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LRTM2


EntrezDescriptionChrom.StrandPromoter
(Start - Stop)
TSS
654429 leucine-rich repeats and transmembrane domains 2 chr12 +1924432 - 1929932 1929432

Transcription Factor Binding Sites

 
Download all TFBS in the LRTM2 promoter
 
MotifSourceStrandStartStop PValueMatch
Sequence
Overlap w/
Footprints
FOXO4_forkhead_DBD_dimeric_14_1 SELEX + 1925119 1925132 2.0E-06 GGAAATATATTTAC 14
FOXO4_forkhead_DBD_dimeric_14_1 SELEX - 1925119 1925132 3.0E-06 GTAAATATATTTCC 14
Myc_MA0147.1 JASPAR + 1931138 1931147 9.0E-06 AGCACGTGGA 10
BARX1_homeodomain_DBD_dimeric_17_1 SELEX - 1925017 1925033 3.0E-06 CACTTAAATCCCCATTT 17
ZNF75A_C2H2_DBD_monomeric_12_1 SELEX + 1931217 1931228 1.0E-06 GCTTTTCCCACC 12
EWSR1-FLI1_MA0149.1 JASPAR - 1929696 1929713 1.0E-06 GGAGAGAGGGAAGAAAGG 18
SP1_MA0079.2 JASPAR - 1931119 1931128 7.0E-06 CCCCGCCCCC 10
NFAT5_NFAT_DBD_dimeric_14_1 SELEX - 1925229 1925242 1.0E-06 GTGGAAAAGCACAA 14
ATF4_bZIP_DBD_dimeric_13_1 SELEX - 1925180 1925192 5.0E-06 ATATGATGCAAGC 13
Atf4_bZIP_DBD_dimeric_14_1 SELEX - 1925180 1925193 1.0E-06 AATATGATGCAAGC 14
NFATC1_NFAT_full_dimeric_20_1 SELEX + 1925116 1925135 7.0E-06 CACGGAAATATATTTACCAG 20
NFATC1_NFAT_full_dimeric_20_1 SELEX - 1925117 1925136 8.0E-06 ACTGGTAAATATATTTCCGT 20
ID4_bHLH_DBD_dimeric_10_1 SELEX - 1929400 1929409 3.0E-06 TGCACCTGTC 10
FOXO3_forkhead_full_dimeric_14_1 SELEX + 1925119 1925132 4.0E-06 GGAAATATATTTAC 14
ELF5_MA0136.1 JASPAR + 1925047 1925055 9.0E-06 AACTTCCTT 9
FOXO6_forkhead_DBD_dimeric_14_1 SELEX + 1925119 1925132 4.0E-06 GGAAATATATTTAC 14
FOXO1_forkhead_DBD_dimeric_14_1 SELEX + 1925119 1925132 2.0E-06 GGAAATATATTTAC 14
FOXO1_forkhead_DBD_dimeric_14_1 SELEX - 1925119 1925132 1.0E-06 GTAAATATATTTCC 14
V_NFKB_C_M00208 TRANSFAC + 1928481 1928492 8.0E-06 CGGGACTCCCCA 12
V_FREAC7_01_M00293 TRANSFAC - 1928402 1928417 9.0E-06 TCCCCATAAACATACT 16
V_MYOD_Q6_M00184 TRANSFAC - 1929400 1929409 7.0E-06 TGCACCTGTC 10
V_ZFP410_04_M02936 TRANSFAC - 1928408 1928424 3.0E-06 TCCCACCTCCCCATAAA 17
V_EVI1_04_M00081 TRANSFAC + 1928868 1928882 4.0E-06 TGATTGGTTAAGAAA 15
V_ESE1_01_M01977 TRANSFAC + 1925116 1925125 8.0E-06 CACGGAAATA 10
V_EGR_Q6_M00807 TRANSFAC + 1931117 1931127 6.0E-06 GTGGGGGCGGG 11
V_ZFP740_03_M02834 TRANSFAC + 1931221 1931236 7.0E-06 TTCCCACCCCCACCTC 16
V_SP1_03_M02281 TRANSFAC - 1931119 1931128 7.0E-06 CCCCGCCCCC 10
V_SP1_02_M01303 TRANSFAC + 1931120 1931130 3.0E-06 GGGGCGGGGAG 11
V_NFY_Q6_01_M00775 TRANSFAC - 1928868 1928880 0.0E+00 TCTTAACCAATCA 13
V_TGIF2_01_M01407 TRANSFAC - 1931351 1931366 8.0E-06 AAGCTTCTGTCAAACC 16
V_MYC_01_M02250 TRANSFAC + 1931138 1931147 9.0E-06 AGCACGTGGA 10
V_TGIF_02_M01346 TRANSFAC - 1929626 1929642 7.0E-06 GGGAGTGACAGCTGGGG 17
V_TBX18_01_M01262 TRANSFAC - 1928345 1928363 8.0E-06 GGGCCTGAAATGCTCTCCT 19
V_CMYC_01_M01145 TRANSFAC - 1931137 1931148 8.0E-06 CTCCACGTGCTC 12
MYC_MAX_MA0059.1 JASPAR + 1931137 1931147 5.0E-06 GAGCACGTGGA 11
V_MAZ_Q6_01_M02023 TRANSFAC + 1931119 1931132 2.0E-06 GGGGGCGGGGAGGG 14
V_ELF5_01_M01197 TRANSFAC - 1925047 1925057 0.0E+00 ATAAGGAAGTT 11
V_IRF3_06_M02871 TRANSFAC - 1929691 1929704 1.0E-06 GAAGAAAGGGGCGA 14
V_NFKAPPAB50_01_M00051 TRANSFAC - 1928482 1928491 8.0E-06 GGGGAGTCCC 10
V_STAT4_Q5_M02117 TRANSFAC - 1925741 1925750 4.0E-06 TTACAGGAAA 10
V_TGIF1_01_M03111 TRANSFAC - 1929626 1929642 7.0E-06 GGGAGTGACAGCTGGGG 17
V_AP1_Q2_01_M00924 TRANSFAC - 1925131 1925142 3.0E-06 TGACTCACTGGT 12
V_SP4_Q5_M01273 TRANSFAC - 1931119 1931129 9.0E-06 TCCCCGCCCCC 11
V_EHF_03_M02052 TRANSFAC + 1925116 1925125 9.0E-06 CACGGAAATA 10
V_MYOD_Q6_02_M02100 TRANSFAC + 1929629 1929637 4.0E-06 CAGCTGTCA 9
V_T3R_01_M00239 TRANSFAC - 1925565 1925580 9.0E-06 CTTTCAGGTCATGACA 16
V_CAAT_C_M00200 TRANSFAC - 1928392 1928416 7.0E-06 CCCCATAAACATACTTCCTGCTTCT 25
V_ZBTB4_04_M02929 TRANSFAC - 1925126 1925141 2.0E-06 GACTCACTGGTAAATA 16
V_ESE1_02_M02055 TRANSFAC + 1925116 1925125 7.0E-06 CACGGAAATA 10
V_ZFP281_01_M01597 TRANSFAC + 1931118 1931128 6.0E-06 TGGGGGCGGGG 11
V_ZFP281_04_M02831 TRANSFAC + 1931220 1931234 5.0E-06 TTTCCCACCCCCACC 15
V_EWSR1FLI1_01_M02252 TRANSFAC - 1929696 1929713 1.0E-06 GGAGAGAGGGAAGAAAGG 18
V_SP1_Q2_01_M00933 TRANSFAC - 1931119 1931128 4.0E-06 CCCCGCCCCC 10
V_ARP1_01_M00155 TRANSFAC - 1928469 1928484 1.0E-05 CCCGCCTCTGACCTCT 16
V_UF1H3BETA_Q6_M01068 TRANSFAC + 1931116 1931129 3.0E-06 GGTGGGGGCGGGGA 14
V_UF1H3BETA_Q6_M01068 TRANSFAC - 1931221 1931234 7.0E-06 GGTGGGGGTGGGAA 14
V_ELF5_04_M02241 TRANSFAC + 1925047 1925055 9.0E-06 AACTTCCTT 9
V_STAT1_Q6_M01823 TRANSFAC - 1925741 1925750 4.0E-06 TTACAGGAAA 10
V_ESE1_Q3_M01214 TRANSFAC + 1925116 1925125 7.0E-06 CACGGAAATA 10
Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns.
Developed at the Institute for Systems Biology in the Baliga Lab.
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