Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 646960 protease, serine, 56 chr2 + 233380172 - 233385672 233385172 Transcription Factor Binding Sites   Download all TFBS in the promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints CTCF_MA0139.1 JASPAR - 233386970 233386988 2.0E-06 CCGCCGCCAGGGGGCAGCA 19 EN2_homeodomain_full_monomeric_10_1 SELEX - 233384602 233384611 2.0E-06 CCTAATTAGC 10 TFAP2B_TFAP_DBD_dimeric_12_1 SELEX - 233383713 233383724 3.0E-06 TCCCCTAGGGCA 12 RUNX2_RUNX_DBD_monomeric_9_1 SELEX - 233389242 233389250 8.0E-06 AAACCACAA 9 EMX1_homeodomain_DBD_monomeric_10_1 SELEX - 233384602 233384611 5.0E-06 CCTAATTAGC 10 NOTO_homeodomain_DBD_monomeric_10_1 SELEX - 233384602 233384611 7.0E-06 CCTAATTAGC 10 Tcf7_HMG_DBD_monomeric_12_1 SELEX - 233384614 233384625 1.0E-05 GATGATCAAAGC 12 MYBL1_MYB_DBD_dimeric_17_1 SELEX - 233389075 233389091 1.0E-05 GGGCGTCATTACCGTTG 17 EN1_homeodomain_DBD_monomeric_10_1 SELEX - 233384602 233384611 5.0E-06 CCTAATTAGC 10 PAX4_PAX_full_monomeric_8_1 SELEX + 233384603 233384610 7.0E-06 CTAATTAG 8 PAX4_PAX_full_monomeric_8_1 SELEX - 233384603 233384610 7.0E-06 CTAATTAG 8 GBX1_homeodomain_DBD_monomeric_10_1 SELEX - 233384602 233384611 4.0E-06 CCTAATTAGC 10 LHX2_homeodomain_DBD_monomeric_10_1 SELEX + 233384602 233384611 8.0E-06 GCTAATTAGG 10 LHX2_homeodomain_DBD_monomeric_10_1 SELEX - 233384602 233384611 9.0E-06 CCTAATTAGC 10 POU6F2_POU_full_monomeric_10_1 SELEX + 233384602 233384611 7.0E-06 GCTAATTAGG 10 TFAP2C_TFAP_full_dimeric_12_1 SELEX - 233383713 233383724 2.0E-06 TCCCCTAGGGCA 12 TFAP2A_MA0003.1 JASPAR + 233383714 233383722 8.0E-06 GCCCTAGGG 9 Lhx8_homeodomain_DBD_monomeric_8_1 SELEX + 233384603 233384610 7.0E-06 CTAATTAG 8 Lhx8_homeodomain_DBD_monomeric_8_1 SELEX - 233384603 233384610 7.0E-06 CTAATTAG 8 RUNX1_MA0002.2 JASPAR + 233389240 233389250 8.0E-06 ACTTGTGGTTT 11 TFAP2A_TFAP_DBD_dimeric_12_1 SELEX - 233383713 233383724 3.0E-06 TCCCCTAGGGCA 12 EMX2_homeodomain_DBD_monomeric_10_1 SELEX + 233384602 233384611 5.0E-06 GCTAATTAGG 10 EMX2_homeodomain_DBD_monomeric_10_1 SELEX - 233384602 233384611 9.0E-06 CCTAATTAGC 10 EN1_homeodomain_full_monomeric_8_1 SELEX + 233384603 233384610 7.0E-06 CTAATTAG 8 EN1_homeodomain_full_monomeric_8_1 SELEX - 233384603 233384610 7.0E-06 CTAATTAG 8 Tcfap2a_TFAP_DBD_dimeric_12_1 SELEX - 233383713 233383724 9.0E-06 TCCCCTAGGGCA 12 RREB1_MA0073.1 JASPAR + 233384570 233384589 2.0E-06 CACCCCACCACCCCCAGTGC 20 LHX6_homeodomain_full_monomeric_10_1 SELEX - 233384602 233384611 8.0E-06 CCTAATTAGC 10 V_AP2ALPHA_01_M00469 TRANSFAC + 233383714 233383722 8.0E-06 GCCCTAGGG 9 V_MINI20_B_M00324 TRANSFAC + 233388898 233388918 5.0E-06 CTGCGGCTTCACTCAGGTACC 21 V_ZFP410_04_M02936 TRANSFAC - 233384664 233384680 2.0E-06 CCCCTCTGCCCCTAATT 17 V_MTF1_Q4_M00650 TRANSFAC + 233388879 233388892 2.0E-06 TCTGCACCCCGCCC 14 V_NKX29_01_M01352 TRANSFAC + 233389232 233389248 5.0E-06 TTTGGAGTACTTGTGGT 17 V_AML3_Q6_M01856 TRANSFAC - 233389242 233389249 1.0E-05 AACCACAA 8 V_SP1_02_M01303 TRANSFAC + 233384677 233384687 5.0E-06 GGGGTGGGGAG 11 V_LHX8_01_M01440 TRANSFAC - 233384598 233384614 2.0E-06 CAGCCTAATTAGCGCCG 17 V_EVX2_01_M01386 TRANSFAC + 233384598 233384614 9.0E-06 CGGCGCTAATTAGGCTG 17 V_TRF1_01_M01237 TRANSFAC - 233388992 233389006 1.0E-05 ACAGGGTTAGGGTAC 15 V_GC_01_M00255 TRANSFAC + 233384703 233384716 1.0E-06 AGGGGGTGGGGCTG 14 V_RUNX1_01_M02257 TRANSFAC + 233389240 233389250 8.0E-06 ACTTGTGGTTT 11 V_AML2_01_M01759 TRANSFAC - 233389242 233389249 1.0E-05 AACCACAA 8 V_SP1_01_M00008 TRANSFAC + 233387151 233387160 7.0E-06 GGGGCAGGGT 10 V_CTCF_01_M01200 TRANSFAC - 233386970 233386989 0.0E+00 GCCGCCGCCAGGGGGCAGCA 20 V_MINI19_B_M00323 TRANSFAC + 233388898 233388918 8.0E-06 CTGCGGCTTCACTCAGGTACC 21 V_MSX2_01_M01393 TRANSFAC - 233384599 233384615 3.0E-06 GCAGCCTAATTAGCGCC 17 V_PLAG1_01_M01778 TRANSFAC + 233388685 233388700 4.0E-06 GGGGCAGAGGGGAGGG 16 V_IPF1_01_M01233 TRANSFAC + 233384601 233384610 7.0E-06 CGCTAATTAG 10 V_TCFAP2B_03_M02820 TRANSFAC + 233383712 233383725 1.0E-06 ATGCCCTAGGGGAA 14 V_TCFAP2B_03_M02820 TRANSFAC - 233383712 233383725 0.0E+00 TTCCCCTAGGGCAT 14 V_MSX1_01_M00394 TRANSFAC - 233384592 233384600 7.0E-06 CCGTAATTG 9 V_ZFP281_01_M01597 TRANSFAC + 233384703 233384713 5.0E-06 AGGGGGTGGGG 11 V_CHX10_01_M00437 TRANSFAC - 233384599 233384612 6.0E-06 GCCTAATTAGCGCC 14 V_HB9_01_M01349 TRANSFAC - 233384598 233384613 8.0E-06 AGCCTAATTAGCGCCG 16 V_COREBINDINGFACTOR_Q6_M00722 TRANSFAC + 233389243 233389250 1.0E-05 TGTGGTTT 8 V_OG2_02_M01441 TRANSFAC + 233384599 233384615 6.0E-06 GGCGCTAATTAGGCTGC 17 V_SP1_Q4_01_M00932 TRANSFAC + 233384703 233384715 5.0E-06 AGGGGGTGGGGCT 13 V_IPF1_03_M01235 TRANSFAC + 233384601 233384610 8.0E-06 CGCTAATTAG 10

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.