Search TFs
or Genes
Construction
and Validation
Optimal
Promoter Size
Download Citation and
Contact

TMEM200C


EntrezDescriptionChrom.StrandPromoter
(Start - Stop)
TSS
645369 transmembrane protein 200C chr18 -5891603 - 5897103 5892103

Transcription Factor Binding Sites

 
Download all TFBS in the TMEM200C promoter
 
MotifSourceStrandStartStop PValueMatch
Sequence
Overlap w/
Footprints
MEF2D_MADS_DBD_dimeric_12_1 SELEX + 5894562 5894573 3.0E-06 TCTAAAAATACA 12
STAT1_MA0137.2 JASPAR - 5895242 5895256 4.0E-06 CACTTCTTGGAAACT 15
MEF2A_MADS_DBD_dimeric_12_1 SELEX + 5894562 5894573 3.0E-06 TCTAAAAATACA 12
MEF2B_MADS_full_dimeric_12_1 SELEX + 5894562 5894573 5.0E-06 TCTAAAAATACA 12
FOXB1_forkhead_DBD_putative-multimer_14_1 SELEX + 5895494 5895507 6.0E-06 CCATGACACAGGGA 14
RFX3_RFX_DBD_dimeric_15_1 SELEX + 5895475 5895489 1.0E-06 TGTTGCTAAGAGACC 15
SOX7_HMG_full_dimeric_17_1 SELEX - 5894564 5894580 7.0E-06 AAGCAGTTGTATTTTTA 17
MZF1_5-13_MA0057.1 JASPAR - 5896038 5896047 4.0E-06 GGAGGGGGAA 10
RFX4_RFX_DBD_dimeric_15_1 SELEX + 5895475 5895489 2.0E-06 TGTTGCTAAGAGACC 15
TBX21_TBX_full_dimeric_19_1 SELEX - 5895385 5895403 2.0E-06 CCACACAAAAGAGGCGCGA 19
Tcfap2a_TFAP_DBD_dimeric_11_1 SELEX + 5895191 5895201 1.0E-05 CGCCCCAGGCT 11
V_STAT5A_Q6_M01890 TRANSFAC - 5895245 5895257 3.0E-06 ACACTTCTTGGAA 13
V_SIX6_02_M01398 TRANSFAC + 5893025 5893041 2.0E-06 TTAAAGGTATCATGTGT 17
V_MMEF2_Q6_M00405 TRANSFAC + 5894559 5894574 2.0E-06 ATGTCTAAAAATACAA 16
V_STAT_Q6_M00777 TRANSFAC - 5895246 5895258 1.0E-06 GACACTTCTTGGA 13
V_AP2_Q6_01_M00915 TRANSFAC + 5895189 5895201 6.0E-06 CCCGCCCCAGGCT 13
V_GABPA_04_M02858 TRANSFAC + 5896033 5896048 4.0E-06 CTCTCTTCCCCCTCCC 16
V_STAT5B_01_M00459 TRANSFAC - 5895242 5895256 9.0E-06 CACTTCTTGGAAACT 15
V_SP1_02_M01303 TRANSFAC - 5890884 5890894 8.0E-06 GGGGCGGGGAC 11
V_MEF2A_Q6_M02024 TRANSFAC - 5894562 5894571 0.0E+00 TATTTTTAGA 10
V_WT1_Q6_01_M02036 TRANSFAC + 5896129 5896138 4.0E-06 CGCCCCCGCC 10
V_SIX1_01_M01313 TRANSFAC + 5893025 5893041 1.0E-06 TTAAAGGTATCATGTGT 17
V_GATA3_05_M02859 TRANSFAC + 5893037 5893058 3.0E-06 TGTGTCAGATTTCATCAGGGAA 22
V_RSRFC4_Q2_M00407 TRANSFAC + 5894560 5894576 5.0E-06 TGTCTAAAAATACAACT 17
V_SIX3_01_M01358 TRANSFAC + 5893025 5893041 7.0E-06 TTAAAGGTATCATGTGT 17
V_AMEF2_Q6_M00403 TRANSFAC + 5894559 5894576 8.0E-06 ATGTCTAAAAATACAACT 18
V_EGR1_Q6_M01873 TRANSFAC - 5896128 5896137 4.0E-06 GCGGGGGCGG 10
V_RFXDC2_03_M02790 TRANSFAC - 5895473 5895487 9.0E-06 TCTCTTAGCAACAGC 15
V_ASCL2_03_M02737 TRANSFAC + 5891009 5891025 1.0E-05 TGCTGCAGCTGCTAGCG 17
V_YY1_Q6_02_M01035 TRANSFAC - 5894989 5894999 2.0E-06 GCTGCCATTTT 11
V_MEF2_04_M00233 TRANSFAC + 5894556 5894577 3.0E-06 GGGATGTCTAAAAATACAACTG 22
V_CTCF_01_M01200 TRANSFAC - 5890699 5890718 5.0E-06 CGCGCCGCCAGGGGGCAGGG 20
V_SIX2_01_M01433 TRANSFAC + 5893025 5893041 4.0E-06 TTAAAGGTATCATGTGT 17
V_MZF1_02_M00084 TRANSFAC - 5896038 5896050 1.0E-05 GCGGGAGGGGGAA 13
V_LBP9_01_M01592 TRANSFAC - 5894846 5894862 3.0E-06 CCAGAAAAAGCTAGTTC 17
V_NANOG_01_M01123 TRANSFAC + 5895227 5895238 2.0E-06 GGAGCCATTTCC 12
V_STAT1STAT1_Q3_M01212 TRANSFAC + 5895243 5895255 3.0E-06 GTTTCCAAGAAGT 13
V_ZABC1_01_M01306 TRANSFAC - 5896366 5896373 1.0E-05 ATTCCAAC 8
V_SIX4_01_M01374 TRANSFAC - 5893025 5893041 1.0E-06 ACACATGATACCTTTAA 17
V_HSF_Q6_M00641 TRANSFAC + 5895235 5895247 6.0E-06 TTCCAAGAGTTTC 13
V_STAT5A_01_M00457 TRANSFAC - 5895242 5895256 2.0E-06 CACTTCTTGGAAACT 15
V_SIX6_01_M01345 TRANSFAC + 5893025 5893041 2.0E-06 TTAAAGGTATCATGTGT 17
V_MEF2_01_M00006 TRANSFAC + 5894561 5894576 7.0E-06 GTCTAAAAATACAACT 16
V_SP1_Q2_01_M00933 TRANSFAC + 5890886 5890895 7.0E-06 CCCCGCCCCT 10
V_HMEF2_Q6_M00406 TRANSFAC + 5894561 5894576 1.0E-05 GTCTAAAAATACAACT 16
V_TFE_Q6_M01029 TRANSFAC - 5894775 5894782 1.0E-05 TCATGTGA 8
V_PBX1_04_M01357 TRANSFAC - 5894753 5894769 7.0E-06 GCTAACATCAATAAGCA 17
V_STAT1_05_M01260 TRANSFAC - 5895235 5895256 5.0E-06 CACTTCTTGGAAACTCTTGGAA 22
V_STAT1_05_M01260 TRANSFAC + 5895242 5895263 3.0E-06 AGTTTCCAAGAAGTGTCAGGTC 22
V_SOX9_Q4_M01284 TRANSFAC + 5895076 5895086 6.0E-06 ACACAAAGGAA 11
Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns.
Developed at the Institute for Systems Biology in the Baliga Lab.
A Django site.   Powered by PostgreSQL