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SMARCE1 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 6605 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 chr17 - 38803603 - 38809103 38804103 Transcription Factor Binding Sites   Download all TFBS in the SMARCE1 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints ZNF713_C2H2_full_monomeric_17_1 SELEX + 38803172 38803188 4.0E-06 TAAAGAACAGCCAGAAA 17 NFYA_MA0060.1 JASPAR + 38803656 38803671 8.0E-06 CTGAACCAATGGGGGA 16 znf143_MA0088.1 JASPAR + 38803238 38803257 4.0E-06 CAACATCCAGCAGGCCTCGC 20 BCL6B_C2H2_DBD_monomeric_17_1 SELEX - 38805067 38805083 6.0E-06 TGCTTTCAAGGCCTTCA 17 PRDM4_C2H2_full_monomeric_13_1 SELEX - 38805068 38805080 8.0E-06 TTTCAAGGCCTTC 13 Sox2_MA0143.1 JASPAR + 38803736 38803750 5.0E-06 TCTTTGTCTTGGAGA 15 Foxj3_forkhead_DBD_dimeric_13_1 SELEX - 38804136 38804148 6.0E-06 AAAAAAAAAAAAA 13 Foxj3_forkhead_DBD_dimeric_13_1 SELEX - 38804137 38804149 5.0E-06 GAAAAAAAAAAAA 13 FOXJ2_forkhead_DBD_dimeric_14_1 SELEX - 38804136 38804149 8.0E-06 GAAAAAAAAAAAAA 14 V_DMRT4_01_M01149 TRANSFAC - 38804262 38804274 1.0E-06 AAAGTATCAAAAT 13 V_ELF5_03_M02057 TRANSFAC - 38804144 38804153 5.0E-06 CCCGGAAAAA 10 V_MINI20_B_M00324 TRANSFAC + 38804659 38804679 6.0E-06 TCCTGCCCTCACGGCGGGGGA 21 V_FOXP1_01_M00987 TRANSFAC + 38804129 38804148 0.0E+00 TTCTTAATTTTTTTTTTTTT 20 V_TGIF_01_M00418 TRANSFAC + 38803232 38803242 9.0E-06 AGCTGTCAACA 11 V_MEIS1_02_M01419 TRANSFAC + 38803228 38803243 1.0E-06 AGGGAGCTGTCAACAT 16 V_DBX1_01_M01483 TRANSFAC - 38804126 38804142 5.0E-06 AAAAAAATTAAGAAGAG 17 V_PREP1_01_M01459 TRANSFAC + 38803228 38803243 2.0E-06 AGGGAGCTGTCAACAT 16 V_FLI1_Q6_M01208 TRANSFAC + 38803583 38803593 8.0E-06 CAGGAAGTGCC 11 V_FXR_Q3_M00631 TRANSFAC - 38803551 38803564 9.0E-06 CAAGTTGTTTAAAC 14 V_ALX4_01_M00619 TRANSFAC - 38804222 38804234 4.0E-06 CCTGAAAAAAATC 13 V_DMRT3_01_M01148 TRANSFAC + 38804262 38804276 2.0E-06 ATTTTGATACTTTCC 15 V_ZFX_01_M01593 TRANSFAC + 38803245 38803260 9.0E-06 CAGCAGGCCTCGCTGC 16 V_PAX4_03_M00378 TRANSFAC + 38804016 38804027 7.0E-06 AACACTCACCCG 12 V_HMGIY_Q3_M01010 TRANSFAC + 38804130 38804144 3.0E-06 TCTTAATTTTTTTTT 15 V_HMGIY_Q3_M01010 TRANSFAC + 38804134 38804148 5.0E-06 AATTTTTTTTTTTTT 15 V_HMGIY_Q3_M01010 TRANSFAC + 38804218 38804232 1.0E-05 CAGGGATTTTTTTCA 15 V_EVI1_04_M00081 TRANSFAC - 38804133 38804147 6.0E-06 AAAAAAAAAAAATTA 15 V_EVI1_04_M00081 TRANSFAC - 38804136 38804150 4.0E-06 GGAAAAAAAAAAAAA 15 V_FOXD3_01_M00130 TRANSFAC + 38804134 38804145 9.0E-06 AATTTTTTTTTT 12 V_BCL6_01_M01183 TRANSFAC - 38803173 38803188 8.0E-06 TTTCTGGCTGTTCTTT 16 V_BCL6_01_M01183 TRANSFAC + 38804128 38804143 1.0E-06 CTTCTTAATTTTTTTT 16 V_BCL6_01_M01183 TRANSFAC + 38804129 38804144 4.0E-06 TTCTTAATTTTTTTTT 16 V_BCL6_01_M01183 TRANSFAC + 38804133 38804148 2.0E-06 TAATTTTTTTTTTTTT 16 V_DEAF1_02_M01002 TRANSFAC - 38804243 38804267 2.0E-06 CAAAATTCGGGGAGTTTTGAGGATC 25 V_IK_Q5_M01169 TRANSFAC - 38803854 38803863 5.0E-06 GTTGGGAGGG 10 V_PROP1_01_M01294 TRANSFAC + 38804133 38804143 5.0E-06 TAATTTTTTTT 11 V_SP1_Q6_01_M00931 TRANSFAC - 38804081 38804090 4.0E-06 GGGGCGGGGC 10 V_IRF2_Q6_M01882 TRANSFAC + 38802419 38802434 1.0E-05 TGAGAATAGAAAGTGA 16 V_POU3F2_02_M00464 TRANSFAC - 38803275 38803284 9.0E-06 TTATGTTAGT 10 V_EAR2_Q2_M01728 TRANSFAC + 38804062 38804075 8.0E-06 TTCCCTTTGTCCCG 14 V_NERF_Q2_M00531 TRANSFAC + 38804481 38804498 8.0E-06 TGGCAGCAAGCAGTTCGG 18 V_HEN1_01_M00068 TRANSFAC + 38803835 38803856 6.0E-06 GGGGGCCCCAGATGGGACTCCC 22 V_TCFAP2E_04_M02926 TRANSFAC - 38804134 38804147 4.0E-06 AAAAAAAAAAAATT 14 V_TCFAP2E_04_M02926 TRANSFAC - 38804135 38804148 3.0E-06 AAAAAAAAAAAAAT 14 V_TCFAP2E_04_M02926 TRANSFAC - 38804136 38804149 3.0E-06 GAAAAAAAAAAAAA 14 V_TCFAP2E_04_M02926 TRANSFAC - 38804140 38804153 8.0E-06 CCCGGAAAAAAAAA 14 V_TCFAP2E_04_M02926 TRANSFAC - 38804222 38804235 7.0E-06 TCCTGAAAAAAATC 14 V_TCFAP2E_04_M02926 TRANSFAC - 38804223 38804236 9.0E-06 GTCCTGAAAAAAAT 14 V_PAX6_02_M01391 TRANSFAC + 38804129 38804144 7.0E-06 TTCTTAATTTTTTTTT 16 V_AR_03_M00956 TRANSFAC - 38803169 38803195 8.0E-06 TCAAAGGTTTCTGGCTGTTCTTTAAGA 27 V_TGIF2_01_M01407 TRANSFAC + 38803228 38803243 3.0E-06 AGGGAGCTGTCAACAT 16 V_RPC155_01_M01798 TRANSFAC - 38803601 38803616 2.0E-06 GCCTGGGTTTGAAACC 16 V_ETS_Q4_M00771 TRANSFAC - 38803583 38803594 8.0E-06 TGGCACTTCCTG 12 V_ELF4_04_M02850 TRANSFAC - 38804132 38804148 9.0E-06 AAAAAAAAAAAAATTAA 17 V_ELF4_04_M02850 TRANSFAC - 38804133 38804149 0.0E+00 GAAAAAAAAAAAAATTA 17 V_ELF4_04_M02850 TRANSFAC - 38804134 38804150 1.0E-06 GGAAAAAAAAAAAAATT 17 V_ELF4_04_M02850 TRANSFAC - 38804135 38804151 5.0E-06 CGGAAAAAAAAAAAAAT 17 V_COMP1_01_M00057 TRANSFAC - 38803159 38803182 9.0E-06 GCTGTTCTTTAAGAGGGAAAGACT 24 V_ZNF219_01_M01122 TRANSFAC - 38803683 38803694 2.0E-06 CACCCCCCACCC 12 V_ETV7_01_M02071 TRANSFAC - 38804144 38804153 2.0E-06 CCCGGAAAAA 10 V_MEIS2_01_M01488 TRANSFAC + 38803228 38803243 2.0E-06 AGGGAGCTGTCAACAT 16 V_FOXA2_02_M02853 TRANSFAC + 38803272 38803286 5.0E-06 ACAACTAACATAAGC 15 V_PR_Q2_M00960 TRANSFAC + 38803172 38803181 9.0E-06 TAAAGAACAG 10 V_TGIF_02_M01346 TRANSFAC - 38803228 38803244 2.0E-06 GATGTTGACAGCTCCCT 17 V_SPI1_03_M02078 TRANSFAC + 38804383 38804392 1.0E-05 CGAGGAAGTG 10 V_ZFP105_03_M02827 TRANSFAC - 38804132 38804146 1.0E-06 AAAAAAAAAAATTAA 15 V_ZFP105_03_M02827 TRANSFAC - 38804133 38804147 0.0E+00 AAAAAAAAAAAATTA 15 V_ZFP105_03_M02827 TRANSFAC - 38804134 38804148 1.0E-06 AAAAAAAAAAAAATT 15 V_ZFP105_03_M02827 TRANSFAC - 38804135 38804149 2.0E-06 GAAAAAAAAAAAAAT 15 V_ZFP105_03_M02827 TRANSFAC - 38804136 38804150 4.0E-06 GGAAAAAAAAAAAAA 15 V_NKX61_01_M00424 TRANSFAC + 38804129 38804141 1.0E-06 TTCTTAATTTTTT 13 V_SP1_Q6_M00196 TRANSFAC - 38804080 38804092 2.0E-06 GAGGGGCGGGGCG 13 V_ARID3A_02_M02839 TRANSFAC - 38804261 38804275 3.0E-06 GAAAGTATCAAAATT 15 V_RXRA_04_M02895 TRANSFAC + 38803544 38803559 6.0E-06 TCGGAAAGTTTAAACA 16 V_HNF1_Q6_01_M01011 TRANSFAC - 38804127 38804147 1.0E-06 AAAAAAAAAAAATTAAGAAGA 21 V_OCT1_08_M01354 TRANSFAC - 38804129 38804144 7.0E-06 AAAAAAAAATTAAGAA 16 V_SP3_Q3_M00665 TRANSFAC - 38803708 38803721 9.0E-06 AGCCGTGGGCAAGG 14 V_TGIF1_01_M03111 TRANSFAC - 38803228 38803244 2.0E-06 GATGTTGACAGCTCCCT 17 V_SP4_Q5_M01273 TRANSFAC + 38804081 38804091 8.0E-06 GCCCCGCCCCT 11 V_HBP1_04_M02866 TRANSFAC + 38803512 38803528 0.0E+00 TATCCCCATTTTACAGA 17 V_MRG2_01_M01395 TRANSFAC + 38803228 38803243 3.0E-06 AGGGAGCTGTCAACAT 16 V_FAC1_01_M00456 TRANSFAC - 38804136 38804149 9.0E-06 GAAAAAAAAAAAAA 14 V_PKNOX2_01_M01411 TRANSFAC + 38803228 38803243 1.0E-06 AGGGAGCTGTCAACAT 16 V_IPF1_05_M01255 TRANSFAC - 38804129 38804140 8.0E-06 AAAAATTAAGAA 12 V_TCFE2A_03_M02823 TRANSFAC + 38803785 38803801 3.0E-06 ATTCACAGGTGCTTTGA 17 V_BARHL1_01_M01332 TRANSFAC - 38804129 38804144 1.0E-05 AAAAAAAAATTAAGAA 16 V_PARP_Q3_M01211 TRANSFAC + 38804170 38804179 8.0E-06 TTAGAAAAAC 10 V_NFY_01_M00287 TRANSFAC + 38803656 38803671 9.0E-06 CTGAACCAATGGGGGA 16 V_BDP1_01_M01796 TRANSFAC + 38803601 38803612 8.0E-06 GGTTTCAAACCC 12 V_SPIC_02_M02077 TRANSFAC + 38804383 38804392 9.0E-06 CGAGGAAGTG 10 V_STAT6_02_M00500 TRANSFAC + 38803206 38803213 1.0E-05 GATTTCCT 8 V_OCT1_06_M00162 TRANSFAC + 38804259 38804272 1.0E-05 CGAATTTTGATACT 14 V_SOX2_01_M02246 TRANSFAC + 38803736 38803750 5.0E-06 TCTTTGTCTTGGAGA 15 V_SRF_06_M02916 TRANSFAC - 38804132 38804148 1.0E-06 AAAAAAAAAAAAATTAA 17 V_SRF_06_M02916 TRANSFAC - 38804133 38804149 0.0E+00 GAAAAAAAAAAAAATTA 17 V_SRF_06_M02916 TRANSFAC - 38804134 38804150 0.0E+00 GGAAAAAAAAAAAAATT 17 V_SRF_06_M02916 TRANSFAC - 38804135 38804151 0.0E+00 CGGAAAAAAAAAAAAAT 17 V_SRF_06_M02916 TRANSFAC - 38804136 38804152 1.0E-06 CCGGAAAAAAAAAAAAA 17 V_PAX4_02_M00377 TRANSFAC - 38804131 38804141 2.0E-06 AAAAAATTAAG 11 V_SP1_Q2_01_M00933 TRANSFAC + 38804082 38804091 7.0E-06 CCCCGCCCCT 10 V_CP2_01_M00072 TRANSFAC - 38804341 38804351 6.0E-06 GCTAAACCCAG 11 V_SP1_Q4_01_M00932 TRANSFAC - 38804080 38804092 4.0E-06 GAGGGGCGGGGCG 13 V_BRF1_01_M01747 TRANSFAC - 38803600 38803612 6.0E-06 GGGTTTGAAACCC 13 V_TCF3_05_M02920 TRANSFAC - 38804134 38804148 9.0E-06 AAAAAAAAAAAAATT 15 V_TCF3_05_M02920 TRANSFAC - 38804138 38804152 5.0E-06 CCGGAAAAAAAAAAA 15 V_TCF3_05_M02920 TRANSFAC - 38804139 38804153 2.0E-06 CCCGGAAAAAAAAAA 15 V_TCF3_05_M02920 TRANSFAC - 38804140 38804154 7.0E-06 GCCCGGAAAAAAAAA 15

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.