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CDH22


EntrezDescriptionChrom.StrandPromoter
(Start - Stop)
TSS
64405 cadherin 22, type 2 chr20 -44936637 - 44942137 44937137

Transcription Factor Binding Sites

 
Download all TFBS in the CDH22 promoter
 
MotifSourceStrandStartStop PValueMatch
Sequence
Overlap w/
Footprints
CTCF_MA0139.1 JASPAR + 44935860 44935878 5.0E-06 CCGCCACAAGGGGGTGCCC 19
VSX1_homeodomain_full_monomeric_11_1 SELEX - 44934369 44934379 5.0E-06 AGCCAATTAAA 11
FOXL1_forkhead_full_dimeric_13_1 SELEX + 44934398 44934410 8.0E-06 GGTAAATAAACTG 13
EWSR1-FLI1_MA0149.1 JASPAR - 44937164 44937181 1.0E-06 GGGAGGAAGGAAGGGATC 18
EWSR1-FLI1_MA0149.1 JASPAR - 44941086 44941103 1.0E-05 GGAGGGAAGGGAGGGGAA 18
EWSR1-FLI1_MA0149.1 JASPAR - 44941090 44941107 1.0E-06 GAAGGGAGGGAAGGGAGG 18
MSX1_homeodomain_full_monomeric_8_1 SELEX - 44934370 44934377 7.0E-06 CCAATTAA 8
MSX2_homeodomain_DBD_monomeric_8_1 SELEX - 44934370 44934377 7.0E-06 CCAATTAA 8
Foxc1_forkhead_DBD_dimeric_11_1 SELEX + 44934399 44934409 6.0E-06 GTAAATAAACT 11
RAX_homeodomain_DBD_monomeric_10_1 SELEX - 44934369 44934378 8.0E-06 GCCAATTAAA 10
FOXC2_forkhead_DBD_dimeric_11_1 SELEX + 44934399 44934409 2.0E-06 GTAAATAAACT 11
MZF1_5-13_MA0057.1 JASPAR + 44934334 44934343 4.0E-06 GGAGGGGGAA 10
BSX_homeodomain_DBD_monomeric_8_1 SELEX - 44934370 44934377 7.0E-06 CCAATTAA 8
Msx3_homeodomain_DBD_monomeric_8_1 SELEX - 44934370 44934377 7.0E-06 CCAATTAA 8
LBX2_homeodomain_DBD_monomeric_10_1 SELEX - 44934369 44934378 6.0E-06 GCCAATTAAA 10
PLAG1_MA0163.1 JASPAR - 44941330 44941343 9.0E-06 GGGTCCCTCTGGGG 14
V_MSX3_01_M01341 TRANSFAC - 44934367 44934382 7.0E-06 GTCAGCCAATTAAACT 16
V_ATF5_01_M01295 TRANSFAC - 44936172 44936182 1.0E-06 TCTCTTCCTTA 11
V_ZFP410_04_M02936 TRANSFAC - 44934327 44934343 2.0E-06 TTCCCCCTCCCCTTTTT 17
V_FOXA2_04_M02749 TRANSFAC + 44934394 44934410 7.0E-06 ATGTGGTAAATAAACTG 17
V_DEAF1_01_M01001 TRANSFAC - 44936328 44936352 4.0E-06 CCGCGTCCGGGGACACCCGGAGGCT 25
V_SPIB_02_M02041 TRANSFAC + 44934361 44934370 8.0E-06 AGAGGAAGTT 10
V_HOXA13_02_M01297 TRANSFAC + 44939873 44939881 4.0E-06 AAATAAAAT 9
V_MAF_Q6_M00648 TRANSFAC + 44937141 44937156 0.0E+00 TGGGGGGAAGTGTGCA 16
V_HOXD13_01_M01404 TRANSFAC - 44934365 44934380 9.0E-06 CAGCCAATTAAACTTC 16
V_RPC155_01_M01798 TRANSFAC + 44937477 44937492 5.0E-06 GCCGCAGTTTGAGACC 16
V_MTERF_01_M01245 TRANSFAC - 44934416 44934429 9.0E-06 TGGCAAAGTTCGGA 14
V_SPI1_03_M02078 TRANSFAC + 44934361 44934370 2.0E-06 AGAGGAAGTT 10
V_CEBPE_Q6_M01868 TRANSFAC - 44939850 44939863 8.0E-06 CAATATTGCACAAC 14
V_HOXB13_01_M01467 TRANSFAC - 44934365 44934380 3.0E-06 CAGCCAATTAAACTTC 16
V_NKX26_01_M01322 TRANSFAC - 44934366 44934381 4.0E-06 TCAGCCAATTAAACTT 16
V_HES1_Q2_M01009 TRANSFAC + 44933204 44933218 5.0E-06 AAGGCTTGTGGGTCT 15
V_CEBPB_02_M00117 TRANSFAC - 44939848 44939861 0.0E+00 ATATTGCACAACAG 14
V_CTCF_02_M01259 TRANSFAC + 44935857 44935876 5.0E-06 TGCCCGCCACAAGGGGGTGC 20
V_CTCF_01_M01200 TRANSFAC + 44935859 44935878 2.0E-06 CCCGCCACAAGGGGGTGCCC 20
V_MZF1_02_M00084 TRANSFAC + 44934331 44934343 6.0E-06 AGGGGAGGGGGAA 13
V_GATA4_Q3_M00632 TRANSFAC + 44934325 44934336 3.0E-06 AGAAAAAGGGGA 12
V_GR_Q6_02_M01836 TRANSFAC - 44934341 44934353 7.0E-06 CTCTCTGTTCTTC 13
V_NKX25_03_M01414 TRANSFAC - 44934366 44934381 8.0E-06 TCAGCCAATTAAACTT 16
V_CEBPA_01_M00116 TRANSFAC - 44939848 44939861 8.0E-06 ATATTGCACAACAG 14
V_SPIC_02_M02077 TRANSFAC + 44934361 44934370 1.0E-06 AGAGGAAGTT 10
V_PLZF_02_M01075 TRANSFAC + 44939887 44939915 7.0E-06 GTGCTTTGTAGTTAGAGTTTGAACGTGTG 29
V_CEBPB_Q6_M01896 TRANSFAC + 44939851 44939860 1.0E-06 TTGTGCAATA 10
V_EWSR1FLI1_01_M02252 TRANSFAC - 44937164 44937181 1.0E-06 GGGAGGAAGGAAGGGATC 18
V_EWSR1FLI1_01_M02252 TRANSFAC - 44941086 44941103 1.0E-05 GGAGGGAAGGGAGGGGAA 18
V_EWSR1FLI1_01_M02252 TRANSFAC - 44941090 44941107 1.0E-06 GAAGGGAGGGAAGGGAGG 18
V_SMAD3_Q6_M00701 TRANSFAC + 44937133 44937141 6.0E-06 TGTCTGACT 9
V_ALX3_01_M01355 TRANSFAC + 44934366 44934382 1.0E-05 AAGTTTAATTGGCTGAC 17
V_ALX3_02_M02943 TRANSFAC + 44934366 44934382 1.0E-05 AAGTTTAATTGGCTGAC 17
V_FOXK1_03_M02752 TRANSFAC + 44934394 44934410 1.0E-05 ATGTGGTAAATAAACTG 17
V_SPI1_02_M02043 TRANSFAC + 44934361 44934370 6.0E-06 AGAGGAAGTT 10
V_SPIB_03_M02076 TRANSFAC + 44934361 44934370 2.0E-06 AGAGGAAGTT 10
V_CEBPA_Q6_M01866 TRANSFAC + 44939848 44939860 7.0E-06 CTGTTGTGCAATA 13
V_NKX21_01_M01312 TRANSFAC - 44934366 44934381 3.0E-06 TCAGCCAATTAAACTT 16
Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns.
Developed at the Institute for Systems Biology in the Baliga Lab.
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