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SNRPF Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 6636 small nuclear ribonucleoprotein polypeptide F chr12 + 96247708 - 96253208 96252708 Transcription Factor Binding Sites   Download all TFBS in the SNRPF promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints Rxrb_nuclearreceptor_DBD_dimeric_14_1 SELEX + 96252711 96252724 0.0E+00 GAGGTGAAAGGTCA 14 IRF7_IRF_DBD_dimeric_14_1 SELEX + 96251124 96251137 8.0E-06 TGAAAAATGAAAGT 14 SPIC_ETS_full_monomeric_14_1 SELEX + 96252419 96252432 8.0E-06 AAAAAGACAAAGTA 14 NR4A2_nuclearreceptor_full_monomeric_11_1 SELEX + 96252714 96252724 6.0E-06 GTGAAAGGTCA 11 RXRG_nuclearreceptor_full_dimeric_14_1 SELEX + 96252711 96252724 0.0E+00 GAGGTGAAAGGTCA 14 NR2F6_nuclearreceptor_full_dimeric_14_1 SELEX + 96252711 96252724 0.0E+00 GAGGTGAAAGGTCA 14 NFYA_MA0060.1 JASPAR + 96251158 96251173 3.0E-06 CGCAACCAATCAGACT 16 Pax4_MA0068.1 JASPAR + 96251128 96251157 9.0E-06 AAATGAAAGTACCTCTTATTGGTCCCCTCC 30 IRF1_MA0050.1 JASPAR + 96251126 96251137 1.0E-06 AAAAATGAAAGT 12 Esrra_nuclearreceptor_DBD_dimeric_17_1 SELEX + 96252708 96252724 4.0E-06 TGGGAGGTGAAAGGTCA 17 NR2F1_nuclearreceptor_DBD_dimeric_15_1 SELEX + 96252711 96252725 0.0E+00 GAGGTGAAAGGTCAT 15 ATF4_bZIP_DBD_dimeric_13_1 SELEX - 96254079 96254091 3.0E-06 GAGTGATGCAACA 13 Atf4_bZIP_DBD_dimeric_14_1 SELEX - 96254079 96254092 3.0E-06 AGAGTGATGCAACA 14 NR2C2_nuclearreceptor_DBD_dimeric_14_1 SELEX + 96252711 96252724 0.0E+00 GAGGTGAAAGGTCA 14 PRDM1_C2H2_full_monomeric-or-dimeric_15_1 SELEX + 96251125 96251139 1.0E-06 GAAAAATGAAAGTAC 15 HNF4A_MA0114.1 JASPAR + 96252712 96252724 5.0E-06 AGGTGAAAGGTCA 13 HNF4A_nuclearreceptor_full_dimeric_14_1 SELEX + 96252711 96252724 1.0E-06 GAGGTGAAAGGTCA 14 Sox2_MA0143.1 JASPAR - 96254038 96254052 1.0E-05 GCATTGTCAGTCAAA 15 RXRA_nuclearreceptor_full_dimeric_14_1 SELEX + 96252711 96252724 0.0E+00 GAGGTGAAAGGTCA 14 E2F2_E2F_DBD_dimeric_18_1 SELEX - 96252730 96252747 9.0E-06 GAAATGGCCGCCAAACAG 18 IRF2_MA0051.1 JASPAR + 96251125 96251142 6.0E-06 GAAAAATGAAAGTACCTC 18 V_E2F1_Q3_01_M00938 TRANSFAC - 96252728 96252743 9.0E-06 TGGCCGCCAAACAGGA 16 V_OBOX1_01_M01450 TRANSFAC - 96252427 96252443 2.0E-06 TAATGGGGATTTACTTT 17 V_MYB_03_M02883 TRANSFAC - 96251114 96251129 3.0E-06 TTTTCAACTGCCACGC 16 V_NFY_Q6_M00185 TRANSFAC + 96251160 96251170 6.0E-06 CAACCAATCAG 11 V_HOXA13_02_M01297 TRANSFAC - 96254022 96254030 7.0E-06 ATATAAAAC 9 V_CBF_02_M01080 TRANSFAC - 96253149 96253164 2.0E-06 TGGAGTGTGGTTAAGT 16 V_NR2F2_03_M02783 TRANSFAC + 96252713 96252728 6.0E-06 GGTGAAAGGTCATAGT 16 V_IRF_Q6_01_M00972 TRANSFAC + 96251126 96251136 1.0E-06 AAAAATGAAAG 11 V_IRF2_Q6_M01882 TRANSFAC + 96251124 96251139 0.0E+00 TGAAAAATGAAAGTAC 16 V_RFX4_03_M02789 TRANSFAC - 96252620 96252634 7.0E-06 TCTCCTAGCAACCAG 15 V_EAR2_Q2_M01728 TRANSFAC - 96252421 96252434 2.0E-06 TTTACTTTGTCTTT 14 V_IRF3_05_M02767 TRANSFAC - 96251711 96251724 5.0E-06 TAAAAACGGAACCA 14 V_HNF4A_03_M02220 TRANSFAC + 96252712 96252724 5.0E-06 AGGTGAAAGGTCA 13 V_PPAR_DR1_Q2_M00763 TRANSFAC - 96252712 96252724 1.0E-06 TGACCTTTCACCT 13 V_COUPTF_Q6_M01036 TRANSFAC - 96252707 96252729 2.0E-06 GACTATGACCTTTCACCTCCCAC 23 V_NFY_Q6_01_M00775 TRANSFAC + 96251157 96251169 5.0E-06 CCGCAACCAATCA 13 V_PPARGRXRA_01_M02262 TRANSFAC + 96252710 96252724 1.0E-06 GGAGGTGAAAGGTCA 15 V_NFY_C_M00209 TRANSFAC - 96251158 96251171 7.0E-06 TCTGATTGGTTGCG 14 V_DBP_Q6_01_M01872 TRANSFAC - 96254102 96254109 5.0E-06 TTATGTAA 8 V_DOBOX4_01_M01359 TRANSFAC + 96252427 96252443 6.0E-06 AAAGTAAATCCCCATTA 17 V_IRF2_01_M00063 TRANSFAC + 96251125 96251137 1.0E-06 GAAAAATGAAAGT 13 V_CEBPB_02_M00117 TRANSFAC + 96254078 96254091 7.0E-06 TTGTTGCATCACTC 14 V_IRF_Q6_M00772 TRANSFAC - 96251126 96251140 0.0E+00 GGTACTTTCATTTTT 15 V_OBOX2_01_M01364 TRANSFAC - 96252427 96252443 2.0E-06 TAATGGGGATTTACTTT 17 V_RFXDC2_03_M02790 TRANSFAC - 96252620 96252634 4.0E-06 TCTCCTAGCAACCAG 15 V_PPARG_03_M00528 TRANSFAC + 96252708 96252724 7.0E-06 TGGGAGGTGAAAGGTCA 17 V_SOX12_04_M02900 TRANSFAC + 96252419 96252434 1.0E-06 AAAAAGACAAAGTAAA 16 V_DAX1_01_M01248 TRANSFAC + 96252711 96252730 0.0E+00 GAGGTGAAAGGTCATAGTCC 20 V_RREB1_01_M00257 TRANSFAC + 96254065 96254078 3.0E-06 CCCCAAAACCACCT 14 V_PNR_01_M01650 TRANSFAC + 96252711 96252724 7.0E-06 GAGGTGAAAGGTCA 14 V_SMAD4_Q6_M00733 TRANSFAC + 96252637 96252651 4.0E-06 CTGGGCCAGCCATCT 15 V_TBP_06_M02814 TRANSFAC - 96254020 96254035 1.0E-06 CCCAAATATAAAACTA 16 V_SOX11_03_M02795 TRANSFAC + 96253283 96253299 1.0E-05 CTAAGAACAATGCAGAC 17 V_SOX9_B1_M00410 TRANSFAC + 96253284 96253297 5.0E-06 TAAGAACAATGCAG 14 V_ISGF4G_04_M02875 TRANSFAC - 96252725 96252738 4.0E-06 GCCAAACAGGACTA 14 V_ICSBP_Q6_M00699 TRANSFAC + 96251127 96251138 1.0E-06 AAAATGAAAGTA 12 V_PAX8_B_M00328 TRANSFAC + 96253985 96254002 2.0E-06 ACTGTCAAGCGTGATCTG 18 V_CETS1P54_03_M01078 TRANSFAC - 96252459 96252474 4.0E-06 TGTAACGGATGTGACT 16 V_IRF7_01_M00453 TRANSFAC + 96251123 96251140 9.0E-06 TTGAAAAATGAAAGTACC 18 V_CAAT_01_M00254 TRANSFAC + 96251158 96251169 9.0E-06 CGCAACCAATCA 12 V_ALPHACP1_01_M00687 TRANSFAC + 96251160 96251170 3.0E-06 CAACCAATCAG 11 V_ALPHACP1_01_M00687 TRANSFAC + 96252652 96252662 6.0E-06 CCTCCAATCAG 11 V_NFYC_Q5_M02107 TRANSFAC + 96251160 96251173 3.0E-06 CAACCAATCAGACT 14 V_OBOX2_02_M03064 TRANSFAC - 96252427 96252443 2.0E-06 TAATGGGGATTTACTTT 17 V_TAL1_01_M01591 TRANSFAC - 96252890 96252902 2.0E-06 CCTCCTTCTCTTT 13 V_DR1_Q3_M00762 TRANSFAC + 96252712 96252724 1.0E-06 AGGTGAAAGGTCA 13 V_CAAT_C_M00200 TRANSFAC + 96252654 96252678 1.0E-06 TCCAATCAGCACGCACCTCTTTGCG 25 V_NFY_01_M00287 TRANSFAC + 96251158 96251173 5.0E-06 CGCAACCAATCAGACT 16 V_IRF1_Q6_01_M01881 TRANSFAC - 96251125 96251138 0.0E+00 TACTTTCATTTTTC 14 V_SOX2_01_M02246 TRANSFAC - 96254038 96254052 1.0E-05 GCATTGTCAGTCAAA 15 V_IRF1_01_M00062 TRANSFAC + 96251125 96251137 1.0E-06 GAAAAATGAAAGT 13 V_RFX3_04_M02788 TRANSFAC - 96252616 96252638 7.0E-06 AGTATCTCCTAGCAACCAGCAGC 23 V_UF1H3BETA_Q6_M01068 TRANSFAC - 96251150 96251163 8.0E-06 GTTGCGGGAGGGGA 14 V_RXRLXRB_01_M01198 TRANSFAC + 96252712 96252724 0.0E+00 AGGTGAAAGGTCA 13 V_SOX5_07_M02909 TRANSFAC + 96253486 96253502 8.0E-06 GGAGAAATTGACAGAAA 17 V_NFYA_Q5_M02106 TRANSFAC + 96251160 96251173 9.0E-06 CAACCAATCAGACT 14 V_OBOX3_02_M03065 TRANSFAC - 96252427 96252443 6.0E-06 TAATGGGGATTTACTTT 17 V_ATATA_B_M00311 TRANSFAC + 96254102 96254111 1.0E-05 TTACATAAGT 10 V_OBOX3_01_M01466 TRANSFAC - 96252427 96252443 6.0E-06 TAATGGGGATTTACTTT 17 V_RFX1_02_M00281 TRANSFAC - 96252844 96252861 9.0E-06 TCCTTACCATCGTAACCA 18 PPARG_RXRA_MA0065.2 JASPAR + 96252710 96252724 1.0E-06 GGAGGTGAAAGGTCA 15 V_TR4_03_M01782 TRANSFAC + 96252712 96252724 0.0E+00 AGGTGAAAGGTCA 13 V_NANOG_02_M01247 TRANSFAC + 96252417 96252436 7.0E-06 GTAAAAAGACAAAGTAAATC 20 V_PPARG_01_M00512 TRANSFAC + 96252708 96252728 0.0E+00 TGGGAGGTGAAAGGTCATAGT 21

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.