Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

C8orf33 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 65265 chromosome 8 open reading frame 33 chr8 + 146272823 - 146278323 146277823 Transcription Factor Binding Sites   Download all TFBS in the C8orf33 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints POU5F1P1_POU_DBD_monomeric_9_1 SELEX + 146282751 146282759 6.0E-06 TATTCAAAT 9 POU2F3_POU_DBD_monomeric_9_1 SELEX + 146282751 146282759 6.0E-06 TATTCAAAT 9 SOX8_HMG_full_dimeric_17_1 SELEX + 146276655 146276671 7.0E-06 AATAACTATCAGTGATG 17 SOX8_HMG_full_dimeric_17_1 SELEX - 146276655 146276671 2.0E-06 CATCACTGATAGTTATT 17 Pou2f2_POU_DBD_monomeric_9_1 SELEX + 146282751 146282759 4.0E-06 TATTCAAAT 9 TCF7L1_HMG_full_monomeric_12_1 SELEX - 146277434 146277445 2.0E-06 AAAGTTCAAAGC 12 LEF1_HMG_DBD_monomeric_15_1 SELEX - 146277431 146277445 9.0E-06 AAAGTTCAAAGCTCT 15 Foxc1_forkhead_DBD_dimeric_11_1 SELEX + 146276652 146276662 9.0E-06 GTAAATAACTA 11 SOX14_HMG_DBD_dimeric_13_1 SELEX + 146276657 146276669 8.0E-06 TAACTATCAGTGA 13 Tcf7_HMG_DBD_monomeric_12_1 SELEX - 146277434 146277445 2.0E-06 AAAGTTCAAAGC 12 RARG_nuclearreceptor_DBD_dimeric_17_1 SELEX - 146276681 146276697 4.0E-06 AAGGTCTCGAAGGGTTA 17 ZNF282_C2H2_DBD_monomeric_17_1 SELEX + 146282796 146282812 9.0E-06 CTTTCCTCCTACACAGA 17 POU2F1_POU_DBD_monomeric_12_1 SELEX + 146282749 146282760 6.0E-06 ACTATTCAAATT 12 SOX18_HMG_full_dimeric_15_3 SELEX + 146276656 146276670 7.0E-06 ATAACTATCAGTGAT 15 FOXC1_forkhead_DBD_dimeric_13_1 SELEX - 146277371 146277383 4.0E-06 AAGCAAGTAAACA 13 V_FOXP1_01_M00987 TRANSFAC - 146278170 146278189 5.0E-06 TTCTTATTCTTTTGTTTTTT 20 V_FOXP1_01_M00987 TRANSFAC - 146278173 146278192 2.0E-06 TTCTTCTTATTCTTTTGTTT 20 V_DEC2_Q2_M01843 TRANSFAC + 146277361 146277370 9.0E-06 GCTCACGTGC 10 V_EBF_Q6_M00977 TRANSFAC + 146282507 146282517 4.0E-06 CTCCCTTGAGA 11 V_HSF1_Q6_M01023 TRANSFAC - 146282592 146282608 1.0E-05 ATTCTAGCCAAGTCTGA 17 V_BACH2_01_M00490 TRANSFAC + 146276594 146276604 2.0E-06 CGTGAGTCACC 11 V_ZFX_01_M01593 TRANSFAC + 146277538 146277553 2.0E-06 CCCCAGGCCCCGCCCC 16 V_BCL6_01_M01183 TRANSFAC - 146278178 146278193 7.0E-06 TTTCTTCTTATTCTTT 16 V_SPIB_02_M02041 TRANSFAC + 146277206 146277215 7.0E-06 AACGGAAGTA 10 V_IK_Q5_M01169 TRANSFAC - 146276568 146276577 3.0E-06 TTTGGGAGGC 10 V_IK_Q5_M01169 TRANSFAC - 146277231 146277240 5.0E-06 GTTGGGAGGG 10 V_ETV3_01_M01990 TRANSFAC + 146277206 146277215 6.0E-06 AACGGAAGTA 10 V_SP1_Q6_01_M00931 TRANSFAC - 146277544 146277553 4.0E-06 GGGGCGGGGC 10 V_SP1_Q6_01_M00931 TRANSFAC - 146277625 146277634 4.0E-06 GGGGCGGGGC 10 V_POU2F3_01_M01476 TRANSFAC + 146282748 146282763 5.0E-06 TACTATTCAAATTCGG 16 V_FOXO3A_Q1_M01137 TRANSFAC + 146276651 146276662 5.0E-06 AGTAAATAACTA 12 V_PITX2_Q6_M02114 TRANSFAC - 146276582 146276591 1.0E-06 TGTAATCCCA 10 V_SP1_02_M01303 TRANSFAC - 146277640 146277650 3.0E-06 GGGGCGGGGAG 11 V_PU1_Q4_M01172 TRANSFAC + 146277304 146277322 5.0E-06 CCCTCGCTCTTCCCCATTT 19 V_LYF1_01_M00141 TRANSFAC - 146276569 146276577 9.0E-06 TTTGGGAGG 9 V_RPC155_01_M01798 TRANSFAC - 146276531 146276546 0.0E+00 TTAGGAGTTTGAGACC 16 V_SPIC_01_M02042 TRANSFAC + 146277206 146277215 3.0E-06 AACGGAAGTA 10 V_FOXO1_02_M00474 TRANSFAC + 146277367 146277380 3.0E-06 GTGCTGTTTACTTG 14 V_PET1_02_M02072 TRANSFAC + 146277206 146277215 7.0E-06 AACGGAAGTA 10 V_ERF_01_M01984 TRANSFAC + 146277206 146277215 9.0E-06 AACGGAAGTA 10 V_OLF1_01_M00261 TRANSFAC + 146282502 146282523 6.0E-06 ATAGGCTCCCTTGAGACCTGGT 22 V_SP1_Q6_M00196 TRANSFAC - 146277624 146277636 7.0E-06 GCGGGGCGGGGCG 13 V_HNF3A_01_M01261 TRANSFAC - 146277370 146277379 2.0E-06 AAGTAAACAG 10 V_MAZ_Q6_01_M02023 TRANSFAC - 146282578 146282591 8.0E-06 TTAGGAGGAAAGGA 14 V_MAZ_Q6_01_M02023 TRANSFAC - 146282794 146282807 3.0E-06 GTAGGAGGAAAGGA 14 V_ISRE_01_M00258 TRANSFAC + 146282627 146282641 6.0E-06 CAGGTTCTCTTTCTC 15 V_PET1_01_M02037 TRANSFAC + 146277206 146277215 7.0E-06 AACGGAAGTA 10 V_PPARG_03_M00528 TRANSFAC - 146277438 146277454 7.0E-06 TTCCGGATAAAAGTTCA 17 V_NR1B1_Q6_M02110 TRANSFAC - 146277436 146277445 2.0E-06 AAAGTTCAAA 10 V_SP4_Q5_M01273 TRANSFAC + 146277625 146277635 2.0E-06 GCCCCGCCCCG 11 V_ELF1_Q6_M00746 TRANSFAC - 146282526 146282537 8.0E-06 GTAGGAGGAAAA 12 V_ZFP187_04_M02934 TRANSFAC + 146282514 146282529 5.0E-06 GAGACCTGGTTCTTTT 16 V_OCT2_01_M01368 TRANSFAC + 146282748 146282763 4.0E-06 TACTATTCAAATTCGG 16 V_PLAG1_01_M01778 TRANSFAC - 146277512 146277527 2.0E-06 GAGGCTGAAGAGGGGT 16 NR1H2_RXRA_MA0115.1 JASPAR - 146277429 146277445 6.0E-06 AAAGTTCAAAGCTCTCC 17 V_PITX2_Q2_M00482 TRANSFAC - 146276581 146276591 0.0E+00 TGTAATCCCAA 11 V_OCT1_07_M00248 TRANSFAC + 146282749 146282760 4.0E-06 ACTATTCAAATT 12 V_SMAD3_Q6_M00701 TRANSFAC + 146278085 146278093 3.0E-06 TGTCTGTCT 9 V_HNF3B_Q6_M02014 TRANSFAC - 146276651 146276659 6.0E-06 TTATTTACT 9 V_SPI1_02_M02043 TRANSFAC + 146277206 146277215 6.0E-06 AACGGAAGTA 10 V_NF1_Q6_M00193 TRANSFAC + 146282596 146282613 4.0E-06 ACTTGGCTAGAATCACAG 18 V_ETV3_02_M02068 TRANSFAC + 146277206 146277215 5.0E-06 AACGGAAGTA 10 V_NANOG_02_M01247 TRANSFAC + 146278172 146278191 6.0E-06 AAAACAAAAGAATAAGAAGA 20

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.