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ATPAF1 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 64756 ATP synthase mitochondrial F1 complex assembly factor 1 chr1 - 47131050 - 47139099 47131550 Transcription Factor Binding Sites   Download all TFBS in the ATPAF1 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints TBX21_TBX_full_dimeric_16_1 SELEX + 47131868 47131883 9.0E-06 GGTGACATAAAACACC 16 TBX21_TBX_full_dimeric_16_1 SELEX - 47131868 47131883 9.0E-06 GGTGTTTTATGTCACC 16 NHLH1_MA0048.1 JASPAR + 47133860 47133871 1.0E-06 GCGCAGCTGCGC 12 NHLH1_MA0048.1 JASPAR - 47133860 47133871 1.0E-06 GCGCAGCTGCGC 12 EWSR1-FLI1_MA0149.1 JASPAR - 47133267 47133284 8.0E-06 GGGAGGAGGGCATCAAAG 18 Ar_MA0007.1 JASPAR - 47138544 47138565 3.0E-06 CAAAGTACAATGAGACCCACAC 22 SP1_MA0079.2 JASPAR + 47133682 47133691 9.0E-06 CCCCTCCTCC 10 SP1_MA0079.2 JASPAR - 47134153 47134162 9.0E-06 CCCCTCCTCC 10 HNF4A_nuclearreceptor_full_dimeric_16_1 SELEX - 47138555 47138570 2.0E-06 GATTCCAAAGTACAAT 16 Pou5f1_MA0142.1 JASPAR + 47131892 47131906 5.0E-06 CACTGTCATGTAGAT 15 NHLH1_bHLH_full_dimeric_10_1 SELEX + 47133861 47133870 2.0E-06 CGCAGCTGCG 10 NHLH1_bHLH_full_dimeric_10_1 SELEX - 47133861 47133870 2.0E-06 CGCAGCTGCG 10 V_MEIS1BHOXA9_02_M00421 TRANSFAC + 47133254 47133267 1.0E-05 TGACACTATTAGTC 14 V_E2A_Q6_01_M02088 TRANSFAC + 47133935 47133947 2.0E-06 GGCCACCTGCAGG 13 V_ZFX_01_M01593 TRANSFAC - 47134037 47134052 1.0E-05 GCGCGGGCCGCGGGCC 16 V_POU5F1_02_M02245 TRANSFAC + 47131892 47131906 5.0E-06 CACTGTCATGTAGAT 15 V_HOXA13_02_M01297 TRANSFAC + 47131872 47131880 7.0E-06 ACATAAAAC 9 V_SP1_03_M02281 TRANSFAC + 47133682 47133691 9.0E-06 CCCCTCCTCC 10 V_SP1_03_M02281 TRANSFAC - 47134153 47134162 9.0E-06 CCCCTCCTCC 10 V_SP1_02_M01303 TRANSFAC + 47134146 47134156 3.0E-06 GGGGCGGGGAG 11 V_WT1_Q6_01_M02036 TRANSFAC + 47133998 47134007 4.0E-06 CGCCCCCGCC 10 V_TAL1_Q6_M00993 TRANSFAC - 47133735 47133744 3.0E-06 TCCAGCTGCT 10 V_ZFP410_03_M02832 TRANSFAC + 47131901 47131917 6.0E-06 GTAGATGGGATGTTTTT 17 V_E12_Q6_M00693 TRANSFAC - 47131987 47131997 6.0E-06 GGCAGGTGCCA 11 V_KROX_Q6_M00982 TRANSFAC + 47133996 47134009 2.0E-06 GCCGCCCCCGCCTC 14 V_MAZ_Q6_01_M02023 TRANSFAC + 47134150 47134163 4.0E-06 CGGGGAGGAGGGGG 14 V_EGR1_Q6_M01873 TRANSFAC - 47133997 47134006 4.0E-06 GCGGGGGCGG 10 V_SP1SP3_Q4_M01219 TRANSFAC + 47134003 47134013 5.0E-06 CCGCCTCCTCC 11 V_SP1SP3_Q4_M01219 TRANSFAC - 47134153 47134163 1.0E-05 CCCCCTCCTCC 11 V_SP1SP3_Q4_M01219 TRANSFAC + 47134219 47134229 5.0E-06 CCGCCTCCTCC 11 V_HNF4A_02_M02868 TRANSFAC - 47138553 47138568 4.0E-06 TTCCAAAGTACAATGA 16 V_TFIII_Q6_M00706 TRANSFAC - 47134258 47134266 6.0E-06 AGAGGGAGG 9 V_MTF1_06_M02882 TRANSFAC - 47131911 47131924 9.0E-06 AGAGAAGAAAAACA 14 V_TAL1_01_M01591 TRANSFAC + 47131914 47131926 1.0E-06 TTTTCTTCTCTCT 13 V_FPM315_01_M01587 TRANSFAC - 47134008 47134019 3.0E-06 GGAGGAGGAGGA 12 V_FPM315_01_M01587 TRANSFAC + 47134150 47134161 2.0E-06 CGGGGAGGAGGG 12 V_VDR_Q6_M00961 TRANSFAC - 47133231 47133242 9.0E-06 CCCATTGAACCC 12 V_E47_01_M00002 TRANSFAC - 47133933 47133947 9.0E-06 CCTGCAGGTGGCCGG 15 V_EWSR1FLI1_01_M02252 TRANSFAC - 47133267 47133284 8.0E-06 GGGAGGAGGGCATCAAAG 18 V_LPOLYA_B_M00318 TRANSFAC + 47131947 47131954 7.0E-06 CAATAAAG 8 V_LTF_Q6_M01692 TRANSFAC - 47133578 47133586 1.0E-05 GTCACTTGC 9 V_RNF96_01_M01199 TRANSFAC + 47134038 47134047 7.0E-06 GCCCGCGGCC 10 V_OCT4_01_M01125 TRANSFAC + 47131892 47131906 1.0E-05 CACTGTCATGTAGAT 15 V_TCF4_01_M01705 TRANSFAC + 47133266 47133274 5.0E-06 TCTTTGATG 9

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.