Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

ZG16 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 653808 zymogen granule protein 16 chr16 + 29784560 - 29790060 29789560 Transcription Factor Binding Sites   Download all TFBS in the ZG16 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints POU4F2_POU_full_monomeric_16_1 SELEX - 29787334 29787349 5.0E-06 CTCAATTATAAATGAC 16 NFE2_bZIP_DBD_dimeric_11_1 SELEX + 29787272 29787282 3.0E-06 GATGAGTCATT 11 NFE2_bZIP_DBD_dimeric_11_1 SELEX - 29787272 29787282 0.0E+00 AATGACTCATC 11 NFIA_NFI_full_dimeric_15_1 SELEX + 29791065 29791079 5.0E-06 TGGGCAAGATGCCAG 15 PKNOX1_MEIS_DBD_dimeric_12_1 SELEX + 29790995 29791006 5.0E-06 TCACATCTGTCA 12 PKNOX1_MEIS_DBD_dimeric_12_1 SELEX - 29790995 29791006 4.0E-06 TGACAGATGTGA 12 PDX1_homeodomain_DBD_dimeric_18_1 SELEX + 29787341 29787358 8.0E-06 ATAATTGAGAGCACTTAT 18 EWSR1-FLI1_MA0149.1 JASPAR + 29787152 29787169 5.0E-06 GAGGGGAAGGGAGGAGTG 18 NFIX_NFI_full_dimeric_15_2 SELEX + 29791065 29791079 9.0E-06 TGGGCAAGATGCCAG 15 NFIX_NFI_full_dimeric_15_2 SELEX - 29791065 29791079 3.0E-06 CTGGCATCTTGCCCA 15 Esrrb_MA0141.1 JASPAR - 29787134 29787145 5.0E-06 TCTCCAAGGTCA 12 Pknox2_MEIS_DBD_dimeric_12_1 SELEX + 29790995 29791006 1.0E-05 TCACATCTGTCA 12 Pknox2_MEIS_DBD_dimeric_12_1 SELEX - 29790995 29791006 6.0E-06 TGACAGATGTGA 12 TGIF2_MEIS_DBD_dimeric_12_1 SELEX + 29790995 29791006 8.0E-06 TCACATCTGTCA 12 TGIF2_MEIS_DBD_dimeric_12_1 SELEX - 29790995 29791006 5.0E-06 TGACAGATGTGA 12 ZNF238_C2H2_full_monomeric_13_1 SELEX - 29790995 29791007 1.0E-05 ATGACAGATGTGA 13 RORA_nuclearreceptor_DBD_dimeric_19_1 SELEX + 29785068 29785086 1.0E-06 ACGTTGGGTTATTAGGTCA 19 POU4F3_POU_DBD_monomeric_16_1 SELEX - 29787334 29787349 4.0E-06 CTCAATTATAAATGAC 16 Meis3_MEIS_DBD_dimeric_12_1 SELEX + 29790995 29791006 2.0E-06 TCACATCTGTCA 12 Meis3_MEIS_DBD_dimeric_12_1 SELEX - 29790995 29791006 3.0E-06 TGACAGATGTGA 12 SOX9_HMG_full_dimeric_16_3 SELEX - 29787323 29787338 1.0E-05 ATGACTAGTCAGGCAT 16 NR2F1_nuclearreceptor_DBD_dimeric_16_1 SELEX + 29785072 29785087 2.0E-06 TGGGTTATTAGGTCAT 16 TEAD3_TEA_DBD_dimeric_17_1 SELEX + 29790962 29790978 1.0E-06 AGATTCTTTGAATTCCT 17 TGIF2LX_MEIS_full_dimeric_12_1 SELEX + 29790995 29791006 5.0E-06 TCACATCTGTCA 12 TGIF2LX_MEIS_full_dimeric_12_1 SELEX - 29790995 29791006 5.0E-06 TGACAGATGTGA 12 NFIB_NFI_full_dimeric_15_1 SELEX + 29791065 29791079 3.0E-06 TGGGCAAGATGCCAG 15 JDP2_bZIP_full_dimeric_9_1 SELEX + 29787273 29787281 4.0E-06 ATGAGTCAT 9 JDP2_bZIP_full_dimeric_9_1 SELEX - 29787273 29787281 2.0E-06 ATGACTCAT 9 TEAD1_TEA_full_dimeric_17_1 SELEX + 29790962 29790978 1.0E-06 AGATTCTTTGAATTCCT 17 Meis2_MEIS_DBD_dimeric_12_1 SELEX + 29790995 29791006 9.0E-06 TCACATCTGTCA 12 Meis2_MEIS_DBD_dimeric_12_1 SELEX - 29790995 29791006 2.0E-06 TGACAGATGTGA 12 Nr2f6_nuclearreceptor_DBD_dimeric_15_1 SELEX + 29785072 29785086 1.0E-05 TGGGTTATTAGGTCA 15 RARA_nuclearreceptor_full_dimeric_15_1 SELEX + 29785072 29785086 2.0E-06 TGGGTTATTAGGTCA 15 TGIF1_MEIS_DBD_dimeric_12_1 SELEX + 29790995 29791006 5.0E-06 TCACATCTGTCA 12 TGIF1_MEIS_DBD_dimeric_12_1 SELEX - 29790995 29791006 5.0E-06 TGACAGATGTGA 12 POU4F1_POU_DBD_monomeric_14_1 SELEX - 29787336 29787349 6.0E-06 CTCAATTATAAATG 14 V_DBX1_01_M01483 TRANSFAC + 29787332 29787348 9.0E-06 TAGTCATTTATAATTGA 17 V_BTEB3_Q5_M01865 TRANSFAC + 29787156 29787168 5.0E-06 GGAAGGGAGGAGT 13 V_NF1A_Q6_M02103 TRANSFAC + 29791065 29791080 7.0E-06 TGGGCAAGATGCCAGG 16 V_RORA1_01_M00156 TRANSFAC + 29785075 29785087 9.0E-06 GTTATTAGGTCAT 13 V_MAFB_05_M02775 TRANSFAC + 29787120 29787136 6.0E-06 GGATGTGCTGACACTGA 17 V_LRH1_Q5_01_M02098 TRANSFAC - 29787134 29787144 7.0E-06 CTCCAAGGTCA 11 V_IK_Q5_M01169 TRANSFAC + 29791016 29791025 3.0E-06 TTTGGGAGGC 10 V_RORA_Q4_M01138 TRANSFAC + 29785076 29785086 1.0E-06 TTATTAGGTCA 11 V_RP58_01_M00532 TRANSFAC + 29785054 29785065 4.0E-06 TAAGCATCTGGA 12 V_SP1_02_M01303 TRANSFAC + 29787306 29787316 5.0E-06 GGGGTGGGGTG 11 V_LYF1_01_M00141 TRANSFAC + 29791016 29791024 9.0E-06 TTTGGGAGG 9 V_SOX21_03_M02803 TRANSFAC + 29787334 29787349 5.0E-06 GTCATTTATAATTGAG 16 V_SOX21_03_M02803 TRANSFAC - 29787334 29787349 6.0E-06 CTCAATTATAAATGAC 16 V_AP1_Q6_M00174 TRANSFAC - 29787272 29787282 5.0E-06 AATGACTCATC 11 V_BACH1_01_M00495 TRANSFAC + 29787270 29787284 2.0E-06 GGGATGAGTCATTGG 15 V_TGIF_02_M01346 TRANSFAC - 29790995 29791011 5.0E-06 TGTAATGACAGATGTGA 17 V_AP1_Q6_01_M00925 TRANSFAC - 29787273 29787281 4.0E-06 ATGACTCAT 9 V_PAX2_01_M00098 TRANSFAC + 29787330 29787348 0.0E+00 ACTAGTCATTTATAATTGA 19 V_JUNDM2_04_M02876 TRANSFAC + 29787269 29787284 8.0E-06 TGGGATGAGTCATTGG 16 V_ERR1_Q3_M01841 TRANSFAC + 29787131 29787145 1.0E-06 CACTGACCTTGGAGA 15 V_AP1_C_M00199 TRANSFAC + 29787273 29787281 8.0E-06 ATGAGTCAT 9 V_AP1_01_M00517 TRANSFAC + 29787271 29787283 8.0E-06 GGATGAGTCATTG 13 V_AP1_01_M00517 TRANSFAC - 29787271 29787283 5.0E-06 CAATGACTCATCC 13 V_TGIF1_01_M03111 TRANSFAC - 29790995 29791011 5.0E-06 TGTAATGACAGATGTGA 17 V_SF1_Q6_01_M01132 TRANSFAC + 29787134 29787142 7.0E-06 TGACCTTGG 9 V_LRH1_Q5_M01142 TRANSFAC + 29787133 29787144 6.0E-06 CTGACCTTGGAG 12 V_AP1_Q4_01_M00926 TRANSFAC + 29787274 29787281 1.0E-05 TGAGTCAT 8 V_MEIS1_01_M00419 TRANSFAC - 29790998 29791009 1.0E-06 TAATGACAGATG 12 V_AIRE_01_M00999 TRANSFAC - 29791114 29791139 5.0E-06 TTTTTCTTCGGTAGAGATGGGGTCTT 26 V_BDP1_01_M01796 TRANSFAC + 29791089 29791100 9.0E-06 GGATTTAAACCA 12 V_FRA1_Q5_M01267 TRANSFAC + 29787274 29787281 1.0E-05 TGAGTCAT 8 V_ETS1_B_M00339 TRANSFAC + 29787117 29787131 8.0E-06 GCAGGATGTGCTGAC 15 V_TBX22_01_M01195 TRANSFAC + 29787163 29787181 1.0E-06 AGGAGTGAACGTGGAATCT 19 V_EWSR1FLI1_01_M02252 TRANSFAC + 29787152 29787169 5.0E-06 GAGGGGAAGGGAGGAGTG 18 V_HOXD8_01_M01432 TRANSFAC - 29787332 29787348 3.0E-06 TCAATTATAAATGACTA 17 V_IPF1_Q4_01_M01013 TRANSFAC + 29791000 29791014 2.0E-06 TCTGTCATTACAATG 15 V_SOX5_04_M02910 TRANSFAC + 29787337 29787351 5.0E-06 ATTTATAATTGAGAG 15 V_BRF1_01_M01747 TRANSFAC - 29791088 29791100 5.0E-06 TGGTTTAAATCCC 13 V_ATATA_B_M00311 TRANSFAC + 29785049 29785058 8.0E-06 CTACATAAGC 10

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.