Search TFs
or Genes
Construction
and Validation
Optimal
Promoter Size
Download Citation and
Contact

SMYD3


EntrezDescriptionChrom.StrandPromoter
(Start - Stop)
TSS
64754 SET and MYND domain containing 3 chr1 -246670144 - 246675644 246670644

Transcription Factor Binding Sites

 
Download all TFBS in the SMYD3 promoter
 
MotifSourceStrandStartStop PValueMatch
Sequence
Overlap w/
Footprints
POU4F2_POU_full_monomeric_16_1 SELEX - 246666935 246666950 0.0E+00 ATGCATTTTTAATTTG 16
SOX21_HMG_DBD_dimeric_15_1 SELEX - 246666843 246666857 8.0E-06 TAAAATTCCATTGTT 15
SOX4_HMG_DBD_dimeric_16_1 SELEX - 246666843 246666858 5.0E-06 ATAAAATTCCATTGTT 16
HOXA10_homeodomain_DBD_monomeric_12_1 SELEX + 246670937 246670948 9.0E-06 TGTCGTTAAACT 12
IRF7_IRF_DBD_dimeric_14_1 SELEX - 246671003 246671016 1.0E-05 CCTAAAACAAAAAA 14
SRY_HMG_DBD_dimeric_15_1 SELEX - 246666843 246666857 1.0E-06 TAAAATTCCATTGTT 15
POU3F3_POU_DBD_monomeric_12_1 SELEX - 246666939 246666950 6.0E-06 ATGCATTTTTAA 12
SOX2_HMG_full_dimeric_17_1 SELEX - 246666842 246666858 2.0E-06 ATAAAATTCCATTGTTA 17
FOXG1_forkhead_DBD_dimeric_17_1 SELEX + 246666690 246666706 1.0E-05 AAAACCAAAGACAAACA 17
POU3F2_POU_DBD_monomeric_13_1 SELEX - 246666939 246666951 7.0E-06 CATGCATTTTTAA 13
Zfp423_MA0116.1 JASPAR - 246670156 246670170 5.0E-06 ACCCCCCTAGGTTGC 15
HOXC11_homeodomain_full_monomeric_11_1 SELEX + 246670937 246670947 8.0E-06 TGTCGTTAAAC 11
Sox17_HMG_DBD_dimeric_15_1 SELEX - 246666843 246666857 2.0E-06 TAAAATTCCATTGTT 15
Sox17_HMG_DBD_dimeric_15_1 SELEX + 246666964 246666978 7.0E-06 GACAATATAAGTGAT 15
Sox1_HMG_DBD_dimeric_13_1 SELEX - 246666965 246666977 5.0E-06 TCACTTATATTGT 13
Pax4_MA0068.1 JASPAR + 246666729 246666758 4.0E-06 AAATATTAATCCTTGAATGATTAACATCTC 30
Pax4_MA0068.1 JASPAR + 246669211 246669240 7.0E-06 AAAAACTTCAAGATGCTGCTCTCTCCCGAA 30
POU4F3_POU_DBD_monomeric_16_1 SELEX - 246666935 246666950 0.0E+00 ATGCATTTTTAATTTG 16
HNF1A_homeodomain_full_dimeric_15_1 SELEX + 246666740 246666754 4.0E-06 CTTGAATGATTAACA 15
OTX2_homeodomain_DBD_monomeric_8_1 SELEX + 246666734 246666741 7.0E-06 TTAATCCT 8
POU2F3_POU_DBD_dimeric_12_1 SELEX + 246666939 246666950 9.0E-06 TTAAAAATGCAT 12
SOX14_HMG_DBD_dimeric_13_1 SELEX - 246666844 246666856 5.0E-06 AAAATTCCATTGT 13
SRY_MA0084.1 JASPAR - 246669187 246669195 9.0E-06 GAAAACAAT 9
HOXC11_homeodomain_DBD_monomeric_11_1 SELEX + 246670937 246670947 1.0E-05 TGTCGTTAAAC 11
SOX18_HMG_full_dimeric_15_1 SELEX + 246666843 246666857 9.0E-06 AACAATGGAATTTTA 15
SOX18_HMG_full_dimeric_15_1 SELEX - 246666843 246666857 1.0E-05 TAAAATTCCATTGTT 15
SOX18_HMG_full_dimeric_15_1 SELEX + 246666964 246666978 5.0E-06 GACAATATAAGTGAT 15
SOX15_HMG_full_dimeric_15_1 SELEX - 246666843 246666857 6.0E-06 TAAAATTCCATTGTT 15
SOX7_HMG_full_dimeric_17_1 SELEX - 246666842 246666858 3.0E-06 ATAAAATTCCATTGTTA 17
VENTX_homeodomain_DBD_dimeric_21_1 SELEX + 246666732 246666752 7.0E-06 TATTAATCCTTGAATGATTAA 21
VENTX_homeodomain_DBD_dimeric_21_1 SELEX - 246666734 246666754 5.0E-06 TGTTAATCATTCAAGGATTAA 21
POU1F1_POU_DBD_monomeric_17_1 SELEX - 246666937 246666953 0.0E+00 TGCATGCATTTTTAATT 17
HNF1B_homeodomain_full_dimeric_13_1 SELEX + 246666741 246666753 6.0E-06 TTGAATGATTAAC 13
HNF1B_homeodomain_full_dimeric_13_1 SELEX - 246666741 246666753 3.0E-06 GTTAATCATTCAA 13
Hoxa11_homeodomain_DBD_monomeric_12_1 SELEX + 246670937 246670948 4.0E-06 TGTCGTTAAACT 12
Hoxd9_homeodomain_DBD_monomeric_9_1 SELEX - 246666853 246666861 9.0E-06 CACATAAAA 9
POU3F1_POU_DBD_monomeric_12_2 SELEX - 246666939 246666950 4.0E-06 ATGCATTTTTAA 12
POU5F1P1_POU_DBD_monomeric_12_1 SELEX + 246666939 246666950 1.0E-05 TTAAAAATGCAT 12
SPDEF_ETS_full_putative-multimer_16_1 SELEX - 246670995 246671010 2.0E-06 ACAAAAAAAAGTTACA 16
FOXI1_forkhead_full_dimeric_17_1 SELEX + 246670933 246670949 6.0E-06 GTATTGTCGTTAAACTA 17
NR3C1_MA0113.1 JASPAR - 246669178 246669195 5.0E-06 GAAAACAATTCGTTCCTT 18
Sox11_HMG_DBD_dimeric_15_1 SELEX - 246666843 246666857 3.0E-06 TAAAATTCCATTGTT 15
ZNF410_C2H2_DBD_monomeric_17_1 SELEX - 246666850 246666866 1.0E-05 TGCAGCACATAAAATTC 17
DMBX1_homeodomain_DBD_monomeric_10_1 SELEX - 246666733 246666742 4.0E-06 AAGGATTAAT 10
HNF1B_homeodomain_full_dimeric_15_1 SELEX + 246666740 246666754 5.0E-06 CTTGAATGATTAACA 15
HNF1B_homeodomain_full_dimeric_15_1 SELEX - 246666740 246666754 9.0E-06 TGTTAATCATTCAAG 15
Sox3_HMG_DBD_dimeric_17_1 SELEX + 246666842 246666858 1.0E-06 TAACAATGGAATTTTAT 17
Sox3_HMG_DBD_dimeric_17_1 SELEX - 246666842 246666858 2.0E-06 ATAAAATTCCATTGTTA 17
Sox3_HMG_DBD_dimeric_17_1 SELEX + 246666963 246666979 2.0E-06 GGACAATATAAGTGATT 17
NRF1_NRF_full_dimeric_12_1 SELEX - 246670652 246670663 4.0E-06 TGCGCATGCTCT 12
Sox1_HMG_DBD_dimeric_15_1 SELEX - 246666843 246666857 5.0E-06 TAAAATTCCATTGTT 15
Sox1_HMG_DBD_dimeric_15_1 SELEX - 246666964 246666978 7.0E-06 ATCACTTATATTGTC 15
Foxj3_forkhead_DBD_dimeric_13_1 SELEX - 246671002 246671014 5.0E-06 TAAAACAAAAAAA 13
POU4F1_POU_DBD_monomeric_14_1 SELEX - 246666937 246666950 0.0E+00 ATGCATTTTTAATT 14
HNF1A_MA0046.1 JASPAR - 246666741 246666754 8.0E-06 TGTTAATCATTCAA 14
SOX9_HMG_full_dimeric_17_1 SELEX - 246666842 246666858 5.0E-06 ATAAAATTCCATTGTTA 17
Zfx_MA0146.1 JASPAR + 246670173 246670186 8.0E-06 CCGGGCGGGGCCTG 14
V_FOXP1_01_M00987 TRANSFAC - 246666688 246666707 2.0E-06 ATGTTTGTCTTTGGTTTTCT 20
V_FOXP3_Q4_M00992 TRANSFAC + 246670802 246670818 5.0E-06 ATCATTTTAACGCATAC 17
V_OBOX5_05_M03066 TRANSFAC - 246666729 246666745 3.0E-06 TTCAAGGATTAATATTT 17
V_SOX30_03_M02804 TRANSFAC + 246666839 246666854 0.0E+00 TCATAACAATGGAATT 16
V_HMGIY_Q3_M01010 TRANSFAC + 246666846 246666860 0.0E+00 AATGGAATTTTATGT 15
V_SP1_Q6_01_M00931 TRANSFAC + 246670627 246670636 4.0E-06 GGGGCGGGGC 10
V_SRY_02_M00160 TRANSFAC - 246671003 246671014 1.0E-06 TAAAACAAAAAA 12
V_SOX11_04_M02899 TRANSFAC + 246669184 246669197 1.0E-05 CGAATTGTTTTCAA 14
V_PRX2_Q2_M02115 TRANSFAC + 246666934 246666942 2.0E-06 TCAAATTAA 9
V_NR3C1_01_M02219 TRANSFAC - 246669178 246669195 5.0E-06 GAAAACAATTCGTTCCTT 18
V_TCFAP2E_04_M02926 TRANSFAC - 246671000 246671013 4.0E-06 AAAACAAAAAAAAG 14
V_TCFAP2E_04_M02926 TRANSFAC - 246671001 246671014 2.0E-06 TAAAACAAAAAAAA 14
V_HES1_Q6_M02011 TRANSFAC - 246670733 246670742 2.0E-06 GGCACGAGCC 10
V_ELF4_04_M02850 TRANSFAC + 246666932 246666948 5.0E-06 CATCAAATTAAAAATGC 17
V_SOX13_03_M02797 TRANSFAC - 246669182 246669197 4.0E-06 TTGAAAACAATTCGTT 16
V_GC_01_M00255 TRANSFAC + 246670625 246670638 9.0E-06 GAGGGGCGGGGCGG 14
V_SOX7_03_M02807 TRANSFAC + 246666836 246666857 0.0E+00 CAATCATAACAATGGAATTTTA 22
V_OBOX5_02_M01480 TRANSFAC - 246666729 246666745 3.0E-06 TTCAAGGATTAATATTT 17
V_LMX1_01_M01409 TRANSFAC + 246666931 246666947 7.0E-06 CCATCAAATTAAAAATG 17
V_ZFP105_03_M02827 TRANSFAC + 246666780 246666794 8.0E-06 TATAAAAAAGATTAG 15
V_ZFP105_03_M02827 TRANSFAC - 246671000 246671014 4.0E-06 TAAAACAAAAAAAAG 15
V_ZFP105_03_M02827 TRANSFAC - 246671001 246671015 2.0E-06 CTAAAACAAAAAAAA 15
V_HNF1_Q6_M00790 TRANSFAC - 246666738 246666755 4.0E-06 ATGTTAATCATTCAAGGA 18
V_ZBTB7B_04_M02930 TRANSFAC - 246670705 246670721 2.0E-06 CTTACGACCACCTTCAG 17
V_NKX61_01_M00424 TRANSFAC - 246666933 246666945 0.0E+00 TTTTTAATTTGAT 13
V_HOXD12_01_M01380 TRANSFAC + 246670934 246670950 4.0E-06 TATTGTCGTTAAACTAT 17
V_SP1_Q6_M00196 TRANSFAC + 246670625 246670637 2.0E-06 GAGGGGCGGGGCG 13
V_FOXK1_04_M02856 TRANSFAC + 246666835 246666849 6.0E-06 ACAATCATAACAATG 15
V_MAZ_Q6_01_M02023 TRANSFAC - 246670292 246670305 1.0E-06 TGGGGAGGGGGGGG 14
V_AP2BETA_Q3_M01858 TRANSFAC - 246670200 246670215 8.0E-06 GCGTGTGCCCGGGGGC 16
V_HNF3_Q6_M00791 TRANSFAC + 246666696 246666708 3.0E-06 AAAGACAAACATA 13
V_STAT5A_02_M00460 TRANSFAC + 246666722 246666745 1.0E-05 TTCCCCAAAATATTAATCCTTGAA 24
V_STAT5A_02_M00460 TRANSFAC + 246669160 246669183 4.0E-06 TTCCAAGAACTATCTTGAAAGGAA 24
V_HOXC11_01_M01329 TRANSFAC + 246670934 246670949 2.0E-06 TATTGTCGTTAAACTA 16
V_SOX18_03_M02801 TRANSFAC - 246666837 246666852 1.0E-06 TTCCATTGTTATGATT 16
V_SOX18_03_M02801 TRANSFAC + 246669183 246669198 6.0E-06 ACGAATTGTTTTCAAC 16
V_HOXD11_01_M01434 TRANSFAC + 246670934 246670950 1.0E-06 TATTGTCGTTAAACTAT 17
V_NFE4_Q5_M02105 TRANSFAC + 246670295 246670306 7.0E-06 CCCCCTCCCCAG 12
V_SP1SP3_Q4_M01219 TRANSFAC + 246670292 246670302 2.0E-06 CCCCCCCCTCC 11
V_HOXA11_01_M01378 TRANSFAC + 246670934 246670949 2.0E-06 TATTGTCGTTAAACTA 16
V_HIC1_02_M01072 TRANSFAC - 246670202 246670216 6.0E-06 CGCGTGTGCCCGGGG 15
V_SOX11_03_M02795 TRANSFAC + 246666838 246666854 1.0E-06 ATCATAACAATGGAATT 17
V_SOX11_03_M02795 TRANSFAC - 246671000 246671016 6.0E-06 CCTAAAACAAAAAAAAG 17
V_SOX9_B1_M00410 TRANSFAC + 246666839 246666852 0.0E+00 TCATAACAATGGAA 14
V_SP4_Q5_M01273 TRANSFAC - 246670626 246670636 8.0E-06 GCCCCGCCCCT 11
V_SOX15_03_M02799 TRANSFAC + 246666838 246666854 4.0E-06 ATCATAACAATGGAATT 17
V_SOX15_03_M02799 TRANSFAC - 246669181 246669197 4.0E-06 TTGAAAACAATTCGTTC 17
V_CEBPA_01_M00116 TRANSFAC + 246669204 246669217 9.0E-06 AGTTTACAAAAACT 14
V_ZBTB3_03_M02825 TRANSFAC - 246670831 246670847 4.0E-06 GTGTTCACTGCACTGTT 17
V_FOXL1_02_M02857 TRANSFAC - 246671003 246671018 8.0E-06 GTCCTAAAACAAAAAA 16
V_FOXJ3_06_M02855 TRANSFAC + 246666835 246666851 2.0E-06 ACAATCATAACAATGGA 17
V_ZSCAN4_04_M02942 TRANSFAC - 246666851 246666866 1.0E-06 TGCAGCACATAAAATT 16
V_GATA6_01_M00462 TRANSFAC + 246666786 246666795 9.0E-06 AAAGATTAGA 10
V_ZFP206_01_M01742 TRANSFAC - 246670653 246670663 3.0E-06 TGCGCATGCTC 11
V_DOBOX5_01_M01463 TRANSFAC - 246666729 246666745 0.0E+00 TTCAAGGATTAATATTT 17
V_OTX2_01_M01387 TRANSFAC - 246666729 246666745 0.0E+00 TTCAAGGATTAATATTT 17
V_FOX_Q2_M00809 TRANSFAC - 246666697 246666709 8.0E-06 GTATGTTTGTCTT 13
V_PBX1_02_M00124 TRANSFAC + 246666926 246666940 9.0E-06 TACCTCCATCAAATT 15
V_IRC900814_03_M02766 TRANSFAC - 246670931 246670946 7.0E-06 TTTAACGACAATACGT 16
V_SOX8_03_M02808 TRANSFAC - 246666838 246666854 3.0E-06 AATTCCATTGTTATGAT 17
V_SOX8_03_M02808 TRANSFAC + 246669181 246669197 1.0E-05 GAACGAATTGTTTTCAA 17
V_DMRT2_01_M01147 TRANSFAC - 246666844 246666859 5.0E-06 CATAAAATTCCATTGT 16
V_SRF_06_M02916 TRANSFAC - 246670768 246670784 8.0E-06 GGGAGAAAAAAAACCCC 17
V_SRF_06_M02916 TRANSFAC - 246670997 246671013 4.0E-06 AAAACAAAAAAAAGTTA 17
V_SRF_06_M02916 TRANSFAC - 246670998 246671014 9.0E-06 TAAAACAAAAAAAAGTT 17
V_SRF_06_M02916 TRANSFAC - 246670999 246671015 1.0E-06 CTAAAACAAAAAAAAGT 17
V_SRF_06_M02916 TRANSFAC - 246671000 246671016 4.0E-06 CCTAAAACAAAAAAAAG 17
V_FOXJ2_01_M00422 TRANSFAC + 246666694 246666711 5.0E-06 CCAAAGACAAACATACAG 18
V_HNF1A_Q5_M02013 TRANSFAC - 246666744 246666754 1.0E-06 TGTTAATCATT 11
V_IPF1_Q4_01_M01013 TRANSFAC + 246666625 246666639 1.0E-05 ACTATCATTAGAGTT 15
V_GSC_01_M01428 TRANSFAC + 246666729 246666745 0.0E+00 AAATATTAATCCTTGAA 17
V_SOX2_Q6_M01272 TRANSFAC - 246666839 246666854 0.0E+00 AATTCCATTGTTATGA 16
V_HOXC10_01_M01361 TRANSFAC + 246670934 246670949 2.0E-06 TATTGTCGTTAAACTA 16
V_PITX2_01_M01447 TRANSFAC - 246666729 246666745 0.0E+00 TTCAAGGATTAATATTT 17
V_SOX12_03_M02796 TRANSFAC - 246666837 246666850 3.0E-06 CCATTGTTATGATT 14
V_SOX12_03_M02796 TRANSFAC + 246669185 246669198 3.0E-06 GAATTGTTTTCAAC 14
V_PIT1_Q6_M00802 TRANSFAC - 246666776 246666793 7.0E-06 TAATCTTTTTTATATCCC 18
V_SP1_Q2_01_M00933 TRANSFAC - 246670626 246670635 7.0E-06 CCCCGCCCCT 10
V_MAFK_04_M02880 TRANSFAC + 246666938 246666952 9.0E-06 ATTAAAAATGCATGC 15
V_MAFK_04_M02880 TRANSFAC + 246669209 246669223 7.0E-06 ACAAAAACTTCAAGA 15
V_SOX5_07_M02909 TRANSFAC + 246669181 246669197 7.0E-06 GAACGAATTGTTTTCAA 17
V_GATA6_04_M02757 TRANSFAC + 246666783 246666799 2.0E-06 AAAAAAGATTAGACTTA 17
V_SP1_Q4_01_M00932 TRANSFAC + 246670625 246670637 4.0E-06 GAGGGGCGGGGCG 13
V_HNF1A_01_M02162 TRANSFAC - 246666741 246666754 8.0E-06 TGTTAATCATTCAA 14
V_OBOX5_01_M01381 TRANSFAC - 246666729 246666745 4.0E-06 TTCAAGGATTAATATTT 17
V_TCF3_05_M02920 TRANSFAC - 246671004 246671018 8.0E-06 GTCCTAAAACAAAAA 15
V_DMRT1_01_M01146 TRANSFAC + 246670994 246671008 5.0E-06 CTGTAACTTTTTTTT 15
V_OTX1_01_M01366 TRANSFAC - 246666729 246666745 1.0E-06 TTCAAGGATTAATATTT 17
V_OBOX6_06_M03067 TRANSFAC + 246666729 246666745 4.0E-06 AAATATTAATCCTTGAA 17
V_SMAD1_01_M01590 TRANSFAC + 246666840 246666851 3.0E-06 CATAACAATGGA 12
V_SMAD1_01_M01590 TRANSFAC - 246671003 246671014 7.0E-06 TAAAACAAAAAA 12
V_NANOG_02_M01247 TRANSFAC + 246666836 246666855 3.0E-06 CAATCATAACAATGGAATTT 20
V_NANOG_02_M01247 TRANSFAC - 246670770 246670789 6.0E-06 TTAGAGGGAGAAAAAAAACC 20
Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns.
Developed at the Institute for Systems Biology in the Baliga Lab.
A Django site.   Powered by PostgreSQL