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SLC6A1 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 6529 solute carrier family 6 (neurotransmitter transporter, GABA), member 1 chr3 + 11029419 - 11034919 11034419 Transcription Factor Binding Sites   Download all TFBS in the SLC6A1 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints TBX20_TBX_full_monomeric_11_1 SELEX - 11030854 11030864 8.0E-06 TAGGTGTGAGA 11 ZNF435_C2H2_full_dimeric_18_1 SELEX + 11038507 11038524 5.0E-06 ACAGTTTACAAAGCACTT 18 EWSR1-FLI1_MA0149.1 JASPAR + 11033920 11033937 4.0E-06 GGAGAAAAGCCAGGAGGG 18 EWSR1-FLI1_MA0149.1 JASPAR + 11034096 11034113 1.0E-06 GAGAGGGAGGGAGGAAGA 18 EWSR1-FLI1_MA0149.1 JASPAR + 11034100 11034117 6.0E-06 GGGAGGGAGGAAGAGAGG 18 Esrrb_MA0141.1 JASPAR + 11030998 11031009 3.0E-06 CCCTCAAGGTCA 12 FOXD2_forkhead_DBD_dimeric_14_1 SELEX + 11029877 11029890 9.0E-06 CACAAATATTTAAA 14 NR2F1_MA0017.1 JASPAR + 11029957 11029970 8.0E-06 TGAACTTAGGTCTT 14 Ar_MA0007.1 JASPAR + 11035564 11035585 4.0E-06 ATGATAACACCACGTTCTTTCC 22 ESRRG_nuclearreceptor_full_monomeric_10_1 SELEX + 11031001 11031010 1.0E-06 TCAAGGTCAA 10 ZSCAN4_C2H2_full_monomeric_15_1 SELEX + 11033706 11033720 6.0E-06 TACACACACTCCCAG 15 TBX2_TBX_full_monomeric_11_1 SELEX - 11030854 11030864 8.0E-06 TAGGTGTGAGA 11 PITX1_homeodomain_full_monomeric_9_1 SELEX + 11030909 11030917 5.0E-06 TTTAATCCA 9 Esrra_nuclearreceptor_DBD_monomeric_11_1 SELEX + 11031000 11031010 2.0E-06 CTCAAGGTCAA 11 ESRRB_nuclearreceptor_DBD_monomeric_11_1 SELEX + 11031001 11031011 2.0E-06 TCAAGGTCAAG 11 IRF3_IRF_full_trimeric_21_1 SELEX + 11033866 11033886 7.0E-06 CGCAGAGAGAAACGGAAAGGA 21 NHLH1_bHLH_full_dimeric_10_1 SELEX - 11034260 11034269 9.0E-06 CGCAGCTGCC 10 NFIA_NFI_full_monomeric_10_1 SELEX - 11038452 11038461 5.0E-06 ATTGCCAAGT 10 V_HNF3B_01_M00131 TRANSFAC - 11029883 11029897 1.0E-05 CTGAATGTTTAAATA 15 V_TCF3_01_M01594 TRANSFAC - 11029945 11029957 9.0E-06 ATTTTGTTATTCT 13 V_AR_02_M00953 TRANSFAC - 11030967 11030993 5.0E-06 TGGGGAGCCACTGAGTGTTCTGGAGCA 27 V_ATF5_01_M01295 TRANSFAC + 11034406 11034416 7.0E-06 CCTCTCCCTTC 11 V_HMGIY_Q3_M01010 TRANSFAC - 11029948 11029962 5.0E-06 AGTTCATTTTGTTAT 15 V_HMGIY_Q3_M01010 TRANSFAC + 11035542 11035556 1.0E-05 AGGAGAATTTTTTAA 15 V_ERR3_Q2_01_M02094 TRANSFAC + 11030999 11031011 2.0E-06 CCTCAAGGTCAAG 13 V_LRH1_Q5_01_M02098 TRANSFAC + 11030999 11031009 9.0E-06 CCTCAAGGTCA 11 V_AML3_Q6_M01856 TRANSFAC + 11035535 11035542 1.0E-05 AACCACAA 8 V_FOXJ1_04_M02854 TRANSFAC + 11029943 11029957 6.0E-06 ACAGAATAACAAAAT 15 V_FOXJ1_04_M02854 TRANSFAC + 11035562 11035576 5.0E-06 AAATGATAACACCAC 15 V_IRF2_Q6_M01882 TRANSFAC + 11033872 11033887 1.0E-05 GAGAAACGGAAAGGAC 16 V_SP1_02_M01303 TRANSFAC + 11034088 11034098 5.0E-06 GGGGTGGGGAG 11 V_WT1_Q6_01_M02036 TRANSFAC - 11034303 11034312 4.0E-06 CGCCCCCGCC 10 V_ELF4_04_M02850 TRANSFAC - 11035544 11035560 5.0E-06 GCTTTTAAAAAATTCTC 17 V_FOXA2_02_M02853 TRANSFAC + 11029944 11029958 2.0E-06 CAGAATAACAAAATG 15 V_ARID5A_03_M02736 TRANSFAC + 11029879 11029892 2.0E-06 CAAATATTTAAACA 14 V_COUP_01_M00158 TRANSFAC + 11029957 11029970 8.0E-06 TGAACTTAGGTCTT 14 V_IRF2_01_M00063 TRANSFAC - 11030934 11030946 6.0E-06 GAAAGCTGAAACT 13 V_AML2_01_M01759 TRANSFAC + 11035535 11035542 1.0E-05 AACCACAA 8 V_KROX_Q6_M00982 TRANSFAC - 11034301 11034314 1.0E-06 CCCGCCCCCGCCCA 14 V_FOXK1_04_M02856 TRANSFAC + 11035561 11035575 4.0E-06 CAAATGATAACACCA 15 V_IRF3_Q3_M01279 TRANSFAC - 11034218 11034230 4.0E-06 TCCTTTTCCCTTC 13 V_MAZ_Q6_01_M02023 TRANSFAC + 11034087 11034100 7.0E-06 GGGGGTGGGGAGAG 14 V_EGR1_Q6_M01873 TRANSFAC + 11034304 11034313 4.0E-06 GCGGGGGCGG 10 V_SREBP_Q6_M01168 TRANSFAC + 11033735 11033749 2.0E-06 CTGGTCACCCCAGGC 15 V_ASCL2_03_M02737 TRANSFAC - 11034256 11034272 6.0E-06 CTCCGCAGCTGCCTCTT 17 V_AR_04_M01201 TRANSFAC - 11035567 11035581 7.0E-06 AGAACGTGGTGTTAT 15 V_EVI1_Q3_M02002 TRANSFAC - 11035467 11035475 6.0E-06 TTTCTTGTC 9 V_NKX3A_01_M00451 TRANSFAC + 11029844 11029855 7.0E-06 GTTTAAGTATTG 12 V_HNF4A_Q6_01_M02016 TRANSFAC - 11029954 11029968 7.0E-06 GACCTAAGTTCATTT 15 V_TBX5_01_M01019 TRANSFAC - 11030854 11030865 4.0E-06 GTAGGTGTGAGA 12 V_SF1_Q6_01_M01132 TRANSFAC - 11031001 11031009 3.0E-06 TGACCTTGA 9 V_TFIII_Q6_M00706 TRANSFAC + 11034097 11034105 6.0E-06 AGAGGGAGG 9 V_GCNF_01_M00526 TRANSFAC + 11031000 11031017 5.0E-06 CTCAAGGTCAAGACCCAA 18 V_ZFP105_04_M02931 TRANSFAC - 11029877 11029893 2.0E-06 ATGTTTAAATATTTGTG 17 V_GATA1_05_M00346 TRANSFAC + 11035563 11035572 5.0E-06 AATGATAACA 10 V_FOXL1_04_M02753 TRANSFAC + 11029881 11029897 8.0E-06 AATATTTAAACATTCAG 17 V_GATA3_02_M00350 TRANSFAC - 11029970 11029979 3.0E-06 GGAGATAATA 10 V_T3R_Q6_M00963 TRANSFAC - 11033882 11033890 7.0E-06 CCTGTCCTT 9 V_EBNA1_01_M01745 TRANSFAC - 11033775 11033790 2.0E-06 GGCAGCGTCTGCTGCC 16 V_ERR2_01_M01589 TRANSFAC + 11031001 11031012 6.0E-06 TCAAGGTCAAGA 12 V_GATA6_01_M00462 TRANSFAC + 11035563 11035572 9.0E-06 AATGATAACA 10 V_DOBOX5_01_M01463 TRANSFAC + 11031460 11031476 8.0E-06 AAATGGGATTAGTCAGT 17 V_ASCL2_04_M02841 TRANSFAC - 11034085 11034100 9.0E-06 CTCTCCCCACCCCCTC 16 V_T3RBETA_Q6_01_M02119 TRANSFAC + 11034204 11034220 4.0E-06 AGGGGAGAGGAGGTGAA 17 V_ESRRA_03_M02748 TRANSFAC + 11030998 11031014 9.0E-06 CCCTCAAGGTCAAGACC 17 V_ZFP281_01_M01597 TRANSFAC + 11034086 11034096 5.0E-06 AGGGGGTGGGG 11 V_TBX5_Q5_M01044 TRANSFAC + 11030855 11030864 4.0E-06 CTCACACCTA 10 V_IRF1_Q6_01_M01881 TRANSFAC + 11030933 11030946 7.0E-06 CAGTTTCAGCTTTC 14 V_EWSR1FLI1_01_M02252 TRANSFAC + 11033920 11033937 4.0E-06 GGAGAAAAGCCAGGAGGG 18 V_EWSR1FLI1_01_M02252 TRANSFAC + 11034096 11034113 1.0E-06 GAGAGGGAGGGAGGAAGA 18 V_EWSR1FLI1_01_M02252 TRANSFAC + 11034100 11034117 6.0E-06 GGGAGGGAGGAAGAGAGG 18 V_SMAD3_Q6_M00701 TRANSFAC - 11033982 11033990 1.0E-05 TGTCTGCCT 9 V_SOX2_Q6_M01272 TRANSFAC - 11029946 11029961 5.0E-06 GTTCATTTTGTTATTC 16 V_PR_02_M00957 TRANSFAC - 11030967 11030993 6.0E-06 TGGGGAGCCACTGAGTGTTCTGGAGCA 27 V_PITX2_01_M01447 TRANSFAC + 11031460 11031476 4.0E-06 AAATGGGATTAGTCAGT 17 V_UF1H3BETA_Q6_M01068 TRANSFAC + 11034084 11034097 5.0E-06 GGAGGGGGTGGGGA 14 V_STAT1_05_M01260 TRANSFAC - 11035604 11035625 1.0E-05 GCTTCCTGGGAAAGGGAATGAG 22 V_AR_01_M00481 TRANSFAC - 11035567 11035581 1.0E-05 AGAACGTGGTGTTAT 15

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.