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SOX1 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS Motifs 6656 SRY (sex determining region Y)-box 1 chr13 + 112716912 - 112722412 112721912 Sox1_HMG_DBD_dimeric_15_1 Sox1_HMG_DBD_dimeric_15_2 Sox1_HMG_DBD_dimeric_13_1 Sox1_HMG_DBD_dimeric_14_1 V_SOX1_04_M02906 V_SOX1_03_M02802 Transcription Factor Binding Sites   Download all TFBS in the SOX1 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints Hoxd9_homeodomain_DBD_monomeric_10_1 SELEX - 112721189 112721198 9.0E-06 GCCATTAAAT 10 KLF16_C2H2_DBD_monomeric_11_1 SELEX + 112717439 112717449 1.0E-05 GCCCCGCCCCC 11 EWSR1-FLI1_MA0149.1 JASPAR - 112721041 112721058 6.0E-06 GCAAAGCAGGAAGGAGGG 18 EWSR1-FLI1_MA0149.1 JASPAR - 112721045 112721062 5.0E-06 GGGAGCAAAGCAGGAAGG 18 EWSR1-FLI1_MA0149.1 JASPAR - 112721062 112721079 0.0E+00 GGAGGGGAGGAAGGAGGG 18 EWSR1-FLI1_MA0149.1 JASPAR - 112721066 112721083 0.0E+00 GGGAGGAGGGGAGGAAGG 18 NFYA_MA0060.1 JASPAR - 112721165 112721180 8.0E-06 CGCGGCCAATGGGAGC 16 ISX_homeodomain_DBD_dimeric_13_1 SELEX + 112726035 112726047 3.0E-06 TTAGTCCAATTAT 13 SP1_MA0079.2 JASPAR + 112717440 112717449 7.0E-06 CCCCGCCCCC 10 SP1_MA0079.2 JASPAR + 112721073 112721082 9.0E-06 CCCCTCCTCC 10 ZSCAN4_C2H2_full_monomeric_15_1 SELEX + 112724547 112724561 3.0E-06 CACACACACAGAAAT 15 PRDM1_C2H2_full_monomeric-or-dimeric_15_1 SELEX - 112720759 112720773 6.0E-06 GGAAGGGGAAAGTTG 15 PLAG1_MA0163.1 JASPAR - 112721403 112721416 9.0E-06 GAGGCGCAGGGGGG 14 V_HOXA9_01_M01351 TRANSFAC - 112721185 112721201 6.0E-06 GCTGCCATTAAATGAGC 17 V_APOLYA_B_M00310 TRANSFAC - 112717541 112717555 7.0E-06 AAGAAAGAGCCATTC 15 V_OCT1_Q5_01_M00930 TRANSFAC - 112721142 112721152 2.0E-06 TGATTTGCATG 11 V_ZFP740_03_M02834 TRANSFAC + 112721413 112721428 4.0E-06 CCTCCCCCCCCCCGCC 16 V_NKX25_Q6_M02108 TRANSFAC - 112726701 112726711 7.0E-06 TTCACTTGAAG 11 V_SP1_03_M02281 TRANSFAC + 112717440 112717449 7.0E-06 CCCCGCCCCC 10 V_SP1_03_M02281 TRANSFAC + 112721073 112721082 9.0E-06 CCCCTCCTCC 10 V_OCT_C_M00210 TRANSFAC - 112721141 112721153 8.0E-06 GTGATTTGCATGG 13 V_SP1_02_M01303 TRANSFAC - 112720862 112720872 5.0E-06 GGGGTGGGGGG 11 V_PU1_Q4_M01172 TRANSFAC + 112717545 112717563 9.0E-06 GGCTCTTTCTTCTTCTCTC 19 V_ZNF219_01_M01122 TRANSFAC + 112720860 112720871 2.0E-06 CTCCCCCCACCC 12 V_ZNF219_01_M01122 TRANSFAC + 112721414 112721425 2.0E-06 CTCCCCCCCCCC 12 V_FOXA2_02_M02853 TRANSFAC - 112723582 112723596 2.0E-06 ATTTATAACAAATGC 15 V_TEF_Q6_M00672 TRANSFAC - 112726044 112726055 7.0E-06 TTGCAAACATAA 12 V_SOX8_04_M02912 TRANSFAC - 112723585 112723598 7.0E-06 ACATTTATAACAAA 14 V_SOX1_04_M02906 TRANSFAC + 112724527 112724541 9.0E-06 AAATAATTGTGCTGG 15 V_KROX_Q6_M00982 TRANSFAC + 112717441 112717454 9.0E-06 CCCGCCCCCGCGCG 14 V_ZBP89_Q4_M01816 TRANSFAC + 112720858 112720867 6.0E-06 TCCTCCCCCC 10 V_ZBP89_Q4_M01816 TRANSFAC + 112721034 112721043 6.0E-06 TCCTCCCCCC 10 V_OLF1_01_M00261 TRANSFAC - 112720715 112720736 8.0E-06 CTCAGTTCCCCCGAGTGCTGAA 22 V_SP1_Q6_M00196 TRANSFAC - 112717438 112717450 2.0E-06 CGGGGGCGGGGCG 13 V_MAZ_Q6_01_M02023 TRANSFAC - 112717468 112717481 5.0E-06 GAGGGAGGGGAGCG 14 V_MAZ_Q6_01_M02023 TRANSFAC - 112717472 112717485 1.0E-05 CGAGGAGGGAGGGG 14 V_MAZ_Q6_01_M02023 TRANSFAC - 112721069 112721082 0.0E+00 GGAGGAGGGGAGGA 14 V_MAZ_Q6_01_M02023 TRANSFAC - 112721072 112721085 6.0E-06 CGGGGAGGAGGGGA 14 V_EGR1_Q6_M01873 TRANSFAC - 112717442 112717451 4.0E-06 GCGGGGGCGG 10 V_NKX25_Q5_M01043 TRANSFAC - 112726703 112726712 7.0E-06 TTTCACTTGA 10 V_HOX13_01_M00023 TRANSFAC - 112724517 112724546 5.0E-06 AGAATCCAGCACAATTATTTTGCCCGTTTT 30 V_OCT1_04_M00138 TRANSFAC - 112717530 112717552 7.0E-06 AAAGAGCCATTCAAATTGGAAGA 23 V_CTCF_01_M01200 TRANSFAC - 112721387 112721406 9.0E-06 GGGGCCTGCAGGGGGCGATT 20 V_SRF_03_M01304 TRANSFAC - 112720880 112720892 1.0E-05 GACTAAGAAAGGA 13 V_OCT1_B_M00342 TRANSFAC + 112721142 112721151 4.0E-06 CATGCAAATC 10 V_OCT_Q6_M00795 TRANSFAC - 112721142 112721152 2.0E-06 TGATTTGCATG 11 V_SP4_Q5_M01273 TRANSFAC + 112717434 112717444 7.0E-06 CCCCCGCCCCG 11 V_SP4_Q5_M01273 TRANSFAC + 112717439 112717449 1.0E-06 GCCCCGCCCCC 11 V_MYF6_04_M02885 TRANSFAC - 112721007 112721021 8.0E-06 GGTGACAGCCACACC 15 V_TAL1_01_M01591 TRANSFAC + 112717552 112717564 7.0E-06 TCTTCTTCTCTCT 13 V_CNOT3_01_M01253 TRANSFAC + 112722334 112722343 4.0E-06 GGCCGCGCCG 10 V_OCT1_Q6_M00195 TRANSFAC + 112721139 112721153 2.0E-06 CGCCATGCAAATCAC 15 V_MSX2_01_M01393 TRANSFAC + 112726035 112726051 9.0E-06 TTAGTCCAATTATGTTT 17 V_NFY_01_M00287 TRANSFAC - 112721165 112721180 1.0E-05 CGCGGCCAATGGGAGC 16 V_FPM315_01_M01587 TRANSFAC - 112721031 112721042 2.0E-06 GGGGGAGGAGGC 12 V_FPM315_01_M01587 TRANSFAC - 112721074 112721085 2.0E-06 CGGGGAGGAGGG 12 V_EGR1_06_M02744 TRANSFAC + 112717441 112717454 7.0E-06 CCCGCCCCCGCGCG 14 V_ZFP281_04_M02831 TRANSFAC + 112720856 112720870 4.0E-06 TTTCCTCCCCCCACC 15 V_EWSR1FLI1_01_M02252 TRANSFAC - 112721041 112721058 6.0E-06 GCAAAGCAGGAAGGAGGG 18 V_EWSR1FLI1_01_M02252 TRANSFAC - 112721045 112721062 5.0E-06 GGGAGCAAAGCAGGAAGG 18 V_EWSR1FLI1_01_M02252 TRANSFAC - 112721062 112721079 0.0E+00 GGAGGGGAGGAAGGAGGG 18 V_EWSR1FLI1_01_M02252 TRANSFAC - 112721066 112721083 0.0E+00 GGGAGGAGGGGAGGAAGG 18 V_SOX18_04_M02905 TRANSFAC - 112723588 112723603 3.0E-06 TTACTACATTTATAAC 16 V_SATB1_01_M01232 TRANSFAC + 112723583 112723594 7.0E-06 CATTTGTTATAA 12 V_SOX12_03_M02796 TRANSFAC + 112723583 112723596 3.0E-06 CATTTGTTATAAAT 14 V_SP1_Q2_01_M00933 TRANSFAC + 112717440 112717449 4.0E-06 CCCCGCCCCC 10 V_LHX4_01_M01421 TRANSFAC + 112726036 112726052 2.0E-06 TAGTCCAATTATGTTTG 17 V_UF1H3BETA_Q6_M01068 TRANSFAC - 112721415 112721428 5.0E-06 GGCGGGGGGGGGGA 14 V_SOX5_07_M02909 TRANSFAC + 112724526 112724542 1.0E-05 AAAATAATTGTGCTGGA 17 V_NFYA_Q5_M02106 TRANSFAC - 112721165 112721178 3.0E-06 CGGCCAATGGGAGC 14 V_SP1_Q4_01_M00932 TRANSFAC - 112717438 112717450 3.0E-06 CGGGGGCGGGGCG 13 V_CDPCR3_01_M00105 TRANSFAC + 112724551 112724565 4.0E-06 CACACAGAAATATCG 15 V_DTYPEPA_B_M00334 TRANSFAC - 112721189 112721198 2.0E-06 GCCATTAAAT 10

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.