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SNAPC3 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 6619 small nuclear RNA activating complex, polypeptide 3, 50kDa chr9 + 15417781 - 15423281 15422781 Transcription Factor Binding Sites   Download all TFBS in the SNAPC3 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints FOXJ2_forkhead_DBD_dimeric_13_1 SELEX + 15422278 15422290 5.0E-06 AAAAACATTAAAA 13 E2F3_E2F_DBD_dimeric_18_2 SELEX + 15422987 15423004 2.0E-06 TAAATACGCGCGCTTTCC 18 E2F3_E2F_DBD_dimeric_18_2 SELEX - 15422987 15423004 1.0E-06 GGAAAGCGCGCGTATTTA 18 SOX10_HMG_full_dimeric_16_1 SELEX - 15426198 15426213 0.0E+00 AACACAGTGCAGTGTG 16 SOX9_HMG_full_dimeric_16_1 SELEX - 15426198 15426213 6.0E-06 AACACAGTGCAGTGTG 16 SRY_HMG_DBD_dimeric_13_2 SELEX + 15417849 15417861 4.0E-06 TGTAGAACATTCA 13 NR2E1_nuclearreceptor_full_monomeric_9_1 SELEX - 15426288 15426296 7.0E-06 AGAAGTCAA 9 FOXL1_forkhead_full_dimeric_13_1 SELEX + 15423463 15423475 6.0E-06 TGTTAATAAAGAA 13 SOX8_HMG_DBD_dimeric_16_1 SELEX - 15426198 15426213 6.0E-06 AACACAGTGCAGTGTG 16 SOX8_HMG_full_dimeric_17_1 SELEX - 15423747 15423763 9.0E-06 CAACGATTTCTGTGATT 17 E2F2_E2F_DBD_dimeric_16_1 SELEX + 15422988 15423003 2.0E-06 AAATACGCGCGCTTTC 16 Pax4_MA0068.1 JASPAR - 15422258 15422287 1.0E-06 TAATGTTTTTAAAAATTACAACAACCTTTC 30 RARG_nuclearreceptor_full_dimeric_18_1 SELEX + 15423224 15423241 4.0E-06 GGGGTCAAACAGGGTGCA 18 Sox17_HMG_DBD_dimeric_15_2 SELEX - 15426288 15426302 4.0E-06 ATGAGTAGAAGTCAA 15 GRHL1_CP2_DBD_dimer-of-dimers_17_1 SELEX + 15423585 15423601 1.0E-05 ACCCCGACTAACTGGTT 17 Rarb_nuclearreceptor_DBD_dimeric_17_1 SELEX + 15423225 15423241 7.0E-06 GGGTCAAACAGGGTGCA 17 RFX3_RFX_DBD_dimeric_15_1 SELEX + 15422581 15422595 2.0E-06 AGTTGCTACGTAACT 15 NFATC1_NFAT_full_dimeric_20_1 SELEX - 15422741 15422760 9.0E-06 ATCAGAAACTACATTTCCCG 20 Gata1_MA0035.2 JASPAR - 15426269 15426279 1.0E-05 GGAGATAAGCA 11 RFX4_RFX_DBD_dimeric_15_1 SELEX + 15422581 15422595 6.0E-06 AGTTGCTACGTAACT 15 Pou5f1_MA0142.1 JASPAR - 15417873 15417887 0.0E+00 TTTTAAGATGCAAAT 15 Tp53_p53l_DBD_dimeric_17_1 SELEX + 15417844 15417860 9.0E-06 ACATGTGTAGAACATTC 17 SOX18_HMG_full_dimeric_15_3 SELEX + 15426288 15426302 9.0E-06 TTGACTTCTACTCAT 15 RUNX1_MA0002.2 JASPAR + 15423283 15423293 2.0E-06 GCCTGTGGTTT 11 RORA_1_MA0071.1 JASPAR + 15426336 15426345 1.0E-05 ATTTAGGTCA 10 Sox2_MA0143.1 JASPAR - 15417874 15417888 9.0E-06 CTTTTAAGATGCAAA 15 FOXJ2_forkhead_DBD_dimeric_14_1 SELEX + 15422278 15422291 7.0E-06 AAAAACATTAAAAA 14 V_FOXP1_01_M00987 TRANSFAC - 15422281 15422300 2.0E-06 TAATGTATGTTTTTAATGTT 20 RXR_RAR_DR5_MA0159.1 JASPAR + 15423225 15423241 9.0E-06 GGGTCAAACAGGGTGCA 17 V_DBX1_01_M01483 TRANSFAC + 15423462 15423478 5.0E-06 TTGTTAATAAAGAAAAG 17 V_DBX1_01_M01483 TRANSFAC + 15423729 15423745 5.0E-06 CTTTTCATTATAAAATA 17 V_SOX40_04_M02908 TRANSFAC + 15423731 15423746 5.0E-06 TTTCATTATAAAATAT 16 V_SRY_07_M02813 TRANSFAC + 15423731 15423746 6.0E-06 TTTCATTATAAAATAT 16 V_SRY_07_M02813 TRANSFAC - 15423731 15423746 9.0E-06 ATATTTTATAATGAAA 16 V_STAT3STAT3_Q3_M01220 TRANSFAC + 15422737 15422750 7.0E-06 CTGCCGGGAAATGT 14 V_BCL6_01_M01183 TRANSFAC + 15423876 15423891 8.0E-06 CTTAAAGTATTGCTTT 16 V_BCL6_01_M01183 TRANSFAC + 15426156 15426171 5.0E-06 CTTGCTGATTTTTTTT 16 V_BCL6_01_M01183 TRANSFAC + 15426163 15426178 8.0E-06 ATTTTTTTTAAGCTTT 16 V_FOXO4_02_M00476 TRANSFAC - 15423831 15423844 6.0E-06 GGGTTGTTTTCCTA 14 V_MMEF2_Q6_M00405 TRANSFAC - 15426162 15426177 5.0E-06 AAGCTTAAAAAAAATC 16 V_POU5F1_02_M02245 TRANSFAC - 15417873 15417887 0.0E+00 TTTTAAGATGCAAAT 15 V_SATB1_Q3_M01723 TRANSFAC + 15422272 15422287 1.0E-05 ATTTTTAAAAACATTA 16 V_ZTA_Q2_M00711 TRANSFAC - 15423539 15423551 1.0E-06 TCACCATTACTCA 13 V_IRF_Q6_01_M00972 TRANSFAC + 15421007 15421017 8.0E-06 AGAAATGAAAA 11 V_IRF_Q6_01_M00972 TRANSFAC - 15426211 15426221 8.0E-06 GGAACTGAAAC 11 V_EVI1_02_M00079 TRANSFAC + 15423407 15423417 7.0E-06 GGACAAGACAG 11 V_POU2F3_01_M01476 TRANSFAC - 15417869 15417884 9.0E-06 TAAGATGCAAATGCAG 16 V_HOXC6_01_M01406 TRANSFAC + 15423461 15423477 1.0E-05 CTTGTTAATAAAGAAAA 17 V_SOX21_03_M02803 TRANSFAC + 15423731 15423746 1.0E-06 TTTCATTATAAAATAT 16 V_SOX21_03_M02803 TRANSFAC - 15423731 15423746 5.0E-06 ATATTTTATAATGAAA 16 V_SOX21_03_M02803 TRANSFAC - 15423738 15423753 3.0E-06 TGTGATTATATTTTAT 16 V_TCFAP2E_04_M02926 TRANSFAC - 15426163 15426176 1.0E-06 AGCTTAAAAAAAAT 14 V_ELF4_04_M02850 TRANSFAC - 15422267 15422283 8.0E-06 GTTTTTAAAAATTACAA 17 V_ELF4_04_M02850 TRANSFAC - 15426159 15426175 0.0E+00 GCTTAAAAAAAATCAGC 17 V_HELIOSA_02_M01004 TRANSFAC + 15423829 15423839 2.0E-06 TTTAGGAAAAC 11 V_ZFP105_03_M02827 TRANSFAC + 15422274 15422288 9.0E-06 TTTTAAAAACATTAA 15 V_OCT1_03_M00137 TRANSFAC - 15423730 15423742 3.0E-06 TTTATAATGAAAA 13 V_RUNX1_01_M02257 TRANSFAC + 15423283 15423293 2.0E-06 GCCTGTGGTTT 11 V_RXRA_03_M02791 TRANSFAC - 15423219 15423235 1.0E-05 CTGTTTGACCCCAAGCT 17 V_GFI1_01_M00250 TRANSFAC + 15423739 15423762 7.0E-06 TAAAATATAATCACAGAAATCGTT 24 V_HNF1_Q6_M00790 TRANSFAC - 15422274 15422291 7.0E-06 TTTTTAATGTTTTTAAAA 18 V_HNF1_Q6_M00790 TRANSFAC + 15423462 15423479 7.0E-06 TTGTTAATAAAGAAAAGC 18 V_NKX61_01_M00424 TRANSFAC - 15422279 15422291 1.0E-06 TTTTTAATGTTTT 13 V_RFX1_01_M00280 TRANSFAC - 15422580 15422596 4.0E-06 GAGTTACGTAGCAACTG 17 V_AMEF2_Q6_M00403 TRANSFAC - 15422266 15422283 8.0E-06 GTTTTTAAAAATTACAAC 18 V_OCT1_05_M00161 TRANSFAC + 15423726 15423739 1.0E-05 GGCCTTTTCATTAT 14 V_IRF_Q6_M00772 TRANSFAC - 15421007 15421021 1.0E-06 TACGTTTTCATTTCT 15 V_IRF_Q6_M00772 TRANSFAC + 15426207 15426221 6.0E-06 CTGTGTTTCAGTTCC 15 V_NKX22_02_M01372 TRANSFAC - 15421987 15422003 3.0E-06 TTTACCACTCGAAAGAA 17 V_EGR1_04_M02848 TRANSFAC + 15421990 15422005 7.0E-06 TTTCGAGTGGTAAAAA 16 V_MEF2_03_M00232 TRANSFAC - 15422265 15422286 7.0E-06 AATGTTTTTAAAAATTACAACA 22 V_HOX13_01_M00023 TRANSFAC - 15423530 15423559 8.0E-06 CCGCAGCTTCACCATTACTCAGGTTCCTCC 30 V_OCT1_04_M00138 TRANSFAC + 15422276 15422298 1.0E-05 TTAAAAACATTAAAAACATACAT 23 V_REX1_03_M01744 TRANSFAC + 15417820 15417831 0.0E+00 AACATGGCTGCC 12 V_GATA1_09_M02254 TRANSFAC - 15426269 15426279 1.0E-05 GGAGATAAGCA 11 V_NCX_02_M01420 TRANSFAC + 15422269 15422285 6.0E-06 GTAATTTTTAAAAACAT 17 V_NCX_02_M01420 TRANSFAC + 15422278 15422294 4.0E-06 AAAAACATTAAAAACAT 17 V_HB24_01_M01399 TRANSFAC + 15423733 15423747 5.0E-06 TCATTATAAAATATA 15 V_TBP_06_M02814 TRANSFAC + 15422269 15422284 8.0E-06 GTAATTTTTAAAAACA 16 V_TBP_06_M02814 TRANSFAC + 15423733 15423748 5.0E-06 TCATTATAAAATATAA 16 V_TBP_06_M02814 TRANSFAC - 15423733 15423748 5.0E-06 TTATATTTTATAATGA 16 V_STAT3_03_M01595 TRANSFAC + 15422736 15422751 6.0E-06 CCTGCCGGGAAATGTA 16 V_ISGF4G_04_M02875 TRANSFAC + 15422277 15422290 1.0E-06 TAAAAACATTAAAA 14 V_HOXD9_Q2_M01834 TRANSFAC + 15422280 15422289 5.0E-06 AAACATTAAA 10 V_RARA_04_M02891 TRANSFAC + 15423219 15423234 9.0E-06 AGCTTGGGGTCAAACA 16 V_MTF1_06_M02882 TRANSFAC + 15422271 15422284 8.0E-06 AATTTTTAAAAACA 14 V_MYF6_04_M02885 TRANSFAC + 15422632 15422646 3.0E-06 ACCGACAGCCGCAAC 15 V_TAL1_01_M01591 TRANSFAC + 15426267 15426279 0.0E+00 CTTGCTTATCTCC 13 V_IPF1_05_M01255 TRANSFAC + 15422280 15422291 0.0E+00 AAACATTAAAAA 12 V_OCT2_01_M01368 TRANSFAC - 15417869 15417884 9.0E-06 TAAGATGCAAATGCAG 16 V_ZBTB3_03_M02825 TRANSFAC + 15426195 15426211 4.0E-06 AGCCACACTGCACTGTG 17 V_FOXL1_02_M02857 TRANSFAC + 15423735 15423750 3.0E-06 ATTATAAAATATAATC 16 V_AIRE_01_M00999 TRANSFAC + 15420928 15420953 7.0E-06 TATGTGGTTGGTTGAATTGGAGGATG 26 V_TCF7_04_M02921 TRANSFAC - 15422270 15422284 7.0E-06 TGTTTTTAAAAATTA 15 V_TCF7_04_M02921 TRANSFAC + 15423731 15423745 6.0E-06 TTTCATTATAAAATA 15 V_FOXO3_01_M00477 TRANSFAC - 15423831 15423844 9.0E-06 GGGTTGTTTTCCTA 14 V_MYB_Q3_M00773 TRANSFAC + 15422575 15422585 7.0E-06 AGAGACAGTTG 11 V_STAT1STAT1_Q3_M01212 TRANSFAC - 15422736 15422748 1.0E-05 ATTTCCCGGCAGG 13 V_PITX2_Q2_M00482 TRANSFAC + 15423744 15423754 9.0E-06 TATAATCACAG 11 V_LMO2COM_02_M00278 TRANSFAC + 15420963 15420971 7.0E-06 CAGATAGGG 9 V_RXR_RAR_01_M02272 TRANSFAC + 15423225 15423241 9.0E-06 GGGTCAAACAGGGTGCA 17 V_SOX2_01_M02246 TRANSFAC - 15417874 15417888 9.0E-06 CTTTTAAGATGCAAA 15 V_GATA2_03_M00349 TRANSFAC + 15426126 15426135 7.0E-06 ACAGATATGA 10 V_SRF_06_M02916 TRANSFAC - 15426158 15426174 1.0E-06 CTTAAAAAAAATCAGCA 17 V_SRF_06_M02916 TRANSFAC - 15426159 15426175 2.0E-06 GCTTAAAAAAAATCAGC 17 V_COREBINDINGFACTOR_Q6_M00722 TRANSFAC + 15423286 15423293 1.0E-05 TGTGGTTT 8 V_PIT1_Q6_M00802 TRANSFAC + 15426263 15426280 4.0E-06 CATTCTTGCTTATCTCCT 18 V_CMAF_01_M01070 TRANSFAC + 15426153 15426171 5.0E-06 GACCTTGCTGATTTTTTTT 19 V_GATA6_04_M02757 TRANSFAC - 15426266 15426282 9.0E-06 TCAGGAGATAAGCAAGA 17 V_ZFP128_04_M02932 TRANSFAC - 15422284 15422297 1.0E-05 TGTATGTTTTTAAT 14 V_SOX5_04_M02910 TRANSFAC + 15423809 15423823 8.0E-06 CTTCGTAATTCAGTA 15 V_TCF3_05_M02920 TRANSFAC - 15426163 15426177 1.0E-06 AAGCTTAAAAAAAAT 15 V_GLIS2_04_M02863 TRANSFAC - 15422273 15422286 9.0E-06 AATGTTTTTAAAAA 14 V_GLIS2_04_M02863 TRANSFAC + 15423461 15423474 1.0E-06 CTTGTTAATAAAGA 14 V_MIF1_01_M00279 TRANSFAC + 15422580 15422597 2.0E-06 CAGTTGCTACGTAACTCG 18 V_SOX14_03_M02798 TRANSFAC + 15423731 15423746 1.0E-05 TTTCATTATAAAATAT 16 V_NANOG_02_M01247 TRANSFAC + 15422274 15422293 4.0E-06 TTTTAAAAACATTAAAAACA 20 V_NANOG_02_M01247 TRANSFAC + 15423464 15423483 2.0E-06 GTTAATAAAGAAAAGCAATC 20 V_OCT4_01_M01125 TRANSFAC - 15417873 15417887 0.0E+00 TTTTAAGATGCAAAT 15 V_OCT4_01_M01125 TRANSFAC - 15423729 15423743 4.0E-06 TTTTATAATGAAAAG 15 V_TCF11_01_M00285 TRANSFAC + 15426342 15426354 4.0E-06 GTCATCTTGTATG 13

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.