Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 643669 uncharacterized LOC643669 chr19 - 39402298 - 39407798 39402798 Transcription Factor Binding Sites   Download all TFBS in the promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints POU4F2_POU_full_monomeric_16_1 SELEX - 39402952 39402967 4.0E-06 ATGAATAATTGAGGGT 16 IRF7_IRF_DBD_dimeric_14_1 SELEX - 39403042 39403055 6.0E-06 AAAAAAACGAAAAA 14 POU3F3_POU_DBD_monomeric_12_1 SELEX - 39402956 39402967 3.0E-06 ATGAATAATTGA 12 POU3F2_POU_DBD_monomeric_13_1 SELEX - 39402956 39402968 3.0E-06 CATGAATAATTGA 13 POU3F4_POU_DBD_monomeric_11_1 SELEX - 39402956 39402966 9.0E-06 TGAATAATTGA 11 MAX_bHLH_DBD_dimeric_10_1 SELEX + 39403792 39403801 8.0E-06 ACCACGTGCC 10 HOMEZ_HOMEZ_DBD_monomer-or-dimer_12_1 SELEX - 39403041 39403052 2.0E-06 AAAACGAAAAAA 12 POU4F3_POU_DBD_monomeric_16_1 SELEX - 39402952 39402967 4.0E-06 ATGAATAATTGAGGGT 16 POU4F3_POU_DBD_monomeric_16_1 SELEX + 39402955 39402970 2.0E-06 CTCAATTATTCATGAG 16 MNT_bHLH_DBD_dimeric_10_1 SELEX + 39403792 39403801 7.0E-06 ACCACGTGCC 10 POU1F1_POU_DBD_monomeric_17_1 SELEX - 39402954 39402970 0.0E+00 CTCATGAATAATTGAGG 17 POU3F1_POU_DBD_monomeric_12_2 SELEX - 39402956 39402967 1.0E-06 ATGAATAATTGA 12 Foxj3_forkhead_DBD_dimeric_13_1 SELEX - 39403041 39403053 3.0E-06 AAAAACGAAAAAA 13 POU4F1_POU_DBD_monomeric_14_1 SELEX - 39402954 39402967 1.0E-06 ATGAATAATTGAGG 14 POU4F1_POU_DBD_monomeric_14_1 SELEX + 39402955 39402968 4.0E-06 CTCAATTATTCATG 14 V_YY1_02_M00069 TRANSFAC - 39403015 39403034 6.0E-06 CCTCCACCATCTGCGCTGAG 20 V_POU1F1_Q6_M00744 TRANSFAC - 39402958 39402967 0.0E+00 ATGAATAATT 10 MYC_MAX_MA0059.1 JASPAR - 39403792 39403802 9.0E-06 TGGCACGTGGT 11 V_MTF1_06_M02882 TRANSFAC - 39403040 39403053 5.0E-06 AAAAACGAAAAAAG 14 V_ARP1_01_M00155 TRANSFAC - 39403003 39403018 6.0E-06 TGAGCTCCTGGCCTGA 16

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.