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SNRPD2 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 6633 small nuclear ribonucleoprotein D2 polypeptide 16.5kDa chr19 - 46194943 - 46200443 46195443 Transcription Factor Binding Sites   Download all TFBS in the SNRPD2 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints CTCF_MA0139.1 JASPAR - 46196755 46196773 0.0E+00 CAACCAGCAGGGGGCGCAG 19 Sox17_MA0078.1 JASPAR - 46195386 46195394 2.0E-06 TTCATTGTC 9 Pax5_MA0014.1 JASPAR - 46196326 46196345 9.0E-06 AAGCTACTGTTGCAGAACCA 20 RARB_nuclearreceptor_full_dimeric_16_1 SELEX - 46196287 46196302 4.0E-06 AAGGGTCATGCGCTCA 16 SPIC_ETS_full_monomeric_14_1 SELEX - 46195216 46195229 7.0E-06 AGGAAGAGGAAGTC 14 RARA_nuclearreceptor_full_dimeric_18_1 SELEX + 46198316 46198333 5.0E-06 GCAGATCACTTGAGGTCA 18 MEF2D_MADS_DBD_dimeric_12_1 SELEX + 46198379 46198390 2.0E-06 ACTAAAAATACA 12 MEF2D_MADS_DBD_dimeric_12_1 SELEX + 46198388 46198399 7.0E-06 ACAAAAAATAGC 12 RARG_nuclearreceptor_full_dimeric_17_1 SELEX + 46198317 46198333 5.0E-06 CAGATCACTTGAGGTCA 17 EWSR1-FLI1_MA0149.1 JASPAR - 46196632 46196649 9.0E-06 GGAAGGGAAGAATGAGAG 18 MEF2A_MADS_DBD_dimeric_12_1 SELEX + 46198379 46198390 6.0E-06 ACTAAAAATACA 12 RARA_nuclearreceptor_DBD_dimeric_18_2 SELEX + 46198327 46198344 8.0E-06 GAGGTCAGGAGTTCGAAT 18 SCRT2_C2H2_DBD_monomeric_13_1 SELEX - 46195864 46195876 7.0E-06 AAGCAACAGCTGC 13 SPIB_ETS_DBD_monomeric_14_1 SELEX - 46195216 46195229 7.0E-06 AGGAAGAGGAAGTC 14 MEF2B_MADS_full_dimeric_12_1 SELEX + 46198379 46198390 3.0E-06 ACTAAAAATACA 12 RUNX2_RUNX_DBD_dimeric_18_1 SELEX + 46196258 46196275 3.0E-06 TAACCGCAGATGCCACCG 18 RARG_nuclearreceptor_DBD_dimeric_17_2 SELEX + 46198317 46198333 1.0E-05 CAGATCACTTGAGGTCA 17 XBP1_bZIP_DBD_dimeric_14_1 SELEX - 46196232 46196245 6.0E-06 AAAGCCACGTCAAC 14 SP4_C2H2_full_monomeric_17_1 SELEX - 46195271 46195287 3.0E-06 CAGGCCACGCCTCCACT 17 CTCF_C2H2_full_monomeric_17_1 SELEX + 46196756 46196772 1.0E-06 TGCGCCCCCTGCTGGTT 17 NR2F1_nuclearreceptor_DBD_dimeric_16_1 SELEX + 46198327 46198342 8.0E-06 GAGGTCAGGAGTTCGA 16 GMEB2_SAND_DBD_dimer-of-dimers_15_1 SELEX + 46195571 46195585 2.0E-06 CGCGTTACTGACGTA 15 CREB3L1_bZIP_full_dimeric_14_1 SELEX - 46196231 46196244 7.0E-06 AAGCCACGTCAACC 14 Myf_MA0055.1 JASPAR - 46195865 46195876 0.0E+00 AAGCAACAGCTG 12 Nr2f6_nuclearreceptor_DBD_dimeric_15_1 SELEX + 46198327 46198341 2.0E-06 GAGGTCAGGAGTTCG 15 ETV6_ETS_full_dimeric_15_1 SELEX - 46195169 46195183 7.0E-06 GAGGAAACGGGAGTG 15 ETV6_ETS_full_dimeric_15_1 SELEX - 46195216 46195230 1.0E-06 CAGGAAGAGGAAGTC 15 RUNX3_RUNX_DBD_dimeric_18_1 SELEX + 46196258 46196275 3.0E-06 TAACCGCAGATGCCACCG 18 V_TCF3_01_M01594 TRANSFAC - 46198382 46198394 3.0E-06 TTTTTGTATTTTT 13 V_APOLYA_B_M00310 TRANSFAC - 46195680 46195694 5.0E-06 AATGAACAGCGTTTG 15 V_EBF_Q6_M00977 TRANSFAC - 46195758 46195768 3.0E-06 TTCCCCTGAGA 11 V_GATA1_Q6_M02004 TRANSFAC - 46196747 46196761 9.0E-06 GGCGCAGATAAGTGC 15 V_TCFE2A_04_M02927 TRANSFAC - 46195034 46195050 1.0E-06 AGGGGCAGATGTTTTAG 17 V_TCFE2A_04_M02927 TRANSFAC + 46195370 46195386 7.0E-06 GGGGGCAGATGTTTATG 17 V_PAX4_03_M00378 TRANSFAC + 46195094 46195105 2.0E-06 AATATCCACCCT 12 V_ACAAT_B_M00309 TRANSFAC - 46195610 46195618 8.0E-06 GATTGGTGG 9 V_COE1_Q6_M01871 TRANSFAC + 46195758 46195771 4.0E-06 TCTCAGGGGAACCA 14 V_NFAT3_Q3_M01734 TRANSFAC + 46195666 46195675 1.0E-05 ATATTTTCCA 10 V_RP58_01_M00532 TRANSFAC + 46195036 46195047 1.0E-05 AAAACATCTGCC 12 V_RP58_01_M00532 TRANSFAC - 46195373 46195384 8.0E-06 TAAACATCTGCC 12 V_MYB_05_M02779 TRANSFAC + 46195416 46195432 5.0E-06 ATTCAAACCGTTTCTTG 17 V_STAT6_01_M00494 TRANSFAC + 46195469 46195476 7.0E-06 TATTTCCA 8 V_SPZ1_01_M00446 TRANSFAC - 46195695 46195709 5.0E-06 GGAGGAGGGAAAGCC 15 V_AP4_Q6_01_M00927 TRANSFAC - 46195864 46195872 1.0E-05 AACAGCTGC 9 V_NFAT2_01_M01748 TRANSFAC - 46195668 46195676 2.0E-06 ATGGAAAAT 9 V_BRN2_01_M00145 TRANSFAC - 46195664 46195679 9.0E-06 ATCATGGAAAATATTC 16 V_TCFAP2E_04_M02926 TRANSFAC + 46198384 46198397 4.0E-06 AAATACAAAAAATA 14 V_MEF2A_Q6_M02024 TRANSFAC - 46198379 46198388 4.0E-06 TATTTTTAGT 10 V_LXRB_RXRA_Q5_M02021 TRANSFAC + 46198326 46198340 2.0E-06 TGAGGTCAGGAGTTC 15 V_RPC155_01_M01798 TRANSFAC + 46198331 46198346 0.0E+00 TCAGGAGTTCGAATAC 16 V_HELIOSA_02_M01004 TRANSFAC - 46195668 46195678 9.0E-06 TCATGGAAAAT 11 V_MYF_01_M01302 TRANSFAC - 46195865 46195876 0.0E+00 AAGCAACAGCTG 12 V_E2F1_01_M01250 TRANSFAC + 46195424 46195431 1.0E-05 CGTTTCTT 8 V_RSRFC4_Q2_M00407 TRANSFAC + 46198377 46198393 1.0E-05 CTACTAAAAATACAAAA 17 V_RSRFC4_Q2_M00407 TRANSFAC + 46198386 46198402 7.0E-06 ATACAAAAAATAGCCAG 17 V_MYBL1_03_M02780 TRANSFAC + 46195416 46195432 7.0E-06 ATTCAAACCGTTTCTTG 17 V_AP2BETA_Q3_M01858 TRANSFAC + 46195190 46195205 3.0E-06 GCTGCTGCCTGAGGAG 16 V_CDX2_Q5_M00729 TRANSFAC + 46195376 46195389 8.0E-06 AGATGTTTATGACA 14 V_TTF1_Q6_M00794 TRANSFAC - 46198320 46198331 7.0E-06 ACCTCAAGTGAT 12 V_HOXD11_01_M01434 TRANSFAC - 46195376 46195392 4.0E-06 CATTGTCATAAACATCT 17 V_ASCL2_03_M02737 TRANSFAC - 46195859 46195875 3.0E-06 AGCAACAGCTGCGGCTG 17 V_ASCL2_03_M02737 TRANSFAC + 46195860 46195876 1.0E-05 AGCCGCAGCTGTTGCTT 17 V_XBP1_02_M01770 TRANSFAC - 46196235 46196245 2.0E-06 AAAGCCACGTC 11 V_OCT1_04_M00138 TRANSFAC - 46195662 46195684 0.0E+00 GTTTGATCATGGAAAATATTCGA 23 V_SOX12_04_M02900 TRANSFAC + 46198382 46198397 9.0E-06 AAAAATACAAAAAATA 16 V_MEF2_04_M00233 TRANSFAC + 46198373 46198394 4.0E-06 ATCTCTACTAAAAATACAAAAA 22 V_MEF2_04_M00233 TRANSFAC + 46198382 46198403 8.0E-06 AAAAATACAAAAAATAGCCAGG 22 V_RFX_Q6_M00975 TRANSFAC + 46195285 46195293 4.0E-06 CTGTTGCCA 9 V_HIC1_02_M01072 TRANSFAC - 46196185 46196199 3.0E-06 CCGCGGTGCCCGGGT 15 V_HIC1_02_M01072 TRANSFAC - 46196780 46196794 5.0E-06 CCGGGCTGCCCGGGG 15 V_CTCF_02_M01259 TRANSFAC - 46196757 46196776 0.0E+00 GCACAACCAGCAGGGGGCGC 20 V_CTCF_01_M01200 TRANSFAC - 46196755 46196774 0.0E+00 ACAACCAGCAGGGGGCGCAG 20 V_BLIMP1_Q6_M01066 TRANSFAC + 46195449 46195464 4.0E-06 GAAGGAGGGAAATGAC 16 V_NEUROD_02_M01288 TRANSFAC + 46195188 46195199 7.0E-06 TTGCTGCTGCCT 12 V_ELF1_Q6_M00746 TRANSFAC - 46195217 46195228 1.0E-06 GGAAGAGGAAGT 12 V_CIZ_01_M00734 TRANSFAC + 46198389 46198397 6.0E-06 CAAAAAATA 9 V_MTF1_06_M02882 TRANSFAC + 46198384 46198397 0.0E+00 AAATACAAAAAATA 14 V_NFYC_Q5_M02107 TRANSFAC + 46195517 46195530 8.0E-06 AAGCCAATCCGCTC 14 V_CREBP1_Q2_M00179 TRANSFAC + 46195577 46195588 6.0E-06 ACTGACGTATCT 12 V_TAL1_01_M01591 TRANSFAC - 46195010 46195022 9.0E-06 CCTGCTTTTCTCC 13 V_GATA1_04_M00128 TRANSFAC + 46194938 46194950 3.0E-06 ATCTGATAAAGCT 13 V_CNOT3_01_M01253 TRANSFAC - 46195501 46195510 8.0E-06 GGCCGCGCCC 10 V_FOXL1_02_M02857 TRANSFAC - 46194395 46194410 9.0E-06 ATCTCAAAACGAAACA 16 V_E2F6_01_M01252 TRANSFAC + 46195424 46195431 1.0E-05 CGTTTCTT 8 V_PARP_Q3_M01211 TRANSFAC - 46195468 46195477 2.0E-06 TTGGAAATAG 10 V_XBP1_01_M00251 TRANSFAC + 46196230 46196246 3.0E-06 GGGTTGACGTGGCTTTA 17 V_ZFP206_01_M01742 TRANSFAC - 46195247 46195257 1.0E-06 TGCGCAGGCGC 11 V_NFY_01_M00287 TRANSFAC - 46195818 46195833 9.0E-06 CGAAACCAATAAGAAC 16 V_SPIC_02_M02077 TRANSFAC - 46195216 46195225 6.0E-06 AGAGGAAGTC 10 V_LMO2COM_02_M00278 TRANSFAC - 46194934 46194942 1.0E-05 CAGATAACG 9 V_T3RBETA_Q6_01_M02119 TRANSFAC + 46198318 46198334 1.0E-06 AGATCACTTGAGGTCAG 17 V_IRF6_03_M02770 TRANSFAC - 46195822 46195838 8.0E-06 AGCAGCGAAACCAATAA 17 V_LXRA_RXRA_Q3_M00647 TRANSFAC + 46198324 46198338 1.0E-06 CTTGAGGTCAGGAGT 15 V_EWSR1FLI1_01_M02252 TRANSFAC - 46196632 46196649 9.0E-06 GGAAGGGAAGAATGAGAG 18 V_SOX1_03_M02802 TRANSFAC + 46198381 46198396 7.0E-06 TAAAAATACAAAAAAT 16 V_ARP1_01_M00155 TRANSFAC - 46198326 46198341 3.0E-06 CGAACTCCTGACCTCA 16 V_TFE_Q6_M01029 TRANSFAC - 46195141 46195148 1.0E-05 TCATGTGA 8 V_RNF96_01_M01199 TRANSFAC - 46195974 46195983 7.0E-06 GCCCGCGGCC 10 V_SPIB_03_M02076 TRANSFAC - 46195216 46195225 7.0E-06 AGAGGAAGTC 10 V_ETV3_02_M02068 TRANSFAC - 46195236 46195245 9.0E-06 AACGGAAGTG 10 V_T3RALPHA_Q6_M01724 TRANSFAC + 46198324 46198334 1.0E-06 CTTGAGGTCAG 11 V_HSF1_Q6_01_M02017 TRANSFAC - 46196532 46196545 5.0E-06 GAGACTTCTAGGAT 14

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.