Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

DEM1 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 64789 exonuclease 5 chr1 + 40969432 - 40974932 40974432 Transcription Factor Binding Sites   Download all TFBS in the DEM1 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints ZNF232_C2H2_full_monomeric_19_1 SELEX - 40974083 40974101 1.0E-05 TGGCCATCCGTGGATTCAG 19 znf143_MA0088.1 JASPAR - 40974366 40974385 8.0E-06 GCCTTCCCAGAGGCCCTCGC 20 znf143_MA0088.1 JASPAR - 40974401 40974420 4.0E-06 CCAGTCCCAGAGTGCCCCGC 20 V_ZBRK1_01_M01105 TRANSFAC + 40974865 40974879 2.0E-06 GGGAGACAGTGCTTT 15 V_PNR_01_M01650 TRANSFAC + 40974571 40974584 8.0E-06 AGTATCAGAGGTTA 14 V_STAF_02_M00264 TRANSFAC - 40974364 40974384 3.0E-06 CCTTCCCAGAGGCCCTCGCGG 21 V_STAF_02_M00264 TRANSFAC - 40974399 40974419 5.0E-06 CAGTCCCAGAGTGCCCCGCGG 21 V_TCFAP2B_03_M02820 TRANSFAC + 40974898 40974911 3.0E-06 TTCCCTGAAGGCAA 14 V_MECP2_02_M01299 TRANSFAC + 40974214 40974223 1.0E-06 CCGGAATTAA 10 V_TBX15_02_M01264 TRANSFAC + 40974064 40974081 5.0E-06 AGGTGCTAAGGTGGGGAT 18

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.