Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

INF2 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 64423 inverted formin, FH2 and WH2 domain containing chr14 + 105150942 - 105156442 105155942 Transcription Factor Binding Sites   Download all TFBS in the INF2 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints SP8_C2H2_DBD_monomeric_12_1 SELEX + 105154231 105154242 8.0E-06 AACACACCCACT 12 SP8_C2H2_DBD_monomeric_12_1 SELEX - 105155819 105155830 5.0E-06 GCCCCGCCCACT 12 FOXJ2_forkhead_DBD_dimeric_13_1 SELEX + 105154224 105154236 8.0E-06 ATCAACAAACACA 13 Rxrb_nuclearreceptor_DBD_dimeric_14_1 SELEX + 105154173 105154186 4.0E-06 CAGGTCAAAGCTCA 14 Rxrb_nuclearreceptor_DBD_dimeric_14_1 SELEX + 105155136 105155149 1.0E-05 AGGGTCAGACGTCA 14 NFIA_NFI_full_dimeric_15_1 SELEX - 105155173 105155187 9.0E-06 TTGGATGAGAGCCAG 15 KLF16_C2H2_DBD_monomeric_11_1 SELEX + 105155860 105155870 1.0E-05 GCCCCGCCCCC 11 FOXL1_forkhead_full_dimeric_13_1 SELEX + 105154223 105154235 9.0E-06 GATCAACAAACAC 13 RXRG_nuclearreceptor_full_dimeric_14_1 SELEX + 105155136 105155149 3.0E-06 AGGGTCAGACGTCA 14 NR2F6_nuclearreceptor_full_dimeric_14_1 SELEX + 105154173 105154186 3.0E-06 CAGGTCAAAGCTCA 14 Mafb_bZIP_DBD_monomeric_12_1 SELEX + 105151712 105151723 2.0E-06 AAAATGCTGAGA 12 EWSR1-FLI1_MA0149.1 JASPAR + 105154378 105154395 1.0E-06 TGAGGGAGGGCAGGAAGG 18 TEAD1_TEA_full_monomeric_10_1 SELEX + 105154204 105154213 7.0E-06 CACATTCCTC 10 REL_MA0101.1 JASPAR + 105156377 105156386 6.0E-06 CGGGATTTCC 10 Foxc1_forkhead_DBD_dimeric_11_1 SELEX + 105154224 105154234 2.0E-06 ATCAACAAACA 11 RELA_MA0107.1 JASPAR + 105156377 105156386 8.0E-06 CGGGATTTCC 10 SP1_MA0079.2 JASPAR + 105155861 105155870 7.0E-06 CCCCGCCCCC 10 NR2F1_nuclearreceptor_DBD_dimeric_15_1 SELEX + 105154173 105154187 2.0E-06 CAGGTCAAAGCTCAC 15 NR2F1_nuclearreceptor_DBD_dimeric_15_1 SELEX + 105155136 105155150 8.0E-06 AGGGTCAGACGTCAG 15 HNF4A_nuclearreceptor_full_dimeric_16_1 SELEX - 105151675 105151690 3.0E-06 CAGTTCAAACTCCAAG 16 znf143_MA0088.1 JASPAR + 105151743 105151762 7.0E-06 GAAGCCCCAGCAGGCAAAGC 20 SP4_C2H2_full_monomeric_17_1 SELEX - 105155817 105155833 1.0E-06 GTGGCCCCGCCCACTGT 17 SP4_C2H2_full_monomeric_17_1 SELEX + 105155857 105155873 7.0E-06 CAGGCCCCGCCCCCGGC 17 BCL6B_C2H2_DBD_monomeric_17_1 SELEX + 105154457 105154473 3.0E-06 TGCATTCCAAGAATTGC 17 SP1_C2H2_DBD_monomeric_11_1 SELEX - 105155820 105155830 1.0E-05 GCCCCGCCCAC 11 FOXC2_forkhead_DBD_dimeric_11_1 SELEX + 105154224 105154234 3.0E-06 ATCAACAAACA 11 Mycn_MA0104.2 JASPAR + 105155886 105155895 8.0E-06 CCCACGTGGC 10 TEAD3_TEA_DBD_dimeric_17_1 SELEX + 105154458 105154474 0.0E+00 GCATTCCAAGAATTGCA 17 NFIB_NFI_full_dimeric_15_1 SELEX - 105155173 105155187 8.0E-06 TTGGATGAGAGCCAG 15 HNF4A_MA0114.1 JASPAR + 105154174 105154186 7.0E-06 AGGTCAAAGCTCA 13 TEAD1_TEA_full_dimeric_17_1 SELEX + 105154458 105154474 0.0E+00 GCATTCCAAGAATTGCA 17 Sox11_HMG_DBD_dimeric_15_1 SELEX + 105154465 105154479 4.0E-06 AAGAATTGCAGAGTG 15 ETS1_ETS_full_dimeric_18_1 SELEX + 105154387 105154404 3.0E-06 GCAGGAAGGCCTTCTGCT 18 HNF4A_nuclearreceptor_full_dimeric_14_1 SELEX + 105154173 105154186 2.0E-06 CAGGTCAAAGCTCA 14 TEAD4_TEA_DBD_monomeric_10_1 SELEX + 105154204 105154213 9.0E-06 CACATTCCTC 10 MAFK_bZIP_full_monomeric_12_1 SELEX + 105151711 105151722 4.0E-06 CAAAATGCTGAG 12 RXRA_nuclearreceptor_full_dimeric_14_1 SELEX + 105154173 105154186 1.0E-06 CAGGTCAAAGCTCA 14 RXRA_nuclearreceptor_full_dimeric_14_1 SELEX + 105155136 105155149 8.0E-06 AGGGTCAGACGTCA 14 Foxj3_forkhead_DBD_dimeric_13_1 SELEX + 105154224 105154236 4.0E-06 ATCAACAAACACA 13 RREB1_MA0073.1 JASPAR + 105155833 105155852 3.0E-06 CCCCCAGCCACCCACCTCCC 20 Zfx_MA0146.1 JASPAR - 105155857 105155870 8.0E-06 GGGGGCGGGGCCTG 14 V_ELF5_02_M01980 TRANSFAC - 105154603 105154612 5.0E-06 CCCGGAAGTT 10 V_NFKAPPAB65_01_M00052 TRANSFAC + 105156377 105156386 9.0E-06 CGGGATTTCC 10 RXR_RAR_DR5_MA0159.1 JASPAR + 105155570 105155586 6.0E-06 GGGGCAGAGAGAGGTGA 17 V_MEIS1BHOXA9_02_M00421 TRANSFAC - 105160881 105160894 2.0E-06 TGACAGATTGACGA 14 V_AP2ALPHA_Q6_M01857 TRANSFAC + 105155864 105155874 6.0E-06 CGCCCCCGGCC 11 V_AREB6_03_M00414 TRANSFAC - 105154450 105154461 7.0E-06 ATGCACCTGGAA 12 V_BACH2_01_M00490 TRANSFAC + 105154279 105154289 7.0E-06 GATGAGTCAGC 11 V_ZFX_01_M01593 TRANSFAC + 105155854 105155869 2.0E-06 CCCCAGGCCCCGCCCC 16 V_STAT_Q6_M00777 TRANSFAC - 105154462 105154474 8.0E-06 TGCAATTCTTGGA 13 V_SP1_Q6_01_M00931 TRANSFAC - 105155860 105155869 4.0E-06 GGGGCGGGGC 10 V_ELF1_01_M01975 TRANSFAC - 105154603 105154612 8.0E-06 CCCGGAAGTT 10 V_MEIS1AHOXA9_01_M00420 TRANSFAC - 105160881 105160894 0.0E+00 TGACAGATTGACGA 14 V_HNF4ALPHA_Q6_M00638 TRANSFAC - 105154175 105154187 3.0E-06 GTGAGCTTTGACC 13 V_P50P50_Q3_M01223 TRANSFAC + 105155151 105155163 3.0E-06 AAGGGACTTCCAG 13 V_EAR2_Q2_M01728 TRANSFAC - 105154173 105154186 1.0E-06 TGAGCTTTGACCTG 14 V_EAR2_Q2_M01728 TRANSFAC - 105154706 105154719 2.0E-06 TGTCCTTTGGCTTT 14 V_AP2_Q6_01_M00915 TRANSFAC + 105155850 105155862 1.0E-06 CCCCCCCCAGGCC 13 V_STAT5B_01_M00459 TRANSFAC - 105154458 105154472 8.0E-06 CAATTCTTGGAATGC 15 V_SP1_03_M02281 TRANSFAC + 105155861 105155870 7.0E-06 CCCCGCCCCC 10 V_HNF4A_03_M02220 TRANSFAC + 105154174 105154186 7.0E-06 AGGTCAAAGCTCA 13 V_NERF_Q2_M00531 TRANSFAC - 105155109 105155126 2.0E-06 CTGCAGGAAGCAGCGCAC 18 V_STAT4_Q4_M01666 TRANSFAC + 105154461 105154474 0.0E+00 TTCCAAGAATTGCA 14 V_AP1_Q6_M00174 TRANSFAC - 105154279 105154289 1.0E-05 GCTGACTCATC 11 V_ELF2_02_M02054 TRANSFAC - 105154603 105154612 4.0E-06 CCCGGAAGTT 10 V_GC_01_M00255 TRANSFAC + 105155819 105155832 8.0E-06 AGTGGGCGGGGCCA 14 V_GC_01_M00255 TRANSFAC - 105155858 105155871 5.0E-06 CGGGGGCGGGGCCT 14 V_HNF3G_Q4_M02015 TRANSFAC - 105154227 105154234 7.0E-06 TGTTTGTT 8 V_HNF4_01_B_M00411 TRANSFAC + 105154173 105154187 2.0E-06 CAGGTCAAAGCTCAC 15 V_CREL_01_M00053 TRANSFAC + 105156377 105156386 6.0E-06 CGGGATTTCC 10 V_KROX_Q6_M00982 TRANSFAC + 105155862 105155875 5.0E-06 CCCGCCCCCGGCCC 14 V_SP1_Q6_M00196 TRANSFAC + 105155819 105155831 2.0E-06 AGTGGGCGGGGCC 13 V_SP1_Q6_M00196 TRANSFAC - 105155859 105155871 1.0E-06 CGGGGGCGGGGCC 13 V_AP2BETA_Q3_M01858 TRANSFAC - 105155852 105155867 8.0E-06 GGCGGGGCCTGGGGGG 16 V_HNF3_Q6_M00791 TRANSFAC + 105154224 105154236 4.0E-06 ATCAACAAACACA 13 V_EHF_02_M01974 TRANSFAC - 105154603 105154612 8.0E-06 CCCGGAAGTT 10 V_ASCL2_03_M02737 TRANSFAC + 105154567 105154583 5.0E-06 GCCTGCAGCTGCTCCTG 17 V_AP1_C_M00199 TRANSFAC + 105154280 105154288 3.0E-06 ATGAGTCAG 9 V_HNF4_DR1_Q3_M00764 TRANSFAC - 105154174 105154186 1.0E-06 TGAGCTTTGACCT 13 V_HNF4_DR1_Q3_M00764 TRANSFAC - 105154707 105154719 8.0E-06 TGTCCTTTGGCTT 13 V_MYCN_01_M02259 TRANSFAC + 105155886 105155895 8.0E-06 CCCACGTGGC 10 V_AP1_01_M00517 TRANSFAC + 105154278 105154290 5.0E-06 AGATGAGTCAGCC 13 V_CTCF_01_M01200 TRANSFAC + 105155745 105155764 5.0E-06 GGGACCGCGAGGGGGCGGCC 20 V_ELF4_01_M01979 TRANSFAC - 105154603 105154612 8.0E-06 CCCGGAAGTT 10 V_SP4_Q5_M01273 TRANSFAC - 105155820 105155830 9.0E-06 GCCCCGCCCAC 11 V_SP4_Q5_M01273 TRANSFAC + 105155860 105155870 1.0E-06 GCCCCGCCCCC 11 V_MYF6_04_M02885 TRANSFAC + 105154224 105154238 5.0E-06 ATCAACAAACACACC 15 V_DR1_Q3_M00762 TRANSFAC + 105154174 105154186 1.0E-06 AGGTCAAAGCTCA 13 V_CAAT_C_M00200 TRANSFAC + 105154193 105154217 2.0E-06 ACCAACCTCCTCACATTCCTCCATT 25 V_CAAT_C_M00200 TRANSFAC + 105155092 105155116 8.0E-06 CCCAAACCCCAGGCCTGGTGCGCTG 25 NR1H2_RXRA_MA0115.1 JASPAR + 105154172 105154188 8.0E-06 GCAGGTCAAAGCTCACT 17 V_TEF1_Q6_03_M01817 TRANSFAC - 105154205 105154213 3.0E-06 GAGGAATGT 9 V_PXR_Q2_M00964 TRANSFAC - 105154882 105154893 6.0E-06 AGGGTCAAGAAC 12 V_AIRE_01_M00999 TRANSFAC + 105160854 105160879 5.0E-06 TTATGCACTGGCATTACAGGTGGCAT 26 V_RXR_RAR_01_M02272 TRANSFAC + 105155570 105155586 6.0E-06 GGGGCAGAGAGAGGTGA 17 V_ZFP281_04_M02831 TRANSFAC + 105155843 105155857 6.0E-06 CCCACCTCCCCCCCC 15 V_HFH3_01_M00289 TRANSFAC - 105154225 105154237 6.0E-06 GTGTGTTTGTTGA 13 V_EWSR1FLI1_01_M02252 TRANSFAC + 105154378 105154395 1.0E-06 TGAGGGAGGGCAGGAAGG 18 V_VMAF_01_M00035 TRANSFAC - 105154587 105154605 7.0E-06 GTTTGCTGGCTCAGCCCCA 19 V_DR3_Q4_M00966 TRANSFAC - 105154380 105154400 4.0E-06 GAAGGCCTTCCTGCCCTCCCT 21 V_SP1_Q2_01_M00933 TRANSFAC + 105155861 105155870 4.0E-06 CCCCGCCCCC 10 V_RXRLXRB_01_M01198 TRANSFAC + 105154174 105154186 0.0E+00 AGGTCAAAGCTCA 13 V_SP1_Q4_01_M00932 TRANSFAC + 105155819 105155831 0.0E+00 AGTGGGCGGGGCC 13 V_SP1_Q4_01_M00932 TRANSFAC - 105155859 105155871 1.0E-06 CGGGGGCGGGGCC 13 V_ZIC1_05_M02939 TRANSFAC + 105154820 105154834 6.0E-06 CCACACAGCAGGCCC 15 V_TR4_03_M01782 TRANSFAC + 105154174 105154186 0.0E+00 AGGTCAAAGCTCA 13 V_TR4_03_M01782 TRANSFAC + 105155137 105155149 3.0E-06 GGGTCAGACGTCA 13 V_PPARG_01_M00512 TRANSFAC + 105154170 105154190 5.0E-06 CTGCAGGTCAAAGCTCACTCC 21

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.