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UPF3B Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 65109 UPF3 regulator of nonsense transcripts homolog B (yeast) chrX - 118986491 - 118991991 118986991 Transcription Factor Binding Sites   Download all TFBS in the UPF3B promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints YY2_C2H2_full_dimeric_12_1 SELEX + 118987174 118987185 1.0E-06 CAATTCCGCCAT 12 TBR1_TBX_DBD_monomeric_10_1 SELEX - 118987073 118987082 2.0E-06 AGGTGTTAAA 10 SOX21_HMG_DBD_dimeric_13_2 SELEX - 118986608 118986620 5.0E-06 TGAATGGAAGTCG 13 LEF1_HMG_DBD_monomeric_15_1 SELEX - 118987299 118987313 0.0E+00 GAAGATGAAAGGATT 15 T_MA0009.1 JASPAR - 118987074 118987084 9.0E-06 CCAGGTGTTAA 11 FIGLA_bHLH_DBD_dimeric_10_1 SELEX + 118987076 118987085 4.0E-06 AACACCTGGT 10 SOX2_HMG_full_dimeric_15_1 SELEX + 118986607 118986621 9.0E-06 GCGACTTCCATTCAG 15 SP4_C2H2_full_monomeric_17_1 SELEX + 118986969 118986985 7.0E-06 AAAGCTCCGCCCCCAAC 17 Tcf7_HMG_DBD_monomeric_12_1 SELEX - 118987302 118987313 4.0E-06 GAAGATGAAAGG 12 YY2_C2H2_full_monomeric_11_1 SELEX + 118987178 118987188 2.0E-06 TCCGCCATCTT 11 TBX2_TBX_full_monomeric_11_1 SELEX - 118987073 118987083 5.0E-06 CAGGTGTTAAA 11 Sox1_HMG_DBD_dimeric_15_2 SELEX + 118986607 118986621 4.0E-06 GCGACTTCCATTCAG 15 V_FOXP1_01_M00987 TRANSFAC + 118987403 118987422 2.0E-06 CGACTTGTATTTTTTATCAT 20 V_LEF1_04_M02774 TRANSFAC + 118987298 118987314 5.0E-06 GAATCCTTTCATCTTCA 17 V_ATF5_01_M01295 TRANSFAC + 118986879 118986889 9.0E-06 TCTCTTCCTTC 11 V_HMGIY_Q3_M01010 TRANSFAC + 118987405 118987419 3.0E-06 ACTTGTATTTTTTAT 15 V_EOMES_03_M02747 TRANSFAC - 118987070 118987086 5.0E-06 AACCAGGTGTTAAAACC 17 V_NKX25_Q6_M02108 TRANSFAC - 118987186 118987196 5.0E-06 GTCACTTCAAG 11 V_YY1_Q6_M00793 TRANSFAC + 118987181 118987189 7.0E-06 GCCATCTTG 9 V_GC_01_M00255 TRANSFAC - 118986970 118986983 0.0E+00 TGGGGGCGGAGCTT 14 V_TCF3_04_M02816 TRANSFAC - 118987298 118987314 7.0E-06 TGAAGATGAAAGGATTC 17 V_SP1_Q6_M00196 TRANSFAC - 118986971 118986983 7.0E-06 TGGGGGCGGAGCT 13 V_E47_02_M00071 TRANSFAC - 118987073 118987088 0.0E+00 AAAACCAGGTGTTAAA 16 V_YY1_Q6_02_M01035 TRANSFAC + 118987178 118987188 7.0E-06 TCCGCCATCTT 11 V_TCF7_03_M02817 TRANSFAC - 118987298 118987314 3.0E-06 TGAAGATGAAAGGATTC 17 V_BRACH_01_M00150 TRANSFAC - 118987071 118987094 4.0E-06 GAAGTAAAAACCAGGTGTTAAAAC 24 V_YY1_03_M02044 TRANSFAC + 118987178 118987189 2.0E-06 TCCGCCATCTTG 12 V_TAL1_01_M01591 TRANSFAC + 118986771 118986783 6.0E-06 CCTGCTTATCTTC 13 V_TCFE2A_03_M02823 TRANSFAC - 118987072 118987088 7.0E-06 AAAACCAGGTGTTAAAA 17 V_GATA6_01_M00462 TRANSFAC - 118987414 118987423 6.0E-06 AATGATAAAA 10 V_BBX_03_M02739 TRANSFAC - 118987415 118987429 3.0E-06 GAATTCAATGATAAA 15 V_SRF_06_M02916 TRANSFAC - 118987404 118987420 8.0E-06 GATAAAAAATACAAGTC 17 V_SOX1_03_M02802 TRANSFAC - 118987417 118987432 1.0E-05 TCTGAATTCAATGATA 16

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.