Search TFs
or Genes
Construction
and Validation
Optimal
Promoter Size
Download Citation and
Contact

SEBOX


EntrezDescriptionChrom.StrandPromoter
(Start - Stop)
TSS
645832 SEBOX homeobox chr17 -26691765 - 26697265 26692265

Transcription Factor Binding Sites

 
Download all TFBS in the SEBOX promoter
 
MotifSourceStrandStartStop PValueMatch
Sequence
Overlap w/
Footprints
CTCF_MA0139.1 JASPAR - 26695310 26695328 5.0E-06 CAGCCAGCAGAGGGAGGGG 19
NR4A2_nuclearreceptor_full_monomeric_11_1 SELEX + 26695389 26695399 9.0E-06 CCAAAAGGTCA 11
NR2F1_nuclearreceptor_DBD_monomeric_13_1 SELEX + 26695391 26695403 0.0E+00 AAAAGGTCAACAG 13
Zfp423_MA0116.1 JASPAR - 26693816 26693830 1.0E-05 CCACCCCTAGGGTGA 15
SP1_C2H2_DBD_monomeric_11_1 SELEX + 26695271 26695281 7.0E-06 ACCCCACCCCC 11
PLAG1_MA0163.1 JASPAR - 26695278 26695291 2.0E-06 GGGGGCCTGGGGGG 14
V_HP1SITEFACTOR_Q6_M00725 TRANSFAC + 26695392 26695403 8.0E-06 AAAGGTCAACAG 12
V_NR2F2_03_M02783 TRANSFAC + 26695388 26695403 2.0E-06 CCCAAAAGGTCAACAG 16
V_CACCCBINDINGFACTOR_Q6_M00721 TRANSFAC - 26693814 26693829 2.0E-06 CACCCCTAGGGTGAGC 16
V_GC_01_M00255 TRANSFAC - 26695307 26695320 5.0E-06 AGAGGGAGGGGCTG 14
V_ZBTB7B_03_M02826 TRANSFAC + 26695283 26695297 3.0E-06 CAGGCCCCCTAAACT 15
V_CTCF_02_M01259 TRANSFAC - 26695312 26695331 2.0E-06 GCACAGCCAGCAGAGGGAGG 20
V_NR1B1_Q6_M02110 TRANSFAC + 26695392 26695401 4.0E-06 AAAGGTCAAC 10
V_CTCF_01_M01200 TRANSFAC - 26695310 26695329 1.0E-06 ACAGCCAGCAGAGGGAGGGG 20
V_TFIII_Q6_M00706 TRANSFAC - 26695312 26695320 6.0E-06 AGAGGGAGG 9
V_PTF1BETA_Q6_M00657 TRANSFAC - 26695377 26695390 1.0E-06 GGGGAAAGCTCAGC 14
V_ZFP281_01_M01597 TRANSFAC - 26695272 26695282 4.0E-06 GGGGGGTGGGG 11
V_SREBP_Q3_M00776 TRANSFAC + 26693812 26693823 7.0E-06 AGGCTCACCCTA 12
V_RARA_03_M02787 TRANSFAC + 26695388 26695403 3.0E-06 CCCAAAAGGTCAACAG 16
V_NUR77_Q5_M01217 TRANSFAC - 26695391 26695400 2.0E-06 TTGACCTTTT 10
V_SP1_Q4_01_M00932 TRANSFAC - 26695308 26695320 9.0E-06 AGAGGGAGGGGCT 13
V_BRCA_01_M01082 TRANSFAC - 26695398 26695405 1.0E-05 TTCTGTTG 8
Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns.
Developed at the Institute for Systems Biology in the Baliga Lab.
A Django site.   Powered by PostgreSQL