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SMARCD1


EntrezDescriptionChrom.StrandPromoter
(Start - Stop)
TSS
6602 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1 chr12 +50473982 - 50479482 50478982

Transcription Factor Binding Sites

 
Download all TFBS in the SMARCD1 promoter
 
MotifSourceStrandStartStop PValueMatch
Sequence
Overlap w/
Footprints
FOXB1_forkhead_DBD_dimeric_18_1 SELEX - 50482859 50482876 3.0E-06 AATGTAAATGTAAACAGA 18
CTCF_MA0139.1 JASPAR + 50482566 50482584 0.0E+00 TGACCTCTAGGTGGCACTA 19
FOXJ2_forkhead_DBD_dimeric_13_1 SELEX - 50482861 50482873 1.0E-06 GTAAATGTAAACA 13
Foxa2_MA0047.2 JASPAR + 50482861 50482872 2.0E-06 TGTTTACATTTA 12
Tp53_p53l_DBD_dimeric_18_1 SELEX - 50482609 50482626 3.0E-06 ACAAGTTAGGTTACAAGA 18
IRF7_IRF_DBD_dimeric_14_1 SELEX + 50478723 50478736 5.0E-06 AAGAAAACGAAACG 14
SPIC_ETS_full_monomeric_14_1 SELEX - 50482839 50482852 8.0E-06 ACCAAGAGGAAGTC 14
KLF16_C2H2_DBD_monomeric_11_1 SELEX - 50479362 50479372 1.0E-05 GCCCCGCCCCC 11
FOXA1_MA0148.1 JASPAR + 50482861 50482871 1.0E-06 TGTTTACATTT 11
MEF2D_MADS_DBD_dimeric_12_1 SELEX - 50481808 50481819 4.0E-06 GCTAAAAATAAG 12
FOXC2_forkhead_DBD_monomeric_12_1 SELEX - 50482859 50482870 4.0E-06 AATGTAAACAGA 12
NR2F1_nuclearreceptor_DBD_monomeric_13_1 SELEX - 50478621 50478633 6.0E-06 CAAAGGTCAACCA 13
EBF1_EBF_full_dimeric_14_1 SELEX - 50479420 50479433 9.0E-06 CCTCCCAAGGGAGT 14
FOXO3_MA0157.1 JASPAR - 50482861 50482868 7.0E-06 TGTAAACA 8
SOX9_HMG_full_dimeric_17_3 SELEX - 50481961 50481977 7.0E-06 AATGAATCACAGGCAAT 17
MEF2A_MADS_DBD_dimeric_12_1 SELEX - 50481808 50481819 3.0E-06 GCTAAAAATAAG 12
NR2F1_MA0017.1 JASPAR + 50476577 50476590 3.0E-06 TAACCTTTGCACTG 14
NR2F1_MA0017.1 JASPAR + 50478625 50478638 6.0E-06 TGACCTTTGCCAAG 14
MEF2B_MADS_full_dimeric_12_1 SELEX - 50481808 50481819 5.0E-06 GCTAAAAATAAG 12
IRF1_MA0050.1 JASPAR + 50478725 50478736 4.0E-06 GAAAACGAAACG 12
Ar_MA0007.1 JASPAR + 50475047 50475068 5.0E-06 TTAAGCACAAGCTGTGCCGACG 22
FOXD3_forkhead_DBD_dimeric_14_1 SELEX + 50482861 50482874 1.0E-05 TGTTTACATTTACA 14
MEF2A_MA0052.1 JASPAR + 50481809 50481818 2.0E-06 TTATTTTTAG 10
SP1_MA0079.2 JASPAR - 50479093 50479102 7.0E-06 CCCCGCCCCC 10
SP1_MA0079.2 JASPAR - 50479342 50479351 9.0E-06 CCCCTCCTCC 10
SP1_MA0079.2 JASPAR - 50479362 50479371 7.0E-06 CCCCGCCCCC 10
FOXB1_forkhead_DBD_putative-multimer_14_1 SELEX - 50481913 50481926 6.0E-06 GAATGACACCACCA 14
FOXI1_MA0042.1 JASPAR + 50482585 50482596 5.0E-06 GCATGTTTAGTT 12
SP4_C2H2_full_monomeric_17_1 SELEX - 50478968 50478984 7.0E-06 CTGGCCACGCCCTCCCG 17
CTCF_C2H2_full_monomeric_17_1 SELEX - 50482567 50482583 1.0E-06 AGTGCCACCTAGAGGTC 17
NR2C2_nuclearreceptor_DBD_dimeric_14_1 SELEX - 50476577 50476590 6.0E-06 CAGTGCAAAGGTTA 14
YY2_C2H2_full_monomeric_11_1 SELEX - 50479150 50479160 4.0E-06 GCCGCCATCTT 11
HNF4A_nuclearreceptor_full_dimeric_15_1 SELEX - 50476576 50476590 4.0E-06 CAGTGCAAAGGTTAC 15
Klf12_C2H2_DBD_monomeric_15_1 SELEX - 50478968 50478982 4.0E-06 GGCCACGCCCTCCCG 15
HNF4A_MA0114.1 JASPAR - 50476577 50476589 2.0E-06 AGTGCAAAGGTTA 13
HNF4A_nuclearreceptor_full_dimeric_14_1 SELEX - 50476577 50476590 7.0E-06 CAGTGCAAAGGTTA 14
IRF3_IRF_full_trimeric_21_1 SELEX + 50478723 50478743 0.0E+00 AAGAAAACGAAACGAAAAGCA 21
IRF3_IRF_full_trimeric_21_1 SELEX - 50479104 50479124 1.0E-05 AAAGAACCGGAACCGGAACTC 21
ETV6_ETS_full_dimeric_15_1 SELEX - 50479104 50479118 1.0E-06 CCGGAACCGGAACTC 15
PLAG1_MA0163.1 JASPAR + 50479083 50479096 4.0E-06 GGGGCGCTCGGGGG 14
RXRA_nuclearreceptor_full_dimeric_14_1 SELEX - 50476577 50476590 1.0E-05 CAGTGCAAAGGTTA 14
Foxj3_forkhead_DBD_dimeric_13_1 SELEX - 50482861 50482873 0.0E+00 GTAAATGTAAACA 13
FOXB1_forkhead_DBD_monomeric_11_1 SELEX - 50482860 50482870 8.0E-06 AATGTAAACAG 11
NFIA_NFI_full_monomeric_10_1 SELEX + 50478630 50478639 9.0E-06 TTTGCCAAGT 10
Irx3_homeodomain_DBD_dimeric_12_1 SELEX - 50482633 50482644 5.0E-06 TAACATTAAAAA 12
IRF2_MA0051.1 JASPAR + 50478724 50478741 3.0E-06 AGAAAACGAAACGAAAAG 18
V_FOXP1_01_M00987 TRANSFAC + 50482020 50482039 4.0E-06 TTATGTGCAATGGTTTGCTT 20
V_AP2ALPHA_Q6_M01857 TRANSFAC - 50479358 50479368 6.0E-06 CGCCCCCGGCC 11
V_GEN_INI_B_M00315 TRANSFAC + 50482046 50482053 1.0E-05 CCTCATTT 8
V_APOLYA_B_M00310 TRANSFAC + 50478679 50478693 6.0E-06 AATAAACTGTGTTTC 15
V_EBF_Q6_M00977 TRANSFAC + 50479421 50479431 3.0E-06 CTCCCTTGGGA 11
V_FOXO3_02_M02270 TRANSFAC - 50482861 50482868 7.0E-06 TGTAAACA 8
V_ATF5_01_M01295 TRANSFAC + 50482347 50482357 3.0E-06 TCTCTTCCTTT 11
V_FOXA2_04_M02749 TRANSFAC - 50482856 50482872 1.0E-06 TAAATGTAAACAGAGCA 17
V_XPF1_Q6_M00684 TRANSFAC + 50479618 50479627 3.0E-06 TCAGAGGAAC 10
V_EVI1_04_M00081 TRANSFAC - 50482614 50482628 6.0E-06 GGACAAGTTAGGTTA 15
V_SP1_Q6_01_M00931 TRANSFAC + 50479363 50479372 4.0E-06 GGGGCGGGGC 10
V_MEF2_02_M00231 TRANSFAC - 50481804 50481825 3.0E-06 CGAGCAGCTAAAAATAAGAGCC 22
V_NR2F2_03_M02783 TRANSFAC - 50478621 50478636 5.0E-06 TGGCAAAGGTCAACCA 16
V_IRF2_Q6_M01882 TRANSFAC + 50478723 50478738 1.0E-06 AAGAAAACGAAACGAA 16
V_POU2F3_01_M01476 TRANSFAC - 50482864 50482879 9.0E-06 TGGAATGTAAATGTAA 16
V_FOXO3A_Q1_M01137 TRANSFAC - 50481806 50481817 9.0E-06 TAAAAATAAGAG 12
V_EAR2_Q2_M01728 TRANSFAC + 50476577 50476590 4.0E-06 TAACCTTTGCACTG 14
V_AP2_Q6_01_M00915 TRANSFAC - 50478891 50478903 2.0E-06 GCGCCCCCAGGCC 13
V_IRF3_05_M02767 TRANSFAC + 50478724 50478737 9.0E-06 AGAAAACGAAACGA 14
V_SP1_03_M02281 TRANSFAC - 50479093 50479102 7.0E-06 CCCCGCCCCC 10
V_SP1_03_M02281 TRANSFAC - 50479342 50479351 9.0E-06 CCCCTCCTCC 10
V_SP1_03_M02281 TRANSFAC - 50479362 50479371 7.0E-06 CCCCGCCCCC 10
V_HNF4A_03_M02220 TRANSFAC - 50476577 50476589 2.0E-06 AGTGCAAAGGTTA 13
V_HFH4_01_M00742 TRANSFAC + 50482028 50482040 3.0E-06 AATGGTTTGCTTA 13
V_GKLF_02_M01588 TRANSFAC - 50478970 50478981 4.0E-06 GCCACGCCCTCC 12
V_PPAR_DR1_Q2_M00763 TRANSFAC + 50478625 50478637 4.0E-06 TGACCTTTGCCAA 13
V_SP1_02_M01303 TRANSFAC + 50479094 50479104 3.0E-06 GGGGCGGGGGG 11
V_SP1_02_M01303 TRANSFAC + 50479396 50479406 5.0E-06 GGGGTGGGGGG 11
V_CACCCBINDINGFACTOR_Q6_M00721 TRANSFAC + 50479438 50479453 4.0E-06 CGGGCTCTGGGTGGGG 16
V_PU1_Q4_M01172 TRANSFAC + 50482342 50482360 1.0E-06 GAAGTTCTCTTCCTTTTTT 19
V_MEF2A_Q6_M02024 TRANSFAC + 50481810 50481819 1.0E-06 TATTTTTAGC 10
V_TAL1_Q6_M00993 TRANSFAC + 50481904 50481913 1.0E-06 TCCATCTGCT 10
V_ZNF219_01_M01122 TRANSFAC - 50479095 50479106 7.0E-06 CTCCCCCCGCCC 12
V_ZNF219_01_M01122 TRANSFAC - 50479397 50479408 2.0E-06 CTCCCCCCACCC 12
V_GC_01_M00255 TRANSFAC + 50479361 50479374 8.0E-06 CGGGGGCGGGGCCG 14
V_GEN_INI3_B_M00314 TRANSFAC + 50482046 50482053 1.0E-05 CCTCATTT 8
V_FOXO1_02_M00474 TRANSFAC + 50482857 50482870 5.0E-06 GCTCTGTTTACATT 14
V_ZFP410_03_M02832 TRANSFAC - 50479008 50479024 7.0E-06 GACTATGGGATAGAGCG 17
V_TCFAP2C_03_M02821 TRANSFAC + 50482051 50482065 5.0E-06 TTTCCCTTGGGCAAA 15
V_HNF4_01_B_M00411 TRANSFAC - 50476576 50476590 6.0E-06 CAGTGCAAAGGTTAC 15
V_COUP_01_M00158 TRANSFAC + 50476577 50476590 3.0E-06 TAACCTTTGCACTG 14
V_COUP_01_M00158 TRANSFAC + 50478625 50478638 6.0E-06 TGACCTTTGCCAAG 14
V_TEF_Q6_M00672 TRANSFAC - 50482864 50482875 2.0E-06 ATGTAAATGTAA 12
Hand1_Tcfe2a_MA0092.1 JASPAR + 50478583 50478592 8.0E-06 TATCTGGAAT 10
V_KROX_Q6_M00982 TRANSFAC - 50479357 50479370 5.0E-06 CCCGCCCCCGGCCC 14
V_RSRFC4_Q2_M00407 TRANSFAC - 50481805 50481821 4.0E-06 CAGCTAAAAATAAGAGC 17
V_SP1_Q6_M00196 TRANSFAC + 50479092 50479104 6.0E-06 GGGGGGCGGGGGG 13
V_SP1_Q6_M00196 TRANSFAC + 50479361 50479373 1.0E-06 CGGGGGCGGGGCC 13
V_HNF3A_01_M01261 TRANSFAC - 50482860 50482869 3.0E-06 ATGTAAACAG 10
V_HNF3_Q6_M00791 TRANSFAC - 50482859 50482871 7.0E-06 AAATGTAAACAGA 13
V_IRF_Q6_M00772 TRANSFAC - 50478725 50478739 6.0E-06 TTTCGTTTCGTTTTC 15
V_YY1_Q6_02_M01035 TRANSFAC - 50479150 50479160 7.0E-06 GCCGCCATCTT 11
V_OCT1_04_M00138 TRANSFAC - 50482861 50482883 0.0E+00 GAATTGGAATGTAAATGTAAACA 23
V_REX1_03_M01744 TRANSFAC + 50479150 50479161 0.0E+00 AAGATGGCGGCC 12
V_RREB1_01_M00257 TRANSFAC - 50479447 50479460 2.0E-06 CCCCAACCCCCACC 14
V_MEF2_Q6_01_M00941 TRANSFAC + 50481807 50481818 3.0E-06 TCTTATTTTTAG 12
V_ISGF3G_03_M02771 TRANSFAC + 50478724 50478738 4.0E-06 AGAAAACGAAACGAA 15
V_CTCF_02_M01259 TRANSFAC + 50482563 50482582 0.0E+00 CATTGACCTCTAGGTGGCAC 20
V_NR1B1_Q6_M02110 TRANSFAC - 50478623 50478632 4.0E-06 AAAGGTCAAC 10
V_CTCF_01_M01200 TRANSFAC + 50482565 50482584 0.0E+00 TTGACCTCTAGGTGGCACTA 20
V_HOXD9_Q2_M01834 TRANSFAC - 50482484 50482493 8.0E-06 AGACATTAAA 10
V_IRF7_01_M00453 TRANSFAC - 50478655 50478672 7.0E-06 TACAAATGGGAAAGCTGA 18
V_FREAC2_01_M00290 TRANSFAC - 50482857 50482872 3.0E-06 TAAATGTAAACAGAGC 16
V_ALPHACP1_01_M00687 TRANSFAC - 50482451 50482461 6.0E-06 CCTCCAATCAG 11
V_HAND1E47_01_M00222 TRANSFAC + 50478578 50478593 1.0E-06 AAGGGTATCTGGAATC 16
V_GATA1_01_M00075 TRANSFAC + 50478705 50478714 6.0E-06 CCTGATAGTT 10
V_TAL1_01_M01591 TRANSFAC + 50481881 50481893 7.0E-06 CCTCCTTCTCTAT 13
V_IPF1_05_M01255 TRANSFAC - 50482482 50482493 0.0E+00 AGACATTAAAAT 12
V_IPF1_05_M01255 TRANSFAC - 50482633 50482644 2.0E-06 TAACATTAAAAA 12
V_OCT2_01_M01368 TRANSFAC - 50482864 50482879 7.0E-06 TGGAATGTAAATGTAA 16
V_AREB6_02_M00413 TRANSFAC + 50478641 50478652 7.0E-06 ATTCACCTGTGA 12
V_FOXL1_04_M02753 TRANSFAC - 50482856 50482872 1.0E-06 TAAATGTAAACAGAGCA 17
V_ZSCAN4_04_M02942 TRANSFAC - 50482016 50482031 7.0E-06 CATTGCACATAACTAA 16
V_HNF4_Q6_01_M01031 TRANSFAC - 50476576 50476589 3.0E-06 AGTGCAAAGGTTAC 14
V_HNF4_Q6_01_M01031 TRANSFAC - 50478624 50478637 4.0E-06 TTGGCAAAGGTCAA 14
V_ERR1_Q2_M00511 TRANSFAC - 50482564 50482577 9.0E-06 ACCTAGAGGTCAAT 14
V_GEN_INI2_B_M00313 TRANSFAC + 50482046 50482053 1.0E-05 CCTCATTT 8
V_ZBTB4_04_M02929 TRANSFAC - 50481959 50481974 7.0E-06 GAATCACAGGCAATAA 16
V_NKX22_01_M00485 TRANSFAC + 50482359 50482368 1.0E-05 TTAAGTCCTT 10
V_ZBTB12_03_M02824 TRANSFAC + 50482091 50482107 9.0E-06 TATGTGTTCTAGGCTGC 17
V_SPIC_02_M02077 TRANSFAC - 50482839 50482848 6.0E-06 AGAGGAAGTC 10
V_FOXA2_03_M02260 TRANSFAC + 50482861 50482872 2.0E-06 TGTTTACATTTA 12
V_RSRFC4_01_M00026 TRANSFAC + 50481806 50481821 2.0E-06 CTCTTATTTTTAGCTG 16
V_ZABC1_01_M01306 TRANSFAC - 50481837 50481844 1.0E-05 ATTCCAAC 8
V_SIX4_01_M01374 TRANSFAC - 50481912 50481928 8.0E-06 CAGAATGACACCACCAG 17
V_ZFP281_01_M01597 TRANSFAC + 50479449 50479459 9.0E-06 TGGGGGTTGGG 11
V_CEBPB_Q6_M01896 TRANSFAC - 50482910 50482919 2.0E-06 TTGTGCAATC 10
V_RARA_03_M02787 TRANSFAC - 50478621 50478636 5.0E-06 TGGCAAAGGTCAACCA 16
V_TCFAP2A_03_M02819 TRANSFAC + 50482051 50482065 4.0E-06 TTTCCCTTGGGCAAA 15
V_DMRT2_01_M01147 TRANSFAC - 50478672 50478687 2.0E-06 CAGTTTATTCCATTTT 16
V_ZFP281_04_M02831 TRANSFAC - 50479447 50479461 7.0E-06 CCCCCAACCCCCACC 15
V_NUR77_Q5_M01217 TRANSFAC + 50478624 50478633 1.0E-06 TTGACCTTTG 10
V_ERR1_Q2_01_M02093 TRANSFAC - 50478622 50478632 8.0E-06 AAAGGTCAACC 11
V_SP1_Q2_01_M00933 TRANSFAC - 50479093 50479102 4.0E-06 CCCCGCCCCC 10
V_SP1_Q2_01_M00933 TRANSFAC - 50479362 50479371 4.0E-06 CCCCGCCCCC 10
V_MEF2A_05_M01301 TRANSFAC + 50481807 50481818 3.0E-06 TCTTATTTTTAG 12
V_HNF4_01_M00134 TRANSFAC - 50476574 50476592 2.0E-06 GACAGTGCAAAGGTTACAA 19
V_SP1_Q4_01_M00932 TRANSFAC + 50479361 50479373 1.0E-06 CGGGGGCGGGGCC 13
V_TAACC_B_M00331 TRANSFAC - 50481942 50481964 7.0E-06 CAATAAGCAGCCAGAACAAAAAC 23
V_SOX5_04_M02910 TRANSFAC - 50482892 50482906 2.0E-06 CATCATAATAAAGGA 15
V_COUP_DR1_Q6_M00765 TRANSFAC + 50478625 50478637 3.0E-06 TGACCTTTGCCAA 13
V_BRCA_01_M01082 TRANSFAC + 50482118 50482125 1.0E-05 TTCTGTTG 8
V_FOXK1_03_M02752 TRANSFAC - 50482856 50482872 1.0E-06 TAAATGTAAACAGAGCA 17
V_PAX4_04_M00380 TRANSFAC - 50478509 50478538 7.0E-06 AATAAGTACCTCACGTGGGAACTTCATCCT 30
V_SMAD1_01_M01590 TRANSFAC - 50481942 50481953 7.0E-06 CAGAACAAAAAC 12
V_PPARA_01_M00242 TRANSFAC - 50476577 50476596 9.0E-06 CTGAGACAGTGCAAAGGTTA 20
V_SPIB_03_M02076 TRANSFAC - 50482839 50482848 7.0E-06 AGAGGAAGTC 10
V_TR4_03_M01782 TRANSFAC - 50476577 50476589 6.0E-06 AGTGCAAAGGTTA 13
V_HOXC9_01_M01416 TRANSFAC + 50475039 50475054 9.0E-06 CTAGGTCATTAAGCAC 16
Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns.
Developed at the Institute for Systems Biology in the Baliga Lab.
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