16 V_AIRE_01_M00999 TRANSFAC - 234961106 234961131 1.0E-06 TCAGTAATTGGTTCTCTTGGGATCTA 26 V_MSX1_02_M01412 TRANSFAC - 234956870 234956885 6.0E-06 GGCAATTAATTGCTCA 16 V_TCF4_Q5_M00671 TRANSFAC - 234960270 234960277 1.0E-05 CCTTTGAA 8 V_MSX1_01_M00394 TRANSFAC - 234961122 234961130 7.0E-06 CAGTAATTG 9 V_STAT1STAT1_Q3_M01212 TRANSFAC - 234960105 234960117 7.0E-06 ATTTCCAGTAAGT 13 V_BARX2_01_M01431 TRANSFAC - 234956872 234956887 9.0E-06 TTGGCAATTAATTGCT 16 V_BARX2_01_M01431 TRANSFAC - 234961116 234961131 8.0E-06 TCAGTAATTGGTTCTC 16 V_BARX2_01_M01431 TRANSFAC + 234961118 234961133 6.0E-06 GAACCAATTACTGACA 16 V_PLZF_02_M01075 TRANSFAC - 234960113 234960141 5.0E-06 TTTCTTTGACTCAAAAGCCAGATTATTTC 29 V_SIX4_01_M01374 TRANSFAC + 234961124 234961140 5.0E-06 ATTACTGACACCGTGGA 17 V_SOX21_04_M02907 TRANSFAC + 234956860 234956876 4.0E-06 TACCAATTGTTGAGCAA 17 V_HSF_Q6_M00641 TRANSFAC - 234956086 234956098 8.0E-06 GTCCAGCAGTTTC 13 V_DMRT2_01_M01147 TRANSFAC + 234957702 234957717 4.0E-06 CAAAAGAAAACATTTA 16 V_SRF_06_M02916 TRANSFAC + 234957700 234957716 7.0E-06 CTCAAAAGAAAACATTT 17 V_NKX11_01_M01334 TRANSFAC + 234961117 234961133 7.0E-06 AGAACCAATTACTGACA 17 V_POU6F1_03_M01479 TRANSFAC - 234959722 234959738 2.0E-06 CTTTTTAATGAGCTTCT 17 V_EWSR1FLI1_01_M02252 TRANSFAC + 234956042 234956059 8.0E-06 GTGGGGAAGGGAGGATGG 18 V_HOXD8_01_M01432 TRANSFAC + 234956870 234956886 2.0E-06 TGAGCAATTAATTGCCA 17 V_HOXD8_01_M01432 TRANSFAC - 234956871 234956887 1.0E-06 TTGGCAATTAATTGCTC 17 V_HOXB3_01_M01330 TRANSFAC + 234961117 234961133 8.0E-06 AGAACCAATTACTGACA 17 V_SOX1_03_M02802 TRANSFAC + 234956830 234956845 9.0E-06 TATCTATTGAATTGAA 16 V_SOX1_03_M02802 TRANSFAC - 234956831 234956846 0.0E+00 ATTCAATTCAATAGAT 16 V_SOX1_03_M02802 TRANSFAC + 234956835 234956850 2.0E-06 ATTGAATTGAATTCTT 16 V_SOX1_03_M02802 TRANSFAC - 234956836 234956851 4.0E-06 TAAGAATTCAATTCAA 16 V_NKX12_01_M01427 TRANSFAC - 234961117 234961133 5.0E-06 TGTCAGTAATTGGTTCT 17 V_SRY_05_M02917 TRANSFAC - 234956860 234956876 7.0E-06 TTGCTCAACAATTGGTA 17 V_MEF2_01_M00006 TRANSFAC + 234960256 234960271 7.0E-06 ATGTAAAAATATCCTT 16 V_HMEF2_Q6_M00406 TRANSFAC + 234960256 234960271 9.0E-06 ATGTAAAAATATCCTT 16 V_BRN3C_01_M01408 TRANSFAC - 234959724 234959739 4.0E-06 TCTTTTTAATGAGCTT 16 V_HOXA10_01_M01464 TRANSFAC - 234956872 234956887 3.0E-06 TTGGCAATTAATTGCT 16 V_BARX1_01_M01340 TRANSFAC - 234956868 234956883 8.0E-06 CAATTAATTGCTCAAC 16 V_DEC_Q1_M00997 TRANSFAC - 234960207 234960219 8.0E-06 GCCCAAGTGATTA 13 V_STAT1_05_M01260 TRANSFAC + 234960104 234960125 3.0E-06 TACTTACTGGAAATAATCTGGC 22 V_ESR2_01_M02377 TRANSFAC - 234956237 234956254 2.0E-06 CCAGGTCATGATGCTCTC 18 V_CEBPA_Q6_M01866 TRANSFAC + 234956866 234956878 3.0E-06 TTGTTGAGCAATT 13

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.