Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

MRPS15 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 64960 mitochondrial ribosomal protein S15 chr1 - 36929540 - 36935040 36930040 Transcription Factor Binding Sites   Download all TFBS in the MRPS15 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints FOXO4_forkhead_DBD_dimeric_14_1 SELEX + 36931687 36931700 2.0E-06 AAAAACTAGTTTAC 14 FOXO4_forkhead_DBD_dimeric_14_1 SELEX - 36931687 36931700 4.0E-06 GTAAACTAGTTTTT 14 Rxrb_nuclearreceptor_DBD_dimeric_14_1 SELEX - 36929879 36929892 0.0E+00 GGGGTTAGAGGTCA 14 FOXF2_MA0030.1 JASPAR + 36930772 36930785 1.0E-05 AAAAGGTAAATAAA 14 FOXC2_forkhead_DBD_monomeric_12_1 SELEX + 36930774 36930785 2.0E-06 AAGGTAAATAAA 12 POU3F2_POU_DBD_monomeric_13_1 SELEX - 36931771 36931783 4.0E-06 TCTGCATACTTTA 13 FOXL1_forkhead_full_dimeric_13_1 SELEX + 36930776 36930788 6.0E-06 GGTAAATAAACCT 13 POU3F4_POU_DBD_monomeric_11_1 SELEX - 36931771 36931781 4.0E-06 TGCATACTTTA 11 RXRG_nuclearreceptor_full_dimeric_14_1 SELEX - 36929879 36929892 1.0E-06 GGGGTTAGAGGTCA 14 NR2F6_nuclearreceptor_full_dimeric_14_1 SELEX - 36929879 36929892 1.0E-06 GGGGTTAGAGGTCA 14 GRHL1_CP2_full_dimeric_12_1 SELEX + 36931688 36931699 6.0E-06 AAAACTAGTTTA 12 FOXC1_forkhead_DBD_monomeric_11_1 SELEX + 36930774 36930784 7.0E-06 AAGGTAAATAA 11 RUNX3_RUNX_DBD_dimeric_16_1 SELEX + 36931675 36931690 5.0E-06 AAACTGCAAACCAAAA 16 NR2F1_MA0017.1 JASPAR + 36929879 36929892 7.0E-06 TGACCTCTAACCCC 14 Klf4_MA0039.2 JASPAR + 36931738 36931747 5.0E-06 TGGGTGGGGC 10 BARHL2_homeodomain_full_dimeric_16_1 SELEX + 36930761 36930776 7.0E-06 TAAATCTTCTTAAAAG 16 Barhl1_homeodomain_DBD_dimeric_16_1 SELEX + 36930761 36930776 9.0E-06 TAAATCTTCTTAAAAG 16 RUNX2_RUNX_DBD_dimeric_16_1 SELEX + 36931675 36931690 5.0E-06 AAACTGCAAACCAAAA 16 Foxc1_forkhead_DBD_dimeric_11_1 SELEX + 36930777 36930787 2.0E-06 GTAAATAAACC 11 NR2F1_nuclearreceptor_DBD_dimeric_15_1 SELEX - 36929878 36929892 1.0E-06 GGGGTTAGAGGTCAC 15 ATF4_bZIP_DBD_dimeric_13_1 SELEX + 36930041 36930053 5.0E-06 TGATGACGCAACG 13 Atf4_bZIP_DBD_dimeric_14_1 SELEX + 36930040 36930053 9.0E-06 CTGATGACGCAACG 14 NR2C2_nuclearreceptor_DBD_dimeric_14_1 SELEX - 36929879 36929892 1.0E-06 GGGGTTAGAGGTCA 14 FOXC2_forkhead_DBD_dimeric_11_1 SELEX + 36930777 36930787 4.0E-06 GTAAATAAACC 11 Foxd3_MA0041.1 JASPAR + 36930810 36930821 8.0E-06 GAATGTTTTTCT 12 FOXO3_forkhead_full_dimeric_14_1 SELEX + 36931687 36931700 6.0E-06 AAAAACTAGTTTAC 14 FOXO3_forkhead_full_dimeric_14_1 SELEX - 36931687 36931700 6.0E-06 GTAAACTAGTTTTT 14 RARG_nuclearreceptor_full_dimeric_16_1 SELEX + 36931722 36931737 7.0E-06 AAGCACAAAAGGCCAT 16 RXRA_nuclearreceptor_full_dimeric_14_1 SELEX - 36929879 36929892 1.0E-06 GGGGTTAGAGGTCA 14 FOXO6_forkhead_DBD_dimeric_14_1 SELEX - 36931687 36931700 8.0E-06 GTAAACTAGTTTTT 14 TBX1_TBX_DBD_dimeric_20_1 SELEX - 36929598 36929617 8.0E-06 AGAGGTGAAACAAGATGTGA 20 FOXO1_forkhead_DBD_dimeric_14_1 SELEX + 36931687 36931700 4.0E-06 AAAAACTAGTTTAC 14 V_TST1_02_M01316 TRANSFAC + 36930852 36930868 5.0E-06 TAATAATTAAGGAAGAT 17 V_FOXP3_Q4_M00992 TRANSFAC + 36931864 36931880 6.0E-06 GTAGTTTTTAGTCATGG 17 V_BTEB3_Q5_M01865 TRANSFAC - 36930291 36930303 9.0E-06 CTAAGGGAGGGGT 13 V_FOXA2_04_M02749 TRANSFAC + 36930772 36930788 0.0E+00 AAAAGGTAAATAAACCT 17 V_FOXD3_01_M00130 TRANSFAC + 36930810 36930821 9.0E-06 GAATGTTTTTCT 12 V_HOXA13_02_M01297 TRANSFAC + 36930779 36930787 3.0E-06 AAATAAACC 9 V_IK_Q5_M01169 TRANSFAC + 36930224 36930233 3.0E-06 TTTGGGAGGT 10 V_IRF3_05_M02767 TRANSFAC + 36929770 36929783 2.0E-06 TTGAAAGGAAACTT 14 V_HNF3_Q6_01_M01012 TRANSFAC - 36930771 36930788 6.0E-06 AGGTTTATTTACCTTTTA 18 V_HOXC6_01_M01406 TRANSFAC + 36930850 36930866 6.0E-06 TGTAATAATTAAGGAAG 17 V_PPAR_DR1_Q2_M00763 TRANSFAC + 36929879 36929891 5.0E-06 TGACCTCTAACCC 13 V_COUPTF_Q6_M01036 TRANSFAC + 36929874 36929896 6.0E-06 CATGGTGACCTCTAACCCCCGCG 23 V_ATF4_Q2_M00514 TRANSFAC + 36930042 36930053 6.0E-06 GATGACGCAACG 12 V_LYF1_01_M00141 TRANSFAC + 36930224 36930232 9.0E-06 TTTGGGAGG 9 V_PSX1_01_M01435 TRANSFAC - 36930849 36930865 4.0E-06 TTCCTTAATTATTACAT 17 V_NFY_Q6_01_M00775 TRANSFAC + 36929969 36929981 8.0E-06 GATCGACCAATCG 13 V_PAX6_02_M01391 TRANSFAC - 36930849 36930864 7.0E-06 TCCTTAATTATTACAT 16 V_CDX_Q5_M00991 TRANSFAC + 36930768 36930785 6.0E-06 TCTTAAAAGGTAAATAAA 18 V_REX1_01_M01695 TRANSFAC + 36930424 36930433 7.0E-06 TCAGCCATTT 10 V_LHX61_01_M01314 TRANSFAC - 36930850 36930866 7.0E-06 CTTCCTTAATTATTACA 17 V_HMBOX1_01_M01456 TRANSFAC + 36931687 36931703 2.0E-06 AAAAACTAGTTTACAAT 17 V_CRX_Q4_M00623 TRANSFAC + 36930187 36930199 1.0E-06 TCCTTAATCTCAT 13 V_FREAC3_01_M00291 TRANSFAC + 36930772 36930787 1.0E-06 AAAAGGTAAATAAACC 16 V_DBX2_01_M01360 TRANSFAC - 36930851 36930866 3.0E-06 CTTCCTTAATTATTAC 16 V_COUP_01_M00158 TRANSFAC + 36929879 36929892 7.0E-06 TGACCTCTAACCCC 14 V_POLY_C_M00212 TRANSFAC + 36930779 36930796 4.0E-06 AAATAAACCTCTTGCCAG 18 V_MRF2_01_M00454 TRANSFAC + 36931695 36931708 8.0E-06 GTTTACAATACTGA 14 Ddit3_Cebpa_MA0019.1 JASPAR + 36929986 36929997 6.0E-06 AGTTGCAATACC 12 Hand1_Tcfe2a_MA0092.1 JASPAR + 36930408 36930417 4.0E-06 GGTCTGGAAT 10 V_MAZ_Q6_01_M02023 TRANSFAC - 36930273 36930286 3.0E-06 TGGGGTGGAGAGGG 14 V_MAZ_Q6_01_M02023 TRANSFAC + 36931811 36931824 1.0E-06 TTGGGAGGAGAGGG 14 V_PMX2A_01_M01444 TRANSFAC - 36930851 36930866 7.0E-06 CTTCCTTAATTATTAC 16 V_SFPI1_04_M02896 TRANSFAC + 36930854 36930867 8.0E-06 ATAATTAAGGAAGA 14 V_ELF5_01_M01197 TRANSFAC - 36929676 36929686 8.0E-06 ATAAGGAAGCA 11 V_NFE4_Q5_M02105 TRANSFAC - 36931815 36931826 5.0E-06 CTCCCTCTCCTC 12 V_OCT1_08_M01354 TRANSFAC + 36930849 36930864 0.0E+00 ATGTAATAATTAAGGA 16 V_PIT1_01_M01465 TRANSFAC - 36930851 36930867 9.0E-06 TCTTCCTTAATTATTAC 17 V_PIT1_01_M01465 TRANSFAC + 36930852 36930868 6.0E-06 TAATAATTAAGGAAGAT 17 V_RREB1_01_M00257 TRANSFAC + 36930282 36930295 6.0E-06 CCCCACCTCACCCC 14 V_PNR_01_M01650 TRANSFAC - 36929879 36929892 4.0E-06 GGGGTTAGAGGTCA 14 V_STAT4_Q5_M02117 TRANSFAC + 36931711 36931720 1.0E-06 TTATAGGAAA 10 V_CREB_Q2_01_M00916 TRANSFAC - 36930040 36930053 7.0E-06 CGTTGCGTCATCAG 14 V_EN2_01_M01455 TRANSFAC - 36930849 36930865 7.0E-06 TTCCTTAATTATTACAT 17 V_FREAC2_01_M00290 TRANSFAC + 36930772 36930787 7.0E-06 AAAAGGTAAATAAACC 16 V_HOXB7_01_M01396 TRANSFAC + 36930851 36930866 1.0E-06 GTAATAATTAAGGAAG 16 V_TBP_01_M00471 TRANSFAC + 36930145 36930152 8.0E-06 TATAAATT 8 V_DR1_Q3_M00762 TRANSFAC - 36929879 36929891 8.0E-06 GGGTTAGAGGTCA 13 V_FOXL1_04_M02753 TRANSFAC + 36930772 36930788 0.0E+00 AAAAGGTAAATAAACCT 17 V_HNF1B_01_M01425 TRANSFAC - 36931688 36931704 7.0E-06 TATTGTAAACTAGTTTT 17 V_ESX1_01_M01474 TRANSFAC - 36930850 36930866 9.0E-06 CTTCCTTAATTATTACA 17 V_HB9_01_M01349 TRANSFAC + 36930851 36930866 6.0E-06 GTAATAATTAAGGAAG 16 V_FOXJ2_01_M00422 TRANSFAC + 36930771 36930788 3.0E-06 TAAAAGGTAAATAAACCT 18 V_FOXO1_04_M01969 TRANSFAC + 36929863 36929882 8.0E-06 GCGACCCTCAGCATGGTGAC 20 V_FOXO1_04_M01969 TRANSFAC + 36931681 36931700 2.0E-06 CAAACCAAAAACTAGTTTAC 20 V_NKX12_01_M01427 TRANSFAC - 36930850 36930866 3.0E-06 CTTCCTTAATTATTACA 17 V_HOXA7_03_M01394 TRANSFAC + 36930851 36930866 2.0E-06 GTAATAATTAAGGAAG 16 V_GLI_Q2_M01037 TRANSFAC + 36930224 36930235 4.0E-06 TTTGGGAGGTCC 12 V_MEF2_01_M00006 TRANSFAC - 36930216 36930231 1.0E-06 CTCCCAAAATAACCCT 16 V_HMEF2_Q6_M00406 TRANSFAC - 36930216 36930231 6.0E-06 CTCCCAAAATAACCCT 16 V_RXRLXRB_01_M01198 TRANSFAC - 36929879 36929891 4.0E-06 GGGTTAGAGGTCA 13 V_EHF_07_M02849 TRANSFAC - 36929390 36929405 3.0E-06 TAGGAGTTCCTAAGGT 16 V_STAT1_Q6_M01823 TRANSFAC + 36931711 36931720 4.0E-06 TTATAGGAAA 10 V_FOXK1_03_M02752 TRANSFAC + 36930772 36930788 0.0E+00 AAAAGGTAAATAAACCT 17 V_HOXB5_01_M01319 TRANSFAC - 36930849 36930864 9.0E-06 TCCTTAATTATTACAT 16 V_TR4_03_M01782 TRANSFAC - 36929879 36929891 0.0E+00 GGGTTAGAGGTCA 13

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.